BLASTX nr result

ID: Cnidium21_contig00009972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009972
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521322.1| protein with unknown function [Ricinus commu...   283   3e-74
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   280   4e-73
ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   277   2e-72
gb|ABA81859.1| unknown [Solanum tuberosum]                            275   1e-71
ref|XP_004141702.1| PREDICTED: transcription initiation factor T...   266   3e-69

>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  283 bits (725), Expect = 3e-74
 Identities = 145/178 (81%), Positives = 161/178 (90%), Gaps = 1/178 (0%)
 Frame = +2

Query: 110 MADGEENLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLTDSQVYAEHAGKT 289
           MA+G+ENLPRDAKIVK+LLKSMGV+DYEPRV+HQFLELWYRYVVDVLTD+QVY+EHAGK+
Sbjct: 1   MAEGDENLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKS 60

Query: 290 AIDSDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSISGPGIALPPEEDTLIS 469
           AID DDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSI+GPG+ LPPE+DTLIS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLIS 120

Query: 470 PNYQLAIPIKQAGQAIEET-EDEEMADPNPKPTQEPKTQVPLNSSQQVSFSLGAKRPR 640
           PNYQLAIP KQ+ QA EET EDEE ADPN   +QEPKT VP  + Q+VSF L  KRP+
Sbjct: 121 PNYQLAIPKKQSVQATEETEEDEESADPN--SSQEPKTDVPQGTPQRVSFPL-TKRPK 175


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  280 bits (715), Expect = 4e-73
 Identities = 141/178 (79%), Positives = 160/178 (89%), Gaps = 1/178 (0%)
 Frame = +2

Query: 110 MADGEENLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLTDSQVYAEHAGKT 289
           MA+G+E+LPRDAKIVK+LLKSMGVDDYEPRV+HQFLELWYRYVVDVLTD+QVY+EHA K 
Sbjct: 1   MAEGDEDLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKP 60

Query: 290 AIDSDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSISGPGIALPPEEDTLIS 469
           AID DDVKLAIQSKVNFSFSQPP REVLLELARNRNKIPLPKSI+GPGI LPPE+DTLIS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLIS 120

Query: 470 PNYQLAIPIKQAGQAIEET-EDEEMADPNPKPTQEPKTQVPLNSSQQVSFSLGAKRPR 640
           PNYQLAIP K+  QA+EET EDEE ADP+   +QE +T +P ++ Q+VSF +GAKRPR
Sbjct: 121 PNYQLAIPKKRTAQAVEETEEDEEGADPS-HASQEGRTDLPQHTPQRVSFPIGAKRPR 177


>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  277 bits (709), Expect = 2e-72
 Identities = 144/178 (80%), Positives = 158/178 (88%), Gaps = 1/178 (0%)
 Frame = +2

Query: 110 MADGEENLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLTDSQVYAEHAGKT 289
           MA+GEE++PRDAKIVK+LLKSMGV+DYEPRVVHQFLELWYRYVVDVLTD+QVY+EHA KT
Sbjct: 1   MAEGEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKT 60

Query: 290 AIDSDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSISGPGIALPPEEDTLIS 469
           AID DDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSI+GPGI LPPE+DTLIS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLIS 120

Query: 470 PNYQLAIPIKQAGQAIEET-EDEEMADPNPKPTQEPKTQVPLNSSQQVSFSLGAKRPR 640
           PNYQLAIP K+  QAIEET EDEE ADPN   +QE KT  P  + Q+VSF L  KRP+
Sbjct: 121 PNYQLAIPKKRTAQAIEETEEDEESADPN--QSQEQKTDPPQLTPQRVSFPL-TKRPK 175


>gb|ABA81859.1| unknown [Solanum tuberosum]
          Length = 217

 Score =  275 bits (702), Expect = 1e-71
 Identities = 138/175 (78%), Positives = 150/175 (85%), Gaps = 5/175 (2%)
 Frame = +2

Query: 119 GEENLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLTDSQVYAEHAGKTAID 298
           GEE+LPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVL D+QVY+EHAGK +ID
Sbjct: 5   GEEDLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLMDAQVYSEHAGKASID 64

Query: 299 SDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSISGPGIALPPEEDTLISPNY 478
           SDD+KLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSI+G G+ LPPE+DTLI+PNY
Sbjct: 65  SDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGSGVPLPPEQDTLINPNY 124

Query: 479 QLAIPIKQAGQAIEETEDEEMADPNPKPTQEP-----KTQVPLNSSQQVSFSLGA 628
           QLAI  KQ  Q  E  EDEE ADPNP P++ P     KT VP  + QQVSF LGA
Sbjct: 125 QLAIAKKQTSQPEETEEDEERADPNPAPSKNPSLSHEKTDVPQGTPQQVSFPLGA 179


>ref|XP_004141702.1| PREDICTED: transcription initiation factor TFIID subunit 9-like
           [Cucumis sativus] gi|449480520|ref|XP_004155919.1|
           PREDICTED: transcription initiation factor TFIID subunit
           9-like [Cucumis sativus]
          Length = 179

 Score =  266 bits (681), Expect = 3e-69
 Identities = 137/179 (76%), Positives = 159/179 (88%), Gaps = 2/179 (1%)
 Frame = +2

Query: 110 MADGEENLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLTDSQVYAEHAGKT 289
           M++G+E LPRDAKIVKTLLKSMGV+DYEPRV+HQFLELWYRYVVDVLTD+QVY+EHAGK 
Sbjct: 1   MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 290 AIDSDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSISGPGIALPPEEDTLIS 469
           AID DDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLP+SI GPGIALPP++DTL+S
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 470 PNYQLAIPIKQAGQAIEETEDEEMADPNPKPTQEP-KTQVP-LNSSQQVSFSLGAKRPR 640
           PNYQLAIP KQA + +EETE++E  D    P+QEP  ++VP  ++SQ+VSF L AKR +
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDE-GDDTVAPSQEPSSSEVPQQHASQRVSFPL-AKRSK 177


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