BLASTX nr result

ID: Cnidium21_contig00009862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009862
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512065.1| SP1L, putative [Ricinus communis] gi|2235492...   102   1e-19
ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|1...   102   1e-19
ref|XP_002316083.1| predicted protein [Populus trichocarpa] gi|1...   100   7e-19
gb|AAU05601.1| hypothetical protein [Fragaria x ananassa]              97   5e-18
ref|XP_003614140.1| hypothetical protein MTR_5g045310 [Medicago ...    92   1e-16

>ref|XP_002512065.1| SP1L, putative [Ricinus communis] gi|223549245|gb|EEF50734.1| SP1L,
           putative [Ricinus communis]
          Length = 113

 Score =  102 bits (253), Expect = 1e-19
 Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 8/84 (9%)
 Frame = +1

Query: 268 LNYLFGSGEAPKPSTKDAEASLSDVQAVNHSP--KPSAAPKSVDVSKQIPAGINSTATS- 438
           L YLFG GEAPKP+ K+A+ + +D Q VN  P  KP+ A + VD+SKQ+PAGINST+T+ 
Sbjct: 14  LGYLFGDGEAPKPTRKNAQPAPNDAQVVNDLPPSKPAVASQPVDISKQVPAGINSTSTNN 73

Query: 439 -----GQNTGNFLTDRPSTKVHSA 495
                GQNTGNFLTDRPSTKVH+A
Sbjct: 74  YMRADGQNTGNFLTDRPSTKVHAA 97


>ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|118484460|gb|ABK94106.1|
           unknown [Populus trichocarpa]
           gi|118485184|gb|ABK94453.1| unknown [Populus
           trichocarpa] gi|222851167|gb|EEE88714.1| predicted
           protein [Populus trichocarpa]
          Length = 113

 Score =  102 bits (253), Expect = 1e-19
 Identities = 51/84 (60%), Positives = 65/84 (77%), Gaps = 8/84 (9%)
 Frame = +1

Query: 268 LNYLFGSGEAPKPSTKDAEASLSDVQAVNHSP--KPSAAPKSVDVSKQIPAGINSTATS- 438
           L YLFGSGEAPKP T +A+A+ S+    N+ P  KP+AAP+  D++KQ+PAGINST+T+ 
Sbjct: 14  LGYLFGSGEAPKPGTNNAQAAPSESLPANNPPPSKPAAAPQPADINKQVPAGINSTSTNN 73

Query: 439 -----GQNTGNFLTDRPSTKVHSA 495
                GQNTGNF+TDRPSTKVH+A
Sbjct: 74  YLRADGQNTGNFITDRPSTKVHAA 97


>ref|XP_002316083.1| predicted protein [Populus trichocarpa] gi|118483990|gb|ABK93882.1|
           unknown [Populus trichocarpa]
           gi|222865123|gb|EEF02254.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 49/84 (58%), Positives = 66/84 (78%), Gaps = 8/84 (9%)
 Frame = +1

Query: 268 LNYLFGSGEAPKPSTKDAEASLSDVQAVNH--SPKPSAAPKSVDVSKQIPAGINSTATS- 438
           L YLFGSGEAPKPST +A+A+ S+VQ  ++   PKP+AAP+  +++++ PAGINST+T+ 
Sbjct: 14  LGYLFGSGEAPKPSTNNAQAAPSEVQPASNPPPPKPAAAPQPAEINREFPAGINSTSTNN 73

Query: 439 -----GQNTGNFLTDRPSTKVHSA 495
                GQN GNF+TDRPSTKVH+A
Sbjct: 74  YLRADGQNAGNFITDRPSTKVHAA 97


>gb|AAU05601.1| hypothetical protein [Fragaria x ananassa]
          Length = 140

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 12/88 (13%)
 Frame = +1

Query: 268 LNYLFGSGEAPKPSTKDAEASLSDVQAVNH-SPKPSAAP-----KSVDVSKQIPAGINST 429
           L+YLFGSG  PKP T + +A+  +VQAVN  +PKP+A+P     + VD++KQIPAGI+ST
Sbjct: 36  LDYLFGSGGDPKPRTNNVQAAPKEVQAVNEPTPKPTASPPPPKPEPVDITKQIPAGIHST 95

Query: 430 ATS------GQNTGNFLTDRPSTKVHSA 495
           +T+      GQNTGNF+TDRPSTKVHSA
Sbjct: 96  STNNYMRADGQNTGNFITDRPSTKVHSA 123


>ref|XP_003614140.1| hypothetical protein MTR_5g045310 [Medicago truncatula]
           gi|355515475|gb|AES97098.1| hypothetical protein
           MTR_5g045310 [Medicago truncatula]
           gi|388503332|gb|AFK39732.1| unknown [Medicago
           truncatula]
          Length = 104

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = +1

Query: 268 LNYLFGSGEAPKPSTKDAEASLSDVQAVNHSP--KPSAAPKSVDVSKQIPAGINSTATSG 441
           L YLFGSGEAPKP+   A+    +VQ VN++P  KP+AAPK++D SK  PAGINS +  G
Sbjct: 14  LGYLFGSGEAPKPAATTAQP---EVQPVNNAPPSKPAAAPKAIDPSK--PAGINSNSIDG 68

Query: 442 QNTGNFLTDRPSTKVHSA 495
            NTGNF+TDRPSTKVH+A
Sbjct: 69  LNTGNFITDRPSTKVHAA 86


Top