BLASTX nr result

ID: Cnidium21_contig00009823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009823
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|AFK48292.1| unknown [Lotus japonicus]                               57   1e-06
ref|XP_002511462.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
 Frame = +3

Query: 27  MDRNDSYGNTWADQWESNSDDRNHYTSLQDNNKSTSSGS--KYGNKLGQGLXXXXXXXXX 200
           M  N S+  +WADQW+ N D      ++ D++K +SS S  KY  K+G+GL         
Sbjct: 1   MSGNSSHETSWADQWDYNPDP-----AVYDHSKDSSSDSTAKYKQKVGEGLGKTKQVAST 55

Query: 201 XXXXXXXXXXLTFQWIKNKYTKTTQKH 281
                     + F+WIK+KY KTTQKH
Sbjct: 56  GIKKVKEGTSVGFRWIKDKYQKTTQKH 82


>gb|AFK48292.1| unknown [Lotus japonicus]
          Length = 84

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = +3

Query: 39  DSYGNTWADQWESNSDDRNHYTSLQDNNKSTSSG--SKYGNKLGQGLXXXXXXXXXXXXX 212
           +SYG +WADQW+   D       +  NNKS   G  +KY  KLG+GL             
Sbjct: 6   NSYGTSWADQWDDGPDP----IMVGSNNKSNGGGATTKYKEKLGEGLGKTKTVASSGIKK 61

Query: 213 XXXXXXLTFQWIKNKYTKTTQKH 281
                 +   WIK KY+K TQKH
Sbjct: 62  LKDGTSVGIHWIKTKYSKATQKH 84


>ref|XP_002511462.1| conserved hypothetical protein [Ricinus communis]
           gi|223550577|gb|EEF52064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/76 (38%), Positives = 38/76 (50%)
 Frame = +3

Query: 54  TWADQWESNSDDRNHYTSLQDNNKSTSSGSKYGNKLGQGLXXXXXXXXXXXXXXXXXXXL 233
           +WADQW+   D  + Y + + N  STSS +KY  K+G+GL                    
Sbjct: 8   SWADQWDDGPDPVHDYQNSKSN--STSSTAKYKQKVGEGLGKTKEVASTGFKKVKEGTVS 65

Query: 234 TFQWIKNKYTKTTQKH 281
            F WIK+KY K TQKH
Sbjct: 66  GFHWIKDKYQKKTQKH 81


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