BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009943
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...   446   e-123
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              445   e-122
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...   445   e-122
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin...   439   e-121
ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mi...   436   e-120

>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
            gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
            protein mis3, putative [Ricinus communis]
          Length = 377

 Score =  446 bits (1148), Expect = e-123
 Identities = 228/343 (66%), Positives = 261/343 (76%)
 Frame = +3

Query: 165  NIDRWTVQKFDPSWNEDGTSLTEDTSFSTLFPQYREKYLQEAWPIVRGALKEHGITCELN 344
            NIDRW ++KFDPSWNE G  + E +SFSTLFPQYREKYLQE WP+V+ A+KE+G+ CELN
Sbjct: 26   NIDRWKIEKFDPSWNEGG--MLEVSSFSTLFPQYREKYLQEVWPMVKSAIKEYGVACELN 83

Query: 345  LVEGSMTVKTNKRKVRDPYIIIKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGGLVR 524
            LVEGSMTV T  RK RDPYII+KARDLIKLLSRSVPAPQAIKIL+DEMQCDIIKIG LVR
Sbjct: 84   LVEGSMTVSTT-RKTRDPYIIVKARDLIKLLSRSVPAPQAIKILHDEMQCDIIKIGNLVR 142

Query: 525  NKERFVKRRQRLVGPNNSTLKALEILTGCYILVQGNTVSAMGSFKGLKQVRRIVEDCMTN 704
             KERFVKRRQ LVGPN+STLKALEILTGCYILVQGNTV+AMGSFKGLKQVR+IVEDC+ N
Sbjct: 143  KKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCIQN 202

Query: 705  KLYPVYHVKILMLKKELSENPELANENWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            KL+PVYH+KILM+KKEL ++P L NENWDRFLP                           
Sbjct: 203  KLHPVYHIKILMMKKELEKDPALQNENWDRFLPKFKKKNVKHNKVKRKEKKPYTPFPPEQ 262

Query: 885  XXSKVDIQLETGEYFLSDKKKSAKKWQEGQAKQAEKTAESKRRREEAFVPPKETATQNAS 1064
              SKVD +LE+GEYFL+++KK AKKWQE Q +QAEKTAE+KR+R+ AFVPP+E   Q+A 
Sbjct: 263  QPSKVDRELESGEYFLNNQKKQAKKWQEKQERQAEKTAENKRKRDTAFVPPEEHRDQDAG 322

Query: 1065 TSNDENNDVTAIXXXXXXXXXXXXXXXXFEKIDPETYIAAPGE 1193
             S D+NNDV AI                 E I+ E YIAA GE
Sbjct: 323  KSEDKNNDVAAIALSIKKKAKDFGKKNAVENINAEEYIAASGE 365


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  445 bits (1145), Expect = e-122
 Identities = 230/343 (67%), Positives = 257/343 (74%)
 Frame = +3

Query: 165  NIDRWTVQKFDPSWNEDGTSLTEDTSFSTLFPQYREKYLQEAWPIVRGALKEHGITCELN 344
            +ID W V KFDPSWNE G  + E +SFSTLFPQYREKYLQEAWP VRGALKE G+  ELN
Sbjct: 70   SIDHWKVDKFDPSWNEGG--MLEVSSFSTLFPQYREKYLQEAWPTVRGALKEFGVKSELN 127

Query: 345  LVEGSMTVKTNKRKVRDPYIIIKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGGLVR 524
            LVEG MTV T  RK RDPYII+KARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIG LVR
Sbjct: 128  LVEGCMTVSTT-RKTRDPYIIMKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGSLVR 186

Query: 525  NKERFVKRRQRLVGPNNSTLKALEILTGCYILVQGNTVSAMGSFKGLKQVRRIVEDCMTN 704
            NKERFVKRRQ LVGPN+STLKALEILTGCYILVQGNTV+AMGSFKGLKQVRR+VEDC+ N
Sbjct: 187  NKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQN 246

Query: 705  KLYPVYHVKILMLKKELSENPELANENWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            K++PVYH+K LM+K+EL+ +P L NENWDRFLP                           
Sbjct: 247  KMHPVYHIKTLMMKRELASDPALENENWDRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQ 306

Query: 885  XXSKVDIQLETGEYFLSDKKKSAKKWQEGQAKQAEKTAESKRRREEAFVPPKETATQNAS 1064
              SKVD+QLE+GEYFLSD+KK AKKWQ+   KQAEKTAE+KR+RE AFVPP E   Q+ S
Sbjct: 307  PPSKVDLQLESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPS 366

Query: 1065 TSNDENNDVTAIXXXXXXXXXXXXXXXXFEKIDPETYIAAPGE 1193
             S D+ NDV A+                 E ++PETYIAA GE
Sbjct: 367  KSADDKNDVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGE 409


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis vinifera]
          Length = 386

 Score =  445 bits (1145), Expect = e-122
 Identities = 230/343 (67%), Positives = 257/343 (74%)
 Frame = +3

Query: 165  NIDRWTVQKFDPSWNEDGTSLTEDTSFSTLFPQYREKYLQEAWPIVRGALKEHGITCELN 344
            +ID W V KFDPSWNE G  + E +SFSTLFPQYREKYLQEAWP VRGALKE G+  ELN
Sbjct: 32   SIDHWKVDKFDPSWNEGG--MLEVSSFSTLFPQYREKYLQEAWPTVRGALKEFGVKSELN 89

Query: 345  LVEGSMTVKTNKRKVRDPYIIIKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGGLVR 524
            LVEG MTV T  RK RDPYII+KARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIG LVR
Sbjct: 90   LVEGCMTVSTT-RKTRDPYIIMKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGSLVR 148

