BLASTX nr result
ID: Cnidium21_contig00009841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009841
(954 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33743.3| unnamed protein product [Vitis vinifera] 180 1e-95
ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing p... 180 1e-95
ref|XP_003539325.1| PREDICTED: F-box-like/WD repeat-containing p... 176 5e-95
ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing p... 178 1e-94
ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ri... 177 4e-94
>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
Length = 725
Score = 180 bits (457), Expect(3) = 1e-95
Identities = 81/106 (76%), Positives = 92/106 (86%)
Frame = -2
Query: 638 QWDPTGSLLASSSDDTTVKIWSLKQDNYIHDFREHRKEVLISRWSPTGQGTSNPNKQLVL 459
+WDPTG LLAS SDD T KIWS+KQ+ Y+HD REH KE+ RWSPTGQGT+NPN+ LVL
Sbjct: 567 KWDPTGQLLASCSDDITAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNPNQPLVL 626
Query: 458 ASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYLASGS 321
ASASFDSTVK WDVEQGKL+C+ NGHRD VYS+AFSP+GEYLASGS
Sbjct: 627 ASASFDSTVKLWDVEQGKLLCSLNGHRDPVYSVAFSPNGEYLASGS 672
Score = 140 bits (352), Expect(3) = 1e-95
Identities = 65/105 (61%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = -3
Query: 949 IWTSDGELKGTLRKHKEAIVSIKWNRKGDYVLTGSLDTTAIVWDVKTNDLIQHFELHSGQ 770
IW+++GEL+ TL KHK I S+KWNRKGDY+LTGS D TAIVWDVKT + Q FE H+G
Sbjct: 462 IWSTNGELRSTLSKHKGPIFSLKWNRKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGP 521
Query: 769 VLDIDWCDDASFA-ASTEKLIHVCKIGTNCPVKTFPGHLDEVNSV 638
LD+DW ++ SFA +ST+ +I+VCKIG N P+KTF GH EVN V
Sbjct: 522 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFSGHQGEVNCV 566
Score = 78.6 bits (192), Expect(3) = 1e-95
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -3
Query: 316 DNSLNIWSVKTGKIVKSYAGKGIIFEVCWNKEGDKVAACNNRNHVFVLDFRM 161
D S++IWS+K KIVK+Y G G IFEVCWNKEGDK+AAC N V VLDFRM
Sbjct: 674 DRSMHIWSLKERKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 725
>ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1X-like
isoform 1 [Vitis vinifera]
Length = 590
Score = 180 bits (457), Expect(3) = 1e-95
Identities = 81/106 (76%), Positives = 92/106 (86%)
Frame = -2
Query: 638 QWDPTGSLLASSSDDTTVKIWSLKQDNYIHDFREHRKEVLISRWSPTGQGTSNPNKQLVL 459
+WDPTG LLAS SDD T KIWS+KQ+ Y+HD REH KE+ RWSPTGQGT+NPN+ LVL
Sbjct: 432 KWDPTGQLLASCSDDITAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNPNQPLVL 491
Query: 458 ASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYLASGS 321
ASASFDSTVK WDVEQGKL+C+ NGHRD VYS+AFSP+GEYLASGS
Sbjct: 492 ASASFDSTVKLWDVEQGKLLCSLNGHRDPVYSVAFSPNGEYLASGS 537
Score = 140 bits (352), Expect(3) = 1e-95
Identities = 65/105 (61%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = -3
Query: 949 IWTSDGELKGTLRKHKEAIVSIKWNRKGDYVLTGSLDTTAIVWDVKTNDLIQHFELHSGQ 770
IW+++GEL+ TL KHK I S+KWNRKGDY+LTGS D TAIVWDVKT + Q FE H+G
Sbjct: 327 IWSTNGELRSTLSKHKGPIFSLKWNRKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGP 386
Query: 769 VLDIDWCDDASFA-ASTEKLIHVCKIGTNCPVKTFPGHLDEVNSV 638
