BLASTX nr result

ID: Cnidium21_contig00009899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009899
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26282.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257...    87   1e-15
emb|CBI28717.3| unnamed protein product [Vitis vinifera]               82   4e-14
ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852...    82   4e-14
ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>emb|CBI26282.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
 Frame = -1

Query: 520 PFSLPINQTLAITLPRACNSASVPIQCKASGVPLXXXXXXXXXXXXXXXXXXXXXXXXXS 341
           PF +PIN+TLAI+LPRACN+ASVP+QCKA+G P+                          
Sbjct: 64  PFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSPQATPSPTGPSPK 123

Query: 340 KALSPAKTT------SEMEPTSSPAETTSENITPTATPGSRPVLNPTSASNRQSSYVLSQ 179
            +  P  T+      S+  P+ +P   T ++  PT T GSRPVL P SA NR  S  LS 
Sbjct: 124 ASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTP-SAGNRPQS--LSP 180

Query: 178 SPLLAFLGIMFL 143
           S +L  LGI+F+
Sbjct: 181 SLVLFVLGIIFI 192


>ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257872 [Vitis vinifera]
          Length = 217

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
 Frame = -1

Query: 520 PFSLPINQTLAITLPRACNSASVPIQCKASGVPLXXXXXXXXXXXXXXXXXXXXXXXXXS 341
           PF +PIN+TLAI+LPRACN+ASVP+QCKA+G P+                          
Sbjct: 86  PFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSPQATPSPTGPSPK 145

Query: 340 KALSPAKTT------SEMEPTSSPAETTSENITPTATPGSRPVLNPTSASNRQSSYVLSQ 179
            +  P  T+      S+  P+ +P   T ++  PT T GSRPVL P SA NR  S  LS 
Sbjct: 146 ASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTP-SAGNRPQS--LSP 202

Query: 178 SPLLAFLGIMFL 143
           S +L  LGI+F+
Sbjct: 203 SLVLFVLGIIFI 214


>emb|CBI28717.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 60/132 (45%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
 Frame = -1

Query: 520 PFSLPINQTLAITLPRACNSASVPIQCKASGVPLXXXXXXXXXXXXXXXXXXXXXXXXXS 341
           P  LPIN+TLAI+LPRACN  SVPIQCKASG PL                          
Sbjct: 51  PLQLPINRTLAISLPRACNMGSVPIQCKASGTPLPAPGPVLLGPTLPPPAAAPLSPRASK 110

Query: 340 KA---LSPA---KTTSEMEPTSSPAETTSENITPTATPGSRPVLNPTSASNRQSSYVLSQ 179
            A   L+PA   +T  E+ P S P ++ +     T TPG RPVL P SASN   SY+ S 
Sbjct: 111 AAAATLAPAPEPETAIELSPASPPVDSETPT---TTTPGIRPVLTP-SASN--PSYI-SS 163

Query: 178 SPLLAFLGIMFL 143
             LL  LGIMFL
Sbjct: 164 PLLLIVLGIMFL 175


>ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852532 [Vitis vinifera]
          Length = 214

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 60/132 (45%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
 Frame = -1

Query: 520 PFSLPINQTLAITLPRACNSASVPIQCKASGVPLXXXXXXXXXXXXXXXXXXXXXXXXXS 341
           P  LPIN+TLAI+LPRACN  SVPIQCKASG PL                          
Sbjct: 87  PLQLPINRTLAISLPRACNMGSVPIQCKASGTPLPAPGPVLLGPTLPPPAAAPLSPRASK 146

Query: 340 KA---LSPA---KTTSEMEPTSSPAETTSENITPTATPGSRPVLNPTSASNRQSSYVLSQ 179
            A   L+PA   +T  E+ P S P ++ +     T TPG RPVL P SASN   SY+ S 
Sbjct: 147 AAAATLAPAPEPETAIELSPASPPVDSETPT---TTTPGIRPVLTP-SASN--PSYI-SS 199

Query: 178 SPLLAFLGIMFL 143
             LL  LGIMFL
Sbjct: 200 PLLLIVLGIMFL 211


>ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|222864801|gb|EEF01932.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/124 (39%), Positives = 63/124 (50%)
 Frame = -1

Query: 520 PFSLPINQTLAITLPRACNSASVPIQCKASGVPLXXXXXXXXXXXXXXXXXXXXXXXXXS 341
           PFS+PIN+TLAI+LPRACN   VP+QCKA+G P+                          
Sbjct: 78  PFSIPINRTLAISLPRACNMPGVPVQCKATGSPIPAPAPVVPEPTP-------------- 123

Query: 340 KALSPAKTTSEMEPTSSPAETTSENITPTATPGSRPVLNPTSASNRQSSYVLSQSPLLAF 161
              S     S+  P  +P  +T +   PT+T GSRPVL P SAS    S+ LS S LL  
Sbjct: 124 ---STLPPVSDTTPLLTPPSSTGDTGAPTSTTGSRPVLTPPSAS--APSHSLSPSLLLFA 178

Query: 160 LGIM 149
           +G +
Sbjct: 179 VGFV 182


Top