BLASTX nr result
ID: Cnidium21_contig00010003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00010003 (606 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003556164.1| PREDICTED: protein GIGANTEA-like isoform 1 [... 133 2e-29 dbj|BAJ22595.1| GIGANTEA [Glycine max] 133 2e-29 ref|XP_002524341.1| Protein GIGANTEA, putative [Ricinus communis... 130 1e-28 ref|NP_001239995.1| uncharacterized protein LOC100800578 [Glycin... 129 4e-28 ref|XP_003592048.1| Protein GIGANTEA [Medicago truncatula] gi|35... 126 3e-27 >ref|XP_003556164.1| PREDICTED: protein GIGANTEA-like isoform 1 [Glycine max] gi|168480791|gb|ACA24489.1| gigantea-like protein 1 [Glycine max] Length = 1175 Score = 133 bits (335), Expect = 2e-29 Identities = 64/89 (71%), Positives = 72/89 (80%) Frame = -1 Query: 606 SHPSAHVRALSISVLRAILQAGLIHSGSKQVEINSIHNPAYQYLNVDIIDCQADIEKCLT 427 SHPSAHVRALSISVLR IL G I K +N HNP+YQY N+D+ID QADIEKCLT Sbjct: 1087 SHPSAHVRALSISVLRDILHTGSIRCSPKPRRLNGTHNPSYQYFNLDVIDWQADIEKCLT 1146 Query: 426 WEAHSRLSSGMHMQFLDTAAKELGCTISV 340 WEAHSRLS+G+ + FLDTAAKELGCTIS+ Sbjct: 1147 WEAHSRLSNGLSINFLDTAAKELGCTISM 1175 >dbj|BAJ22595.1| GIGANTEA [Glycine max] Length = 1168 Score = 133 bits (335), Expect = 2e-29 Identities = 64/89 (71%), Positives = 72/89 (80%) Frame = -1 Query: 606 SHPSAHVRALSISVLRAILQAGLIHSGSKQVEINSIHNPAYQYLNVDIIDCQADIEKCLT 427 SHPSAHVRALSISVLR IL G I K +N HNP+YQY N+D+ID QADIEKCLT Sbjct: 1080 SHPSAHVRALSISVLRDILHTGSIRCSPKPRRLNGTHNPSYQYFNLDVIDWQADIEKCLT 1139 Query: 426 WEAHSRLSSGMHMQFLDTAAKELGCTISV 340 WEAHSRLS+G+ + FLDTAAKELGCTIS+ Sbjct: 1140 WEAHSRLSNGLSINFLDTAAKELGCTISM 1168 >ref|XP_002524341.1| Protein GIGANTEA, putative [Ricinus communis] gi|223536432|gb|EEF38081.1| Protein GIGANTEA, putative [Ricinus communis] Length = 1161 Score = 130 bits (328), Expect = 1e-28 Identities = 62/89 (69%), Positives = 72/89 (80%) Frame = -1 Query: 606 SHPSAHVRALSISVLRAILQAGLIHSGSKQVEINSIHNPAYQYLNVDIIDCQADIEKCLT 427 SHPSAHVRA+S SVLR IL G I S +V+IN I P+YQY N+D+ D Q DIEKCLT Sbjct: 1073 SHPSAHVRAVSTSVLRGILYTGSIKRTSNRVDINGIRGPSYQYFNIDVTDWQTDIEKCLT 1132 Query: 426 WEAHSRLSSGMHMQFLDTAAKELGCTISV 340 WEAHSRL++GM +QFLDTAAKELGCTIS+ Sbjct: 1133 WEAHSRLATGMPIQFLDTAAKELGCTISI 1161 >ref|NP_001239995.1| uncharacterized protein LOC100800578 [Glycine max] gi|308198907|dbj|BAJ22594.1| GIGANTEA [Glycine max] Length = 1170 Score = 129 bits (324), Expect = 4e-28 Identities = 62/89 (69%), Positives = 70/89 (78%) Frame = -1 Query: 606 SHPSAHVRALSISVLRAILQAGLIHSGSKQVEINSIHNPAYQYLNVDIIDCQADIEKCLT 427 SHPSAHVRALSISVLR IL G I K +N HNP+YQY N+D +D QADIEKCLT Sbjct: 1082 SHPSAHVRALSISVLRDILHTGSIRCSPKPRRLNGTHNPSYQYFNLDAVDWQADIEKCLT 1141 Query: 426 WEAHSRLSSGMHMQFLDTAAKELGCTISV 340 WEAHSRLS+G+ + FLD AAKELGCTIS+ Sbjct: 1142 WEAHSRLSNGLSINFLDIAAKELGCTISM 1170 >ref|XP_003592048.1| Protein GIGANTEA [Medicago truncatula] gi|355481096|gb|AES62299.1| Protein GIGANTEA [Medicago truncatula] Length = 1200 Score = 126 bits (317), Expect = 3e-27 Identities = 58/88 (65%), Positives = 70/88 (79%) Frame = -1 Query: 603 HPSAHVRALSISVLRAILQAGLIHSGSKQVEINSIHNPAYQYLNVDIIDCQADIEKCLTW 424 HPSAHVRALS+SVLR IL G I K + IN HNP+YQY +D++D QADIEKC+ W Sbjct: 1113 HPSAHVRALSVSVLRDILHTGSIRCSPKPLRINGSHNPSYQYFKLDVVDWQADIEKCMAW 1172 Query: 423 EAHSRLSSGMHMQFLDTAAKELGCTISV 340 EAHSR+S+G+ ++FLDTAAKELGC ISV Sbjct: 1173 EAHSRISAGLPIKFLDTAAKELGCAISV 1200