BLASTX nr result

ID: Cnidium21_contig00009833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009833
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB82966.1| putative protein [Arabidopsis thaliana]               105   6e-21
gb|AAG13541.1|AC023240_14 putative Tam3-transposase [Oryza sativ...   101   1e-19
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...   100   2e-19
ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group] g...    99   4e-19
gb|AAP54387.2| hAT family dimerisation domain containing protein...    99   4e-19

>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score =  105 bits (262), Expect = 6e-21
 Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
 Frame = +3

Query: 3   RYLADE----PINPMTCSFSILDWWKENSGKYKYLSLMAKDILVIPVSTVASESAFSTSG 170
           +YL DE      N +   F +LDWWK NS KY  +SLMA+++L IPVS+VASESAFST G
Sbjct: 578 KYLKDELHVTTENSLGLPFDLLDWWKTNSSKYPIMSLMAREVLAIPVSSVASESAFSTGG 637

Query: 171 RILDSFRSSLSPKMLEALVCTQSWLKQGY--AGIKSREHLDEAEYYKFLE 314
           RILD +RS L+P M+EALV TQ WL+       +KS + L+E    KF++
Sbjct: 638 RILDQYRSCLTPDMVEALVLTQDWLRASLRSEAMKSLDKLEEEN--KFMD 685


>gb|AAG13541.1|AC023240_14 putative Tam3-transposase [Oryza sativa Japonica Group]
          Length = 568

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/87 (56%), Positives = 62/87 (71%)
 Frame = +3

Query: 3   RYLADEPINPMTCSFSILDWWKENSGKYKYLSLMAKDILVIPVSTVASESAFSTSGRILD 182
           RYL DE ++  T +F ILDWWK     +  L  +A+DI  IPVSTVASESAFSTSGR+L 
Sbjct: 472 RYLEDELVSINTENFKILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLS 531

Query: 183 SFRSSLSPKMLEALVCTQSWLKQGYAG 263
             RS L+P++LEAL+C+Q WL+  Y G
Sbjct: 532 EHRSRLTPELLEALMCSQDWLRNKYRG 558


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/107 (44%), Positives = 72/107 (67%)
 Frame = +3

Query: 48  SILDWWKENSGKYKYLSLMAKDILVIPVSTVASESAFSTSGRILDSFRSSLSPKMLEALV 227
           ++L+WWK NSG+Y  L+ +A+D+L IP++TVASES FSTS R+LD +RSSL+P  +EAL+
Sbjct: 582 NVLEWWKVNSGRYPILAKIARDVLAIPITTVASESTFSTSERVLDPYRSSLTPTTIEALI 641

Query: 228 CTQSWLKQGYAGIKSREHLDEAEYYKFLEEDAGKKANAMSNEAINVD 368
           CTQ WLK   + + + E  +  E  +  +   GK+   ++   I VD
Sbjct: 642 CTQDWLKGASSSLITTEDFENLELLE--QGQMGKEKAQINIVVIGVD 686


>ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group]
           gi|21671885|gb|AAM74247.1|AC074355_9 Putative
           transposable element [Oryza sativa Japonica Group]
           gi|31430424|gb|AAP52341.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa
           Japonica Group]
          Length = 772

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +3

Query: 3   RYLADEPINPMTCSFSILDWWKENSGKYKYLSLMAKDILVIPVSTVASESAFSTSGRILD 182
           RYL DE ++  T +F ILDWWK     +  L  +A+DI  IPVSTVASESAFSTSGR+L 
Sbjct: 661 RYLEDELVSINTENFKILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLS 720

Query: 183 SFRSSLSPKMLEALVCTQSWLKQGY 257
             RS L+P++LEAL+C+Q WL+  Y
Sbjct: 721 EHRSRLTPELLEALMCSQDWLRNKY 745


>gb|AAP54387.2| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 756

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +3

Query: 3   RYLADEPINPMTCSFSILDWWKENSGKYKYLSLMAKDILVIPVSTVASESAFSTSGRILD 182
           RYL DE ++  T +F ILDWWK     +  L  +A+DI  IPVSTVASESAFSTSGR+L 
Sbjct: 645 RYLEDELVSINTENFKILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLS 704

Query: 183 SFRSSLSPKMLEALVCTQSWLKQGY 257
             RS L+P++LEAL+C+Q WL+  Y
Sbjct: 705 EHRSRLTPELLEALMCSQDWLRNKY 729


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