BLASTX nr result

ID: Cnidium21_contig00009786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009786
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, p...   102   8e-20
ref|XP_002300042.1| predicted protein [Populus trichocarpa] gi|2...    95   1e-17
emb|CBI34890.3| unnamed protein product [Vitis vinifera]               89   7e-16
ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltra...    80   3e-13
ref|XP_002873678.1| hypothetical protein ARALYDRAFT_488299 [Arab...    80   6e-13

>ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
            communis] gi|223536030|gb|EEF37688.1| polyribonucleotide
            nucleotidyltransferase, putative [Ricinus communis]
          Length = 958

 Score =  102 bits (254), Expect = 8e-20
 Identities = 61/151 (40%), Positives = 89/151 (58%)
 Frame = -3

Query: 720  RNSNSRPKTSSNKRSDNKSKAVSPQKNDRDSPISAFDLFSSKNSSELKTGFKSIFRINEI 541
            R+SN+ PK     + D+K K  +P K D  SP+         NS+ L             
Sbjct: 831  RDSNNAPKILWTAKRDHKLK-TNPPKYDSHSPV--------PNSNSL------------- 868

Query: 540  EDGNTSASRDVLNHKEAQAEAPINAKNLKIGSEVSAKVHQIRAHXXXXXXXXXXXGMYKF 361
                 S +++ LN+ E + E+PINA+NLK+G++V+AKV+QIR H           GM++F
Sbjct: 869  -----SHTKNKLNNVENEVESPINARNLKLGTKVAAKVYQIRKHGLVLDLGGEVRGMFRF 923

Query: 360  ELGGKRDFEVGEEVQVKCSSFSIKGVPVMSM 268
            E  GKRDFEVG+E++VKC++FS KG+PVMS+
Sbjct: 924  EENGKRDFEVGDELRVKCTNFSSKGIPVMSL 954


>ref|XP_002300042.1| predicted protein [Populus trichocarpa] gi|222847300|gb|EEE84847.1|
            predicted protein [Populus trichocarpa]
          Length = 961

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 8/157 (5%)
 Frame = -3

Query: 714  SNSRPKTSSNKRSDNKSKAVSPQKNDRDSPISAFDLFSSKNSSELKTGFKSIFRINEIED 535
            S  +P TSSN     +S A   ++ D+   ++     +SK     K   K   ++ E +D
Sbjct: 802  STVKPSTSSNPGFLIRSAAECDEE-DKTVSLNQGSKSNSKTLRATKRDRKRKTKVPESDD 860

Query: 534  --------GNTSASRDVLNHKEAQAEAPINAKNLKIGSEVSAKVHQIRAHXXXXXXXXXX 379
                    G++S + D LN ++A+  +P++AK+LK+G +++AKV+QIRA           
Sbjct: 861  SDASIYSSGHSSHTVDRLNDEDAKVVSPLSAKSLKLGMKIAAKVYQIRALGLVLDLGNGV 920

Query: 378  XGMYKFELGGKRDFEVGEEVQVKCSSFSIKGVPVMSM 268
             GMY+FE  GKRDFE+G+E+ VKC+SFS KG+PVMS+
Sbjct: 921  RGMYRFETNGKRDFEIGDELLVKCTSFSSKGLPVMSL 957


>emb|CBI34890.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 8/160 (5%)
 Frame = -3

Query: 723  VRNSNSRPKTSSNKRSDNKSKAVSPQKNDRDSPISAFDLFSSKNSSELKTGFKSIFRINE 544
            + +S +  K  S   S++K K   PQ    DS   A ++  SK SS+ +    SIF I  
Sbjct: 745  LEDSRNTSKPRSISGSNDKLKTSPPQNGMSDS---AKNVKKSKISSQKEKDINSIFTILS 801

Query: 543  I-EDGN------TSASRDVLNHKEAQAEAPINAKNLKIGSEVSAKVHQIRAHXXXXXXXX 385
            + EDG+       + S++ LN  +   E    AKNLK+G +++AKV+QIR H        
Sbjct: 802  MGEDGDKHGSAFNANSQNDLNDTKEVPETCTGAKNLKLGMKLNAKVYQIRTHGLVLDLGG 861

Query: 384  XXXGMYKFELGG-KRDFEVGEEVQVKCSSFSIKGVPVMSM 268
               GMY+FE    KRDF+VG+E+ V CSSFS KG+PVMS+
Sbjct: 862  GIRGMYRFEGDNDKRDFKVGDELHVMCSSFSTKGIPVMSL 901


>ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltransferase-like [Vitis
            vinifera]
          Length = 964

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 59/157 (37%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
 Frame = -3

Query: 735  SAGSVRNSNSRPKTSSNKRSDNKSKAVSPQKNDRDSPISAFDLFSSKNSSELKTGFKSIF 556
            SAG  ++S +  K  S   S++K K  SP +ND D   SAF                   
Sbjct: 833  SAGFNQSSRNTSKPRSISGSNDKLKT-SPPQNDGDKHGSAF------------------- 872

Query: 555  RINEIEDGNTSASRDVLNHKEAQAEAPINAKNLKIGSEVSAKVHQIRAHXXXXXXXXXXX 376
                    N ++  D+ + KE   E    AKNLK+G +++AKV+QIR H           
Sbjct: 873  --------NANSQNDLNDTKEVP-ETCTGAKNLKLGMKLNAKVYQIRTHGLVLDLGGGIR 923

Query: 375  GMYKFELGG-KRDFEVGEEVQVKCSSFSIKGVPVMSM 268
            GMY+FE    KRDF+VG+E+ V CSSFS KG+PVMS+
Sbjct: 924  GMYRFEGDNDKRDFKVGDELHVMCSSFSTKGIPVMSL 960


>ref|XP_002873678.1| hypothetical protein ARALYDRAFT_488299 [Arabidopsis lyrata subsp.
            lyrata] gi|297319515|gb|EFH49937.1| hypothetical protein
            ARALYDRAFT_488299 [Arabidopsis lyