BLASTX nr result

ID: Cnidium21_contig00009926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009926
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894132.1| delta-adaptin [Arabidopsis lyrata subsp. lyr...   184   8e-45
ref|NP_175308.1| AP-3 complex subunit delta [Arabidopsis thalian...   182   3e-44
ref|XP_003524366.1| PREDICTED: AP-3 complex subunit delta-like [...   178   5e-43
ref|XP_004137481.1| PREDICTED: AP-3 complex subunit delta-like [...   176   2e-42
ref|XP_003532516.1| PREDICTED: AP-3 complex subunit delta-like [...   175   3e-42

>ref|XP_002894132.1| delta-adaptin [Arabidopsis lyrata subsp. lyrata]
           gi|297339974|gb|EFH70391.1| delta-adaptin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 863

 Score =  184 bits (466), Expect = 8e-45
 Identities = 87/118 (73%), Positives = 102/118 (86%)
 Frame = -3

Query: 354 VSGFFCELAMRDGRLCLPLAPEFYKILVECRNNWVLIKVLKVFGKLAELEPRLGKKLVEP 175
           V G FCELA +D + CLPLAPEFYK+LV+ RNNWVLIKVLK+F KLA +EPRLGKK+ EP
Sbjct: 203 VVGVFCELATKDPQSCLPLAPEFYKVLVDSRNNWVLIKVLKIFAKLASIEPRLGKKVAEP 262

Query: 174 VCEHLRRTGAKSVVFECVRTIVSCLSEFEYALRLAVEKIREFLVDDDPNLKYLGLQGL 1
           +CEH+RRT AKS+VFECVRT+VS LS+ E A++LAV KIREFLV+DDPNLKYLGL  L
Sbjct: 263 ICEHMRRTVAKSLVFECVRTVVSSLSDHEAAVKLAVAKIREFLVEDDPNLKYLGLNAL 320


>ref|NP_175308.1| AP-3 complex subunit delta [Arabidopsis thaliana]
           gi|30694404|ref|NP_849785.1| AP-3 complex subunit delta
           [Arabidopsis thaliana] gi|79319515|ref|NP_001031156.1|
           AP-3 complex subunit delta [Arabidopsis thaliana]
           gi|75169245|sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3
           complex subunit delta; AltName: Full=Adapter-related
           protein complex 3 subunit delta; AltName:
           Full=Delta-adaptin; Short=At-d-Ad; Short=At-delta-Ad
           gi|12597810|gb|AAG60121.1|AC073555_5 delta-adaptin,
           putative [Arabidopsis thaliana]
           gi|15810217|gb|AAL07009.1| At1g48760/F11I4_7
           [Arabidopsis thaliana] gi|332194224|gb|AEE32345.1| AP-3
           complex subunit delta [Arabidopsis thaliana]
           gi|332194225|gb|AEE32346.1| AP-3 complex subunit delta
           [Arabidopsis thaliana] gi|332194226|gb|AEE32347.1| AP-3
           complex subunit delta [Arabidopsis thaliana]
          Length = 869

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/118 (73%), Positives = 102/118 (86%)
 Frame = -3

Query: 354 VSGFFCELAMRDGRLCLPLAPEFYKILVECRNNWVLIKVLKVFGKLAELEPRLGKKLVEP 175
           V G FCELA +D + CLPLAPEFYK+LV+ RNNWVLIKVLK+F KLA +EPRLGKK+ EP
Sbjct: 203 VVGVFCELATKDPQSCLPLAPEFYKVLVDSRNNWVLIKVLKIFAKLALIEPRLGKKVAEP 262

Query: 174 VCEHLRRTGAKSVVFECVRTIVSCLSEFEYALRLAVEKIREFLVDDDPNLKYLGLQGL 1
           +CEH+RRT AKS+VFECVRT+VS LS+ E A++LAV KIREFLV+DDPNLKYLGL  L
Sbjct: 263 ICEHMRRTVAKSLVFECVRTVVSSLSDNEAAVKLAVAKIREFLVEDDPNLKYLGLNAL 320


>ref|XP_003524366.1| PREDICTED: AP-3 complex subunit delta-like [Glycine max]
          Length = 916

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/118 (71%), Positives = 103/118 (87%)
 Frame = -3

Query: 354 VSGFFCELAMRDGRLCLPLAPEFYKILVECRNNWVLIKVLKVFGKLAELEPRLGKKLVEP 175
           V G FCELA +D +  LPLAPEFY+ILV+ +NNWVLIKVLKVF KLA LEPRLGK++VEP
Sbjct: 200 VVGVFCELAAKDPKSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEPRLGKRIVEP 259

Query: 174 VCEHLRRTGAKSVVFECVRTIVSCLSEFEYALRLAVEKIREFLVDDDPNLKYLGLQGL 1
           VC+H+RR+GAKS+VFECVRT+++ LS +E A++LAVEK+RE LVD DPNL+YLGLQ L
Sbjct: 260 VCDHMRRSGAKSLVFECVRTVLTSLSGYESAVKLAVEKVRELLVDQDPNLRYLGLQAL 317


>ref|XP_004137481.1| PREDICTED: AP-3 complex subunit delta-like [Cucumis sativus]
           gi|449503121|ref|XP_004161844.1| PREDICTED: AP-3 complex
           subunit delta-like [Cucumis sativus]
          Length = 977

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/118 (71%), Positives = 100/118 (84%)
 Frame = -3

Query: 354 VSGFFCELAMRDGRLCLPLAPEFYKILVECRNNWVLIKVLKVFGKLAELEPRLGKKLVEP 175
           V G FCELA +D R  LPLAPEFY+IL + +NNWVLIKVLK+F  LA LEPRL +K+VEP
Sbjct: 201 VVGVFCELASQDPRSYLPLAPEFYRILADSKNNWVLIKVLKIFKNLAPLEPRLARKIVEP 260

Query: 174 VCEHLRRTGAKSVVFECVRTIVSCLSEFEYALRLAVEKIREFLVDDDPNLKYLGLQGL 1
           + EH+RRTGAKS++FEC+RT+V+ LS+FE A+RLAVEK REFLVDDDPNLKYLGL  L
Sbjct: 261 ITEHMRRTGAKSLLFECIRTVVTSLSDFETAVRLAVEKTREFLVDDDPNLKYLGLHAL 318


>ref|XP_003532516.1| PREDICTED: AP-3 complex subunit delta-like [Glycine max]
          Length = 862

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/118 (70%), Positives = 102/118 (86%)
 Frame = -3

Query: 354 VSGFFCELAMRDGRLCLPLAPEFYKILVECRNNWVLIKVLKVFGKLAELEPRLGKKLVEP 175
           V G FCELA +D    LPLAPEFY+ILV+ +NNWVLIKVLKVF KLA LEPRLGK++VEP
Sbjct: 201 VIGVFCELAAKDPGSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEPRLGKRIVEP 260

Query: 174 VCEHLRRTGAKSVVFECVRTIVSCLSEFEYALRLAVEKIREFLVDDDPNLKYLGLQGL 1
           VC+H+ R+GAKS+VFECVRT+++ LS++E A++LAVEK+RE LVD DPNL+YLGLQ L
Sbjct: 261 VCDHMGRSGAKSLVFECVRTVLTSLSDYESAVKLAVEKVRELLVDQDPNLRYLGLQAL 318


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