BLASTX nr result

ID: Cnidium21_contig00010013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010013
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196914.1| ABC transporter I family member 11 [Arabidopsis...   332   8e-89
ref|XP_002873647.1| non-intrinsic abc protein 14 [Arabidopsis ly...   330   2e-88
ref|XP_002512910.1| metal abc transporter, putative [Ricinus com...   319   5e-85
dbj|BAB08289.1| unnamed protein product [Arabidopsis thaliana]        318   7e-85
ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|2...   318   7e-85

>ref|NP_196914.1| ABC transporter I family member 11 [Arabidopsis thaliana]
           gi|75330013|sp|Q8LEF6.1|AB11I_ARATH RecName: Full=ABC
           transporter I family member 11, chloroplastic; Short=ABC
           transporter ABCI.11; Short=AtABCI11; AltName:
           Full=Non-intrinsic ABC protein 14; Flags: Precursor
           gi|21553579|gb|AAM62672.1| contains similarity to ABC
           transporter, ATP-binding protein [Arabidopsis thaliana]
           gi|26452494|dbj|BAC43332.1| unknown protein [Arabidopsis
           thaliana] gi|29824157|gb|AAP04039.1| putative ABC
           transporter family protein [Arabidopsis thaliana]
           gi|332004604|gb|AED91987.1| ABC transporter I family
           member 11 [Arabidopsis thaliana]
          Length = 278

 Score =  332 bits (850), Expect = 8e-89
 Identities = 166/238 (69%), Positives = 192/238 (80%), Gaps = 1/238 (0%)
 Frame = -3

Query: 793 LKFRYTR-PLYVSCDYSRFEIRDVSYRPPGTQTNILSGVSLSLTERSFGLIFGRSGSGKS 617
           L+FR T+ P  +SCDYS  E+RDV YRPPGTQ NIL+GV+ SL E+SFGLIFG+SGSGK+
Sbjct: 33  LRFRRTKKPRVISCDYSCIEVRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSGKT 92

Query: 616 TLLQLIAGLSKPTSGSICIQRFRDDGSPHQSPIFSSPERVGIVFQFPERYFLADNILDEV 437
           TLLQL+AGL+KPTSGSICIQ + DDG P   P     E+VGIVFQFPER+F+ADN+LDE+
Sbjct: 93  TLLQLLAGLNKPTSGSICIQGYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLDEI 152

Query: 436 TFGWPRQKASLPLKEHLASRLQRAISSVGLSGISLDKDPRSLSGGYKRRLALAIQLVQSP 257
           TFGWPRQK SL LKE L S LQRA + VGL  I LDKDP+ LSGGYKRRLALAIQLVQ+P
Sbjct: 153 TFGWPRQKGSLQLKEQLTSNLQRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTP 212

Query: 256 DLLVLDEPLAGLDWKARADXXXXXXXXXXXVTILVVSHDLQEMAALVDQSWHMYMGGM 83
           DLL+LDEPLAGLDWKARAD           +T+LVVSHDL+E+AALVDQSW M  GG+
Sbjct: 213 DLLILDEPLAGLDWKARADVAKLLKHLKKELTLLVVSHDLRELAALVDQSWRMETGGV 270


>ref|XP_002873647.1| non-intrinsic abc protein 14 [Arabidopsis lyrata subsp. lyrata]
           gi|297319484|gb|EFH49906.1| non-intrinsic abc protein 14
           [Arabidopsis lyrata subsp. lyrata]
          Length = 278

 Score =  330 bits (847), Expect = 2e-88
 Identities = 164/234 (70%), Positives = 188/234 (80%)
 Frame = -3

Query: 784 RYTRPLYVSCDYSRFEIRDVSYRPPGTQTNILSGVSLSLTERSFGLIFGRSGSGKSTLLQ 605
           R  +P  +SCDYS  E+RDV YRPPGTQ NIL+GV+ SL ERSFGLIFG+SGSGK+TLLQ
Sbjct: 37  RKKKPRVISCDYSCIEVRDVCYRPPGTQLNILNGVNFSLRERSFGLIFGKSGSGKTTLLQ 96

Query: 604 LIAGLSKPTSGSICIQRFRDDGSPHQSPIFSSPERVGIVFQFPERYFLADNILDEVTFGW 425
           L+AGL+KPTSGSICIQR+ DDG P   P     E+VGIVFQFPER+F+ADN+LDE+TFGW
Sbjct: 97  LLAGLNKPTSGSICIQRYGDDGQPKAVPELLPTEKVGIVFQFPERFFVADNVLDEITFGW 156

Query: 424 PRQKASLPLKEHLASRLQRAISSVGLSGISLDKDPRSLSGGYKRRLALAIQLVQSPDLLV 245
           PRQK SL LKE L S L RA + VGL  I LDKDP+ LSGGYKRRLALAIQLVQ+PDLL+
Sbjct: 157 PRQKGSLQLKEQLTSNLHRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLI 216

Query: 244 LDEPLAGLDWKARADXXXXXXXXXXXVTILVVSHDLQEMAALVDQSWHMYMGGM 83
           LDEPLAGLDWKARAD           +T+LVVSHDL+E+AALVDQSW M  GG+
Sbjct: 217 LDEPLAGLDWKARADVAKLLKHLKKELTLLVVSHDLRELAALVDQSWRMETGGV 270


>ref|XP_002512910.1| metal abc transporter, putative [Ricinus communis]
           gi|223547921|gb|EEF49413.1| metal abc transporter,
           putative [Ricinus communis]
          Length = 238

