BLASTX nr result

ID: Cnidium21_contig00009942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009942
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   176   2e-42
emb|CBI40396.3| unnamed protein product [Vitis vinifera]              176   2e-42
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   176   2e-42
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   173   2e-41
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   166   3e-39

>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  176 bits (446), Expect = 2e-42
 Identities = 93/189 (49%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
 Frame = +3

Query: 6    SGSWIHDRDEGEDEQVVQPXXXXXXXXXXXPHLATEKPEGISS-EKSSLRQGDSSKVPSQ 182
            SGSWIHDRDEGEDEQV+QP           P    E+PE  SS EKSSL++GDSS++P Q
Sbjct: 1801 SGSWIHDRDEGEDEQVLQPKIKRKRSIRIRPRHTVERPEEKSSNEKSSLQRGDSSQLPMQ 1860

Query: 183  MDHKYESRLKNDREQKLIVEPNXXXXXXXXXXXXXXRASHSRKISNSGKVHASQKPSRVN 362
            +DHKYE++L++D E KL  E N              R   SRKI N+ K+HAS K  ++N
Sbjct: 1861 VDHKYEAQLRSDPEAKLFGESNAFKHDQSDSSLKSRRNLPSRKIGNTSKLHASPKSGKLN 1920

Query: 363  VLSMPSEDATEHYKESWDSEATYGAGNLIGHGMSDGVQQRCKNVMNKFHRRIDKEGHQIV 542
             +S  +ED  EH +E WD +      N  G  M + +Q++CKNV++K  RRIDKEGHQIV
Sbjct: 1921 CMSARAEDVAEHSREGWDGKVM----NTGGPRMPEIMQRKCKNVISKLQRRIDKEGHQIV 1976

Query: 543  PLLTELWKK 569
            PLLT+ WK+
Sbjct: 1977 PLLTDWWKR 1985


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score =  176 bits (446), Expect = 2e-42
 Identities = 93/189 (49%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
 Frame = +3

Query: 6    SGSWIHDRDEGEDEQVVQPXXXXXXXXXXXPHLATEKPEGISS-EKSSLRQGDSSKVPSQ 182
            SGSWIHDRDEGEDEQV+QP           P    E+PE  SS EKSSL++GDSS++P Q
Sbjct: 1551 SGSWIHDRDEGEDEQVLQPKIKRKRSIRIRPRHTVERPEEKSSNEKSSLQRGDSSQLPMQ 1610

Query: 183  MDHKYESRLKNDREQKLIVEPNXXXXXXXXXXXXXXRASHSRKISNSGKVHASQKPSRVN 362
            +DHKYE++L++D E KL  E N              R   SRKI N+ K+HAS K  ++N
Sbjct: 1611 VDHKYEAQLRSDPEAKLFGESNAFKHDQSDSSLKSRRNLPSRKIGNTSKLHASPKSGKLN 1670

Query: 363  VLSMPSEDATEHYKESWDSEATYGAGNLIGHGMSDGVQQRCKNVMNKFHRRIDKEGHQIV 542
             +S  +ED  EH +E WD +      N  G  M + +Q++CKNV++K  RRIDKEGHQIV
Sbjct: 1671 CMSARAEDVAEHSREGWDGKVM----NTGGPRMPEIMQRKCKNVISKLQRRIDKEGHQIV 1726

Query: 543  PLLTELWKK 569
            PLLT+ WK+
Sbjct: 1727 PLLTDWWKR 1735


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  176 bits (446), Expect = 2e-42
 Identities = 93/189 (49%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
 Frame = +3

Query: 6    SGSWIHDRDEGEDEQVVQPXXXXXXXXXXXPHLATEKPEGISS-EKSSLRQGDSSKVPSQ 182
            SGSWIHDRDEGEDEQV+QP           P    E+PE  SS EKSSL++GDSS++P Q
Sbjct: 1776 SGSWIHDRDEGEDEQVLQPKIKRKRSIRIRPRHTVERPEEKSSNEKSSLQRGDSSQLPMQ 1835

