BLASTX nr result

ID: Cnidium21_contig00010010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010010
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29412.3| unnamed protein product [Vitis vinifera]               67   3e-13
ref|XP_003635008.1| PREDICTED: DNA replication licensing factor ...    67   6e-13
emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]    67   6e-13
gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum s...    72   5e-11
ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>emb|CBI29412.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score = 67.0 bits (162), Expect(2) = 3e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = -3

Query: 474 VILTSTVIVIPDIMTLASPRE*AEGRR*ASQIEGRRE-LGGVKGFRA*GVRDLYYRLAFI 298
           VI T TV+VIPDI  LASP E AE RR A Q +       GV+G RA GVRDL YRLAFI
Sbjct: 239 VIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRALGVRDLSYRLAFI 298

Query: 297 ANSVHLT 277
           ANSV ++
Sbjct: 299 ANSVQIS 305



 Score = 32.7 bits (73), Expect(2) = 3e-13
 Identities = 12/22 (54%), Positives = 20/22 (90%)
 Frame = -2

Query: 160 KASNIRHRKRDAEDDDNQEFTV 95
           + ++IR+RK+DA++DDNQ+F V
Sbjct: 309 READIRNRKKDADEDDNQQFMV 330


>ref|XP_003635008.1| PREDICTED: DNA replication licensing factor MCM6 [Vitis vinifera]
          Length = 812

 Score = 67.0 bits (162), Expect(2) = 6e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = -3

Query: 474 VILTSTVIVIPDIMTLASPRE*AEGRR*ASQIEGRRE-LGGVKGFRA*GVRDLYYRLAFI 298
           VI T TV+VIPDI  LASP E AE RR A Q +       GV+G RA GVRDL YRLAFI
Sbjct: 239 VIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRALGVRDLSYRLAFI 298

Query: 297 ANSVHLT 277
           ANSV ++
Sbjct: 299 ANSVQIS 305



 Score = 31.6 bits (70), Expect(2) = 6e-13
 Identities = 11/20 (55%), Positives = 19/20 (95%)
 Frame = -2

Query: 160 KASNIRHRKRDAEDDDNQEF 101
           + ++IR+RK+DA++DDNQ+F
Sbjct: 309 READIRNRKKDADEDDNQQF 328


>emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]
          Length = 807

 Score = 67.0 bits (162), Expect(2) = 6e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = -3

Query: 474 VILTSTVIVIPDIMTLASPRE*AEGRR*ASQIEGRRE-LGGVKGFRA*GVRDLYYRLAFI 298
           VI T TV+VIPDI  LASP E AE RR A Q +       GV+G RA GVRDL YRLAFI
Sbjct: 239 VIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRALGVRDLSYRLAFI 298

Query: 297 ANSVHLT 277
           ANSV ++
Sbjct: 299 ANSVQIS 305



 Score = 31.6 bits (70), Expect(2) = 6e-13
 Identities = 11/20 (55%), Positives = 19/20 (95%)
 Frame = -2

Query: 160 KASNIRHRKRDAEDDDNQEF 101
           + ++IR+RK+DA++DDNQ+F
Sbjct: 309 READIRNRKKDADEDDNQQF 328


>gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum sativum]
          Length = 827

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/66 (65%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
 Frame = -3

Query: 474 VILTSTVIVIPDIMTLASPRE*AEGRR*ASQIEGRRELG-GVKGFRA*GVRDLYYRLAFI 298
           VI T TVIVIPDI+ LASP E +E RR ASQ +G      GV+G RA GVRDL YRLAFI
Sbjct: 238 VIFTGTVIVIPDILALASPGERSECRREASQRKGSSSGNEGVRGLRALGVRDLSYRLAFI 297

Query: 297 ANSVHL 280
           ANSV +
Sbjct: 298 ANSVQI 303


>ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|222846637|gb|EEE84184.1|
           predicted protein [Populus trichocarpa]
          Length = 842

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = -3

Query: 474 VILTSTVIVIPDIMTLASPRE*AEGRR*ASQIEGRRELG-GVKGFRA*GVRDLYYRLAFI 298
           VI T TV+V+PDI+ LASP E AE RR +SQ++     G GV+G RA GVRDL YRLAFI
Sbjct: 242 VIFTGTVVVVPDILALASPGERAECRRESSQLKNSAVGGEGVRGLRALGVRDLSYRLAFI 301

Query: 297 ANSVHL 280
           ANSV +
Sbjct: 302 ANSVQV 307


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