Query: 525  NKERFVKRRQRLVGPNNSTLKALEILTGCYILVQGNTVSAMGSFKGLKQVRRIVEDCMTN 704
            NKERFVKRRQ LVGPN+STLKALEILTGCYILVQGNTV+AMGSFKGLKQVRR+VEDC+ N
Sbjct: 149  NKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQN 208

Query: 705  KLYPVYHVKILMLKKELSENPELANENWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            K++PVYH+K LM+K+EL+ +P L NENWDRFLP                           
Sbjct: 209  KMHPVYHIKTLMMKRELASDPALENENWDRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQ 268

Query: 885  XXSKVDIQLETGEYFLSDKKKSAKKWQEGQAKQAEKTAESKRRREEAFVPPKETATQNAS 1064
              SKVD+QLE+GEYFLSD+KK AKKWQ+   KQAEKTAE+KR+RE AFVPP E   Q+ S
Sbjct: 269  PPSKVDLQLESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPS 328

Query: 1065 TSNDENNDVTAIXXXXXXXXXXXXXXXXFEKIDPETYIAAPGE 1193
             S D+ NDV A+                 E ++PETYIAA GE
Sbjct: 329  KSADDKNDVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGE 371


>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
            gi|255639399|gb|ACU19995.1| unknown [Glycine max]
          Length = 389

 Score =  439 bits (1130), Expect = e-121
 Identities = 227/345 (65%), Positives = 258/345 (74%)
 Frame = +3

Query: 165  NIDRWTVQKFDPSWNEDGTSLTEDTSFSTLFPQYREKYLQEAWPIVRGALKEHGITCELN 344
            NID W + KFDPSWN+ G  + E +SFSTLFPQYREKYLQEAWP+V+ +LKE G+ CELN
Sbjct: 39   NIDHWKIDKFDPSWNDGG--MLEVSSFSTLFPQYREKYLQEAWPMVKSSLKEFGVACELN 96

Query: 345  LVEGSMTVKTNKRKVRDPYIIIKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGGLVR 524
            LVEGSMTV T  RK RDPYIIIKARDLIKLLSRS+PAPQAIKIL+DEMQCDIIKI G+VR
Sbjct: 97   LVEGSMTVSTT-RKTRDPYIIIKARDLIKLLSRSIPAPQAIKILDDEMQCDIIKISGMVR 155

Query: 525  NKERFVKRRQRLVGPNNSTLKALEILTGCYILVQGNTVSAMGSFKGLKQVRRIVEDCMTN 704
            NKERFVKRRQ LVGPN+STLKALEILTGCYILVQGNTV+AMGSFKGLKQVRRIVE+CM N
Sbjct: 156  NKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLN 215

Query: 705  KLYPVYHVKILMLKKELSENPELANENWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            K++PVY++K+LM+KKEL ++P LA ENWDRFLP                           
Sbjct: 216  KMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQ 275

Query: 885  XXSKVDIQLETGEYFLSDKKKSAKKWQEGQAKQAEKTAESKRRREEAFVPPKETATQNAS 1064
              SK+DIQLETGEYFLS+K+KSAK WQE Q KQAEKTAE+KR+REEAF+PPKE A     
Sbjct: 276  QPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANL-VD 334

Query: 1065 TSNDENNDVTAIXXXXXXXXXXXXXXXXFEKIDPETYIAAPGEQS 1199
             S D NN+V  +                 E ID ETYI    EQ+
Sbjct: 335  KSEDANNNVADMAISLKKKTKKFGKRKSEENIDAETYIVGSSEQA 379


>ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max]
          Length = 389

 Score =  436 bits (1122), Expect = e-120
 Identities = 226/345 (65%), Positives = 259/345 (75%)
 Frame = +3

Query: 165  NIDRWTVQKFDPSWNEDGTSLTEDTSFSTLFPQYREKYLQEAWPIVRGALKEHGITCELN 344
            NID W ++KFDPSWN+ G  + E +SFSTLFPQYREKYLQEAWP+V+ ALKE G+ CELN
Sbjct: 39   NIDHWKIEKFDPSWNDGG--MLEVSSFSTLFPQYREKYLQEAWPMVKSALKEFGVACELN 96

Query: 345  LVEGSMTVKTNKRKVRDPYIIIKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGGLVR 524
            LVEGSMTV T  RK RDPYIIIKARDLIKLLSRS+PAPQAIKIL+DEMQCDIIKI G+VR
Sbjct: 97   LVEGSMTVSTT-RKTRDPYIIIKARDLIKLLSRSLPAPQAIKILDDEMQCDIIKISGMVR 155

Query: 525  NKERFVKRRQRLVGPNNSTLKALEILTGCYILVQGNTVSAMGSFKGLKQVRRIVEDCMTN 704
            NKERFVKRRQ LVGPN+STLKALEILTGCYILVQGNTV+AMGSFKGLKQVRRIVE+CM N
Sbjct: 156  NKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLN 215

Query: 705  KLYPVYHVKILMLKKELSENPELANENWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            K++PVY++K+LM+KKEL ++P LA ENWDRFLP                           
Sbjct: 216  KMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQ 275

Query: 885  XXSKVDIQLETGEYFLSDKKKSAKKWQEGQAKQAEKTAESKRRREEAFVPPKETATQNAS 1064
              SK+DIQLETGEYFLS+K+KSAK WQE Q KQAEKTAE+KR+REEAF+PPKE A     
Sbjct: 276  QPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANL-VD 334

Query: 1065 TSNDENNDVTAIXXXXXXXXXXXXXXXXFEKIDPETYIAAPGEQS 1199
             S D N++V  +                 E I+ ETYI    EQ+
Sbjct: 335  KSEDANSNVADMAMSLKKKTKKFGKRKSEENINAETYIIGSSEQA 379