LD+DW ++ SFA +ST+ +I+VCKIG N P+KTF GH EVN V
Sbjct: 387 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFSGHQGEVNCV 431
Score = 78.6 bits (192), Expect(3) = 1e-95
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -3
Query: 316 DNSLNIWSVKTGKIVKSYAGKGIIFEVCWNKEGDKVAACNNRNHVFVLDFRM 161
D S++IWS+K KIVK+Y G G IFEVCWNKEGDK+AAC N V VLDFRM
Sbjct: 539 DRSMHIWSLKERKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 590
>ref|XP_003539325.1| PREDICTED: F-box-like/WD repeat-containing protein ebi-like
[Glycine max]
Length = 558
Score = 176 bits (446), Expect(3) = 5e-95
Identities = 80/106 (75%), Positives = 91/106 (85%)
Frame = -2
Query: 638 QWDPTGSLLASSSDDTTVKIWSLKQDNYIHDFREHRKEVLISRWSPTGQGTSNPNKQLVL 459
+WDPTGSLLAS SDD T KIWS+KQD Y+H+FREH KE+ RWSPTG GT+NPNK LVL
Sbjct: 400 KWDPTGSLLASCSDDMTAKIWSMKQDKYLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVL 459
Query: 458 ASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYLASGS 321
ASASFDSTVK WDVE GKL+ + NGHRD VYS+AFSP+GEY+ASGS
Sbjct: 460 ASASFDSTVKLWDVELGKLLYSLNGHRDRVYSVAFSPNGEYIASGS 505
Score = 140 bits (354), Expect(3) = 5e-95
Identities = 65/105 (61%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = -3
Query: 949 IWTSDGELKGTLRKHKEAIVSIKWNRKGDYVLTGSLDTTAIVWDVKTNDLIQHFELHSGQ 770
IWT++GELK TL KHK I S+KWN+KGDY+LTGS D TAIVWDVK + Q FE HSG
Sbjct: 295 IWTTNGELKSTLSKHKGPIFSLKWNKKGDYILTGSCDQTAIVWDVKAEEWKQQFEFHSGW 354
Query: 769 VLDIDWCDDASFA-ASTEKLIHVCKIGTNCPVKTFPGHLDEVNSV 638
LD+DW ++ SFA +ST+ IHVCKIG N P++TF GH EVN +
Sbjct: 355 TLDVDWRNNVSFATSSTDTKIHVCKIGENLPIRTFVGHQSEVNCI 399
Score = 79.7 bits (195), Expect(3) = 5e-95
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = -3
Query: 316 DNSLNIWSVKTGKIVKSYAGKGIIFEVCWNKEGDKVAACNNRNHVFVLDFRM 161
D S+ IWS+K GKIVK+Y G G IFEVCWNKEGDK+AAC N V VLDFRM
Sbjct: 507 DRSMLIWSLKEGKIVKTYTGDGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 558
>ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
[Cucumis sativus] gi|449513123|ref|XP_004164237.1|
PREDICTED: F-box-like/WD repeat-containing protein
TBL1XR1-like [Cucumis sativus]
Length = 594
Score = 178 bits (451), Expect(3) = 1e-94
Identities = 81/106 (76%), Positives = 92/106 (86%)
Frame = -2
Query: 638 QWDPTGSLLASSSDDTTVKIWSLKQDNYIHDFREHRKEVLISRWSPTGQGTSNPNKQLVL 459
+WDPTGSLLAS SDD T KIWS+KQD Y++D REH KE+ RWSPTG GT+NPN+QLVL
Sbjct: 436 KWDPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVL 495
Query: 458 ASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYLASGS 321
ASASFDSTVK WDVE GKLIC+ NGHR+ VYS+AFSP+GEYLASGS
Sbjct: 496 ASASFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGS 541
Score = 135 bits (341), Expect(3) = 1e-94
Identities = 63/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = -3
Query: 949 IWTSDGELKGTLRKHKEAIVSIKWNRKGDYVLTGSLDTTAIVWDVKTNDLIQHFELHSGQ 770
IW+++GEL+ TL KHK I S+KWN+KGDY+LTGS D TAIVWDVK + Q FE HSG
Sbjct: 331 IWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGP 390
Query: 769 VLDIDWCDDASFA-ASTEKLIHVCKIGTNCPVKTFPGHLDEVNSV 638
