BLASTX nr result

ID: Cnidium21_contig00009986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009986
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865885.1| hypothetical protein ARALYDRAFT_495266 [Arab...   136   3e-30
ref|NP_200011.1| zinc finger CCCH domain-containing protein 63 [...   135   7e-30
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   134   2e-29
ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...   129   4e-28
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin...   129   4e-28

>ref|XP_002865885.1| hypothetical protein ARALYDRAFT_495266 [Arabidopsis lyrata subsp.
           lyrata] gi|297311720|gb|EFH42144.1| hypothetical protein
           ARALYDRAFT_495266 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  136 bits (343), Expect = 3e-30
 Identities = 56/73 (76%), Positives = 70/73 (95%)
 Frame = -1

Query: 674 LCGMHDAEAKPVLLCSCNDNTIRVYDLPSFSERGKLYSKEEVRSMQIGPAGLFFTGDGTG 495
           LCG+HDAEAKPVLLCSCNDNT+R+YDLPSF+ERGK+++K+E+R++QIGP G+FFTGDGTG
Sbjct: 365 LCGVHDAEAKPVLLCSCNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFTGDGTG 424

Query: 494 EVRVWKWLAEPTA 456
           +V+VWKW  EPTA
Sbjct: 425 QVKVWKWCTEPTA 437


>ref|NP_200011.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis
           thaliana] gi|10177733|dbj|BAB11046.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332008771|gb|AED96154.1| zinc finger CCCH
           domain-containing protein 63 [Arabidopsis thaliana]
          Length = 437

 Score =  135 bits (340), Expect = 7e-30
 Identities = 55/73 (75%), Positives = 70/73 (95%)
 Frame = -1

Query: 674 LCGMHDAEAKPVLLCSCNDNTIRVYDLPSFSERGKLYSKEEVRSMQIGPAGLFFTGDGTG 495
           LCG+HDAEAKPVLLC+CNDNT+R+YDLPSF+ERGK+++K+E+R++QIGP G+FFTGDGTG
Sbjct: 362 LCGVHDAEAKPVLLCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFTGDGTG 421

Query: 494 EVRVWKWLAEPTA 456
           +V+VWKW  EPTA
Sbjct: 422 QVKVWKWCTEPTA 434


>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223549969|gb|EEF51456.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 445

 Score =  134 bits (336), Expect = 2e-29
 Identities = 56/73 (76%), Positives = 68/73 (93%)
 Frame = -1

Query: 674 LCGMHDAEAKPVLLCSCNDNTIRVYDLPSFSERGKLYSKEEVRSMQIGPAGLFFTGDGTG 495
           LCGMHD E KPVLLCSCNDN++R+ DLPSFSERGK+++K+E+R++Q GP GLFFTGDGTG
Sbjct: 371 LCGMHDLEGKPVLLCSCNDNSVRLLDLPSFSERGKIFAKQEIRAIQTGPGGLFFTGDGTG 430

Query: 494 EVRVWKWLAEPTA 456
           +VRVWKW+AEPTA
Sbjct: 431 QVRVWKWVAEPTA 443


>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           48-like [Cucumis sativus]
          Length = 432

 Score =  129 bits (325), Expect = 4e-28
 Identities = 53/70 (75%), Positives = 64/70 (91%)
 Frame = -1

Query: 674 LCGMHDAEAKPVLLCSCNDNTIRVYDLPSFSERGKLYSKEEVRSMQIGPAGLFFTGDGTG 495
           LCGMHD + KP+LLCSCNDN++R+YDLPSFSERGK+YSKEE+RS+Q GP G+FFTGDGTG
Sbjct: 356 LCGMHDLDGKPILLCSCNDNSVRLYDLPSFSERGKIYSKEEIRSIQAGPGGIFFTGDGTG 415

Query: 494 EVRVWKWLAE 465
           +V+VW WL E
Sbjct: 416 QVKVWTWLTE 425


>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 426

 Score =  129 bits (325), Expect = 4e-28
 Identities = 53/74 (71%), Positives = 67/74 (90%)
 Frame = -1

Query: 674 LCGMHDAEAKPVLLCSCNDNTIRVYDLPSFSERGKLYSKEEVRSMQIGPAGLFFTGDGTG 495
           LCGMHD++ KP+LLC+CNDNT+ +YDLPSF+ERGK+ +K+EVR++QIGP G+FFTGDGTG
Sbjct: 351 LCGMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKQEVRAIQIGPNGIFFTGDGTG 410

Query: 494 EVRVWKWLAEPTAT 453
           EVRVW W+AE T T
Sbjct: 411 EVRVWNWIAEATTT 424


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