BLASTX nr result

ID: Cnidium21_contig00009885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009885
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282509.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    82   5e-14
emb|CAN74840.1| hypothetical protein VITISV_035527 [Vitis vinifera]    80   2e-13
gb|ACC95129.1| COL1 [Beta vulgaris subsp. vulgaris]                    75   7e-12
ref|NP_001233839.1| CONSTANS 1 [Solanum lycopersicum] gi|4554488...    74   2e-11
gb|ACB36911.2| CONSTANS-like protein 1 [Chenopodium rubrum]            73   3e-11

>ref|XP_002282509.1| PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Vitis
           vinifera]
          Length = 391

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   NPLASRHHRVPVAPIPACVYGPQTAK--GSILGLGTQLDNGFLTPETDEVAXXXXXXXXX 176
           NPLA RHHRVPV PI  C+YGP      G+++    + DNGFL  E +E           
Sbjct: 97  NPLARRHHRVPVLPIAGCLYGPPATDPGGTVVRSAAEADNGFLGQEAEET---------- 146

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXESEAASWLLIHPAKDN---TNQITNGLLFGGEAVDE 347
                                   E EAASWLL++P K+N   +N   NGLLFGGE VDE
Sbjct: 147 -------------------IDEEDEDEAASWLLLNPVKNNNGSSNNQNNGLLFGGE-VDE 186

Query: 348 YLD 356
           YLD
Sbjct: 187 YLD 189


>emb|CAN74840.1| hypothetical protein VITISV_035527 [Vitis vinifera]
          Length = 449

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/123 (40%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   NPLASRHHRVPVAPIPACVYGPQTAK--GSILGLGTQLDNGFLTPETDEVAXXXXXXXXX 176
           NPLA RHHRVP  PI  C+YGP      G+++    + DNGFL  E +E           
Sbjct: 97  NPLARRHHRVPXLPIAGCLYGPPATDPGGTVVRSAAEADNGFLGQEAEET---------- 146

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXESEAASWLLIHPAKDN---TNQITNGLLFGGEAVDE 347
                                   E EAASWLL++P K+N   +N   NGLLFGGE VDE
Sbjct: 147 -------------------IDEEDEDEAASWLLLNPVKNNNGSSNNQNNGLLFGGE-VDE 186

Query: 348 YLD 356
           YLD
Sbjct: 187 YLD 189


>gb|ACC95129.1| COL1 [Beta vulgaris subsp. vulgaris]
          Length = 367

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/119 (39%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   NPLASRHHRVPVAPIPACVYGPQTAKGSILGLGTQLDNGFLT-PETDEVAXXXXXXXXXX 179
           NPLA RH RVP+ P+  CVYGPQ  + S        ++ FLT PE D+            
Sbjct: 92  NPLARRHQRVPIMPVAGCVYGPQGGRMS--------EDRFLTLPEGDD------------ 131

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXESEAASWLLIHPAKDNTNQITNGLLFGGEAVDEYLD 356
                                  E EAASWLL++P K++ NQ TNG L GG  VDEYLD
Sbjct: 132 ---------------HTTDHEGDEDEAASWLLLNPVKNSNNQNTNGFLTGGGEVDEYLD 175


>ref|NP_001233839.1| CONSTANS 1 [Solanum lycopersicum] gi|45544881|gb|AAS67376.1|
           CONSTANS 1 [Solanum lycopersicum]
           gi|45544883|gb|AAS67377.1| CONSTANS 1 [Solanum
           lycopersicum]
          Length = 391

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 48/128 (37%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
 Frame = +3

Query: 3   NPLASRHHRVPVAPIPACVYGPQTAK---------GSILGLGTQLDNGFLTPETDEVAXX 155
           NPLA RHHRVP+ PIP  +YGP             G   G GT+ D+GFL+   D     
Sbjct: 88  NPLARRHHRVPIMPIPGTIYGPPAVHTITGGSMMIGGTTGEGTE-DDGFLSLNQDA---- 142

Query: 156 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESEAASWLLIHPAKDNTNQITN-GLLFGG 332
                                          E EAASWLL++P   N N+  N G+LFGG
Sbjct: 143 ----------------------DDTTIDEEDEDEAASWLLLNPPVKNNNKNNNYGMLFGG 180

Query: 333 EAVDEYLD 356
           E VD+YLD
Sbjct: 181 EVVDDYLD 188


>gb|ACB36911.2| CONSTANS-like protein 1 [Chenopodium rubrum]
          Length = 365

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   NPLASRHHRVPVAPIPACVYGPQTAKGSILGLGTQLDNGFLT-PETDEVAXXXXXXXXXX 179
           NPLA RHHRVP+ P+  CVYGP   + S        ++GFL  P+ D+            
Sbjct: 91  NPLARRHHRVPIMPV-GCVYGPSDGRMS--------EDGFLDLPDRDDQTTDHEGD---- 137

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXESEAASWLLIHPAKDNTNQITNGLLFGGEAVDEYLD 356
                                  E EAASWLL++P K++ NQ TNG L GG  VDEYLD
Sbjct: 138 -----------------------EDEAASWLLLNPGKNSNNQTTNGFLTGGGEVDEYLD 173


Top