LD+DW ++ SFA +ST+ +I+VCKIG P+KTF GH EVN V
Sbjct: 391 TLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCV 435
Score = 81.6 bits (200), Expect(3) = 1e-94
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -3
Query: 316 DNSLNIWSVKTGKIVKSYAGKGIIFEVCWNKEGDKVAACNNRNHVFVLDFRM 161
D S++IWS+K GKIVK+Y G G IFEVCWNKEGDK+AAC N V VLDFRM
Sbjct: 543 DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 594
Score = 56.6 bits (135), Expect = 8e-06
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Frame = -2
Query: 641 CQWDPTGSLLASSSDDTTVKIWSLKQDNYIHD-----------------FREHRKEVLIS 513
C W+PTGSLLAS S D+T +IW + + E K+V
Sbjct: 252 CAWNPTGSLLASGSGDSTARIWPIADGSSRSGGQSGPLNVLVLKHVKGRTNEKSKDVTTL 311
Query: 512 RWSPTGQGTSNPNKQLVLASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYL 333
W+ G GT +LA+ S+D + W G+L + H+ ++S+ ++ G+YL
Sbjct: 312 DWN--GDGT-------LLATGSYDGQARIWST-NGELRSTLSKHKGPIFSLKWNKKGDYL 361
Query: 332 ASGS 321
+GS
Sbjct: 362 LTGS 365
>ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ricinus communis]
gi|223535779|gb|EEF37441.1| Polyadenylation factor
subunit, putative [Ricinus communis]
Length = 582
Score = 177 bits (449), Expect(3) = 4e-94
Identities = 80/106 (75%), Positives = 91/106 (85%)
Frame = -2
Query: 638 QWDPTGSLLASSSDDTTVKIWSLKQDNYIHDFREHRKEVLISRWSPTGQGTSNPNKQLVL 459
+WDPTGSLLAS SDD + KIWS+KQD Y+HD REH KE+ RWSPTG GT+NPN+QLVL
Sbjct: 424 KWDPTGSLLASCSDDISAKIWSMKQDKYVHDLREHSKEIYTIRWSPTGPGTNNPNQQLVL 483
Query: 458 ASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYLASGS 321
ASASFDSTVK WDVE GKL+C +GHRD VYS+AFSP+GEYLASGS
Sbjct: 484 ASASFDSTVKLWDVELGKLLCTLSGHRDPVYSVAFSPNGEYLASGS 529
Score = 138 bits (347), Expect(3) = 4e-94
Identities = 64/105 (60%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Frame = -3
Query: 949 IWTSDGELKGTLRKHKEAIVSIKWNRKGDYVLTGSLDTTAIVWDVKTNDLIQHFELHSGQ 770
IW + GELK TL KHK I S+KWN+KGD++LTGS D TAIVWDVKT + Q FE HSG
Sbjct: 319 IWNTSGELKTTLSKHKGPIFSLKWNKKGDFLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 378
Query: 769 VLDIDWCDDASFA-ASTEKLIHVCKIGTNCPVKTFPGHLDEVNSV 638
+LD+DW ++ SFA +ST+ +I+VC++G N PVKTF GH EVN V
Sbjct: 379 ILDVDWRNNTSFATSSTDNMIYVCRVGDNRPVKTFAGHQGEVNCV 423
Score = 78.2 bits (191), Expect(3) = 4e-94
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -3
Query: 316 DNSLNIWSVKTGKIVKSYAGKGIIFEVCWNKEGDKVAACNNRNHVFVLDFRM 161
D S+NIWS+K KIVK+Y G+G IFEVCWNKEGDK+AAC N V VLD RM
Sbjct: 531 DRSINIWSLKEVKIVKTYTGQGGIFEVCWNKEGDKIAACFANNTVCVLDLRM 582
Score = 57.8 bits (138), Expect = 4e-06
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Frame = -2
Query: 641 CQWDPTGSLLASSSDDTTVKIWSLKQDNYIHDFR-----------------EHRKEVLIS 513
C W PTGSLLAS S D+T +IW++ + + E K+V
Sbjct: 240 CAWSPTGSLLASGSGDSTARIWAIAEGTSRSGVQNGPLNVLVLKHVKGRTNEKSKDVTTL 299
Query: 512 RWSPTGQGTSNPNKQLVLASASFDSTVKTWDVEQGKLICNFNGHRDAVYSIAFSPDGEYL 333
W+ G+GT +LA+ S+D + W+ G+L + H+ ++S+ ++ G++L
Sbjct: 300 DWN--GEGT-------LLATGSYDGQARIWNT-SGELKTTLSKHKGPIFSLKWNKKGDFL 349
Query: 332 ASGS 321
+GS
Sbjct: 350 LTGS 353