 Score =  319 bits (817), Expect = 5e-85
 Identities = 160/217 (73%), Positives = 184/217 (84%)
 Frame = -3

Query: 736 IRDVSYRPPGTQTNILSGVSLSLTERSFGLIFGRSGSGKSTLLQLIAGLSKPTSGSICIQ 557
           ++DVSYRPPGTQ N+L+GVS SL E+SFGLIFG+SGSGK+TLLQL+AGLS+PTSGSICIQ
Sbjct: 13  LKDVSYRPPGTQLNLLNGVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGLSEPTSGSICIQ 72

Query: 556 RFRDDGSPHQSPIFSSPERVGIVFQFPERYFLADNILDEVTFGWPRQKASLPLKEHLASR 377
           ++ +DG+P QSP   S ERVGIVFQFPERYF+AD ILDEV FGWPRQK SL LKEHLA  
Sbjct: 73  KYGNDGNPCQSPKPLSHERVGIVFQFPERYFVADTILDEVIFGWPRQKGSLQLKEHLALN 132

Query: 376 LQRAISSVGLSGISLDKDPRSLSGGYKRRLALAIQLVQSPDLLVLDEPLAGLDWKARADX 197
           LQ+AI+ VGL+GISL KDP SLSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDW+ARAD 
Sbjct: 133 LQKAITWVGLNGISLGKDPHSLSGGYKRRLALAIQLVQVPDLLILDEPLAGLDWRARADV 192

Query: 196 XXXXXXXXXXVTILVVSHDLQEMAALVDQSWHMYMGG 86
                     +T+L+VSHDL+E+AALVD SW M MGG
Sbjct: 193 VKLLKQLKKELTVLIVSHDLKELAALVDHSWRMEMGG 229


>dbj|BAB08289.1| unnamed protein product [Arabidopsis thaliana]
          Length = 270

 Score =  318 bits (816), Expect = 7e-85
 Identities = 162/238 (68%), Positives = 188/238 (78%), Gaps = 1/238 (0%)
 Frame = -3

Query: 793 LKFRYTR-PLYVSCDYSRFEIRDVSYRPPGTQTNILSGVSLSLTERSFGLIFGRSGSGKS 617
           L+FR T+ P  +SCDYS  E+RDV YRPPGTQ NIL+GV+ SL E+SFGLIFG+SGSGK+
Sbjct: 33  LRFRRTKKPRVISCDYSCIEVRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSGKT 92

Query: 616 TLLQLIAGLSKPTSGSICIQRFRDDGSPHQSPIFSSPERVGIVFQFPERYFLADNILDEV 437
           TLLQL+AGL+KPTSGSICIQ + DDG P   P     E+VGIVFQFPER+F+ADN+LDE+
Sbjct: 93  TLLQLLAGLNKPTSGSICIQGYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLDEI 152

Query: 436 TFGWPRQKASLPLKEHLASRLQRAISSVGLSGISLDKDPRSLSGGYKRRLALAIQLVQSP 257
           TFGWPRQK SL LKE L        +SVGL  I LDKDP+ LSGGYKRRLALAIQLVQ+P
Sbjct: 153 TFGWPRQKGSLQLKEQL--------TSVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTP 204

Query: 256 DLLVLDEPLAGLDWKARADXXXXXXXXXXXVTILVVSHDLQEMAALVDQSWHMYMGGM 83
           DLL+LDEPLAGLDWKARAD           +T+LVVSHDL+E+AALVDQSW M  GG+
Sbjct: 205 DLLILDEPLAGLDWKARADVAKLLKHLKKELTLLVVSHDLRELAALVDQSWRMETGGV 262


>ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|222839311|gb|EEE77648.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  318 bits (816), Expect = 7e-85
 Identities = 156/217 (71%), Positives = 186/217 (85%)
 Frame = -3

Query: 736 IRDVSYRPPGTQTNILSGVSLSLTERSFGLIFGRSGSGKSTLLQLIAGLSKPTSGSICIQ 557
           ++DVSYRPPGT+ N+L+ V+ SL ERSFGLIFG+SGSGK+TLLQL++G+SKPTSGSIC+Q
Sbjct: 9   VKDVSYRPPGTELNLLNKVTFSLPERSFGLIFGQSGSGKTTLLQLLSGISKPTSGSICVQ 68

Query: 556 RFRDDGSPHQSPIFSSPERVGIVFQFPERYFLADNILDEVTFGWPRQKASLPLKEHLASR 377
           R+ +DG+P+Q P   SPE+VGIVFQFPERYF+AD I DEVTFGWPR+K+S+ L+EHLA  
Sbjct: 69  RYGNDGNPNQLPEQLSPEKVGIVFQFPERYFVADTIADEVTFGWPRRKSSVQLREHLALN 128

Query: 376 LQRAISSVGLSGISLDKDPRSLSGGYKRRLALAIQLVQSPDLLVLDEPLAGLDWKARADX 197
           LQRA++ VGL+GISLDKDP SLSGGYKRRLALAIQLV+ PDLL+LDEPLAGLDWKARAD 
Sbjct: 129 LQRAVNWVGLNGISLDKDPHSLSGGYKRRLALAIQLVEVPDLLILDEPLAGLDWKARADV 188

Query: 196 XXXXXXXXXXVTILVVSHDLQEMAALVDQSWHMYMGG 86
                     +TILVVSHDL+E+AALVD SW M MGG
Sbjct: 189 VKLLKHLKKELTILVVSHDLKELAALVDHSWRMEMGG 225


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