Query: 183  MDHKYESRLKNDREQKLIVEPNXXXXXXXXXXXXXXRASHSRKISNSGKVHASQKPSRVN 362
            +DHKYE++L++D E KL  E N              R   SRKI N+ K+HAS K  ++N
Sbjct: 1836 VDHKYEAQLRSDPEAKLFGESNAFKHDQSDSSLKSRRNLPSRKIGNTSKLHASPKSGKLN 1895

Query: 363  VLSMPSEDATEHYKESWDSEATYGAGNLIGHGMSDGVQQRCKNVMNKFHRRIDKEGHQIV 542
             +S  +ED  EH +E WD +      N  G  M + +Q++CKNV++K  RRIDKEGHQIV
Sbjct: 1896 CMSARAEDVAEHSREGWDGKVM----NTGGPRMPEIMQRKCKNVISKLQRRIDKEGHQIV 1951

Query: 543  PLLTELWKK 569
            PLLT+ WK+
Sbjct: 1952 PLLTDWWKR 1960


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  173 bits (438), Expect = 2e-41
 Identities = 92/188 (48%), Positives = 122/188 (64%)
 Frame = +3

Query: 6    SGSWIHDRDEGEDEQVVQPXXXXXXXXXXXPHLATEKPEGISSEKSSLRQGDSSKVPSQM 185
            SGSWIHDRDEGEDEQV+QP           P L  EKPE  SS  + +++GDS  +P Q+
Sbjct: 1769 SGSWIHDRDEGEDEQVLQPKIKRKRSIRLRPRLTVEKPEEKSS--NDVQRGDSFLLPFQV 1826

Query: 186  DHKYESRLKNDREQKLIVEPNXXXXXXXXXXXXXXRASHSRKISNSGKVHASQKPSRVNV 365
            D+KY+++LK+D E K +VEP+              R   SR+I+ + K+ AS K SR+N+
Sbjct: 1827 DNKYQAQLKSDTEMKALVEPSGFKHDQSDSSRSR-RNLPSRRIAKTSKLRASPKSSRLNL 1885

Query: 366  LSMPSEDATEHYKESWDSEATYGAGNLIGHGMSDGVQQRCKNVMNKFHRRIDKEGHQIVP 545
             S P+EDA EH +ESWD +    +G      MSD +Q+RCKNV++KF RRIDKEG QIVP
Sbjct: 1886 QSAPAEDAAEHSRESWDGKVPSTSGASTLGKMSDVIQRRCKNVISKFQRRIDKEGQQIVP 1945

Query: 546  LLTELWKK 569
            LL +LWK+
Sbjct: 1946 LLADLWKR 1953


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  166 bits (419), Expect = 3e-39
 Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 3/191 (1%)
 Frame = +3

Query: 6    SGSWIHDRDEGEDEQVVQPXXXXXXXXXXXPHLATEKPEGISSEKSSL--RQGDSSKVPS 179
            SGSWIHDR+EGEDEQV+QP           P    E+P+    EKS +  ++GD+  +P 
Sbjct: 1790 SGSWIHDREEGEDEQVLQPKIKRKRSIRLRPRHTMERPD----EKSGIEVQRGDACLLPF 1845

Query: 180  QMDHKYESRLKNDREQKLIVEPNXXXXXXXXXXXXXXRASHSRKISNSGKVHASQKPSRV 359
            Q DHKY+++L+ D E K   EPN              R   SR+I+N+ K+HAS K SR+
Sbjct: 1846 QGDHKYQAQLRTDAEMKGFGEPNPSRHDQSDSSKNR-RTIPSRRIANTSKLHASPKSSRL 1904

Query: 360  NVLSMPSEDATEHYKESWDSEATYGAGN-LIGHGMSDGVQQRCKNVMNKFHRRIDKEGHQ 536
            ++ + P EDA EH +ESWD + T  +G+ ++G  MSD +Q+RCKNV++K  RRIDKEG  
Sbjct: 1905 HMQAAPPEDAAEHSRESWDGKVTNASGSSVLGSKMSDVIQRRCKNVISKLQRRIDKEGQH 1964

Query: 537  IVPLLTELWKK 569
            IVP+LT+LWK+
Sbjct: 1965 IVPVLTDLWKR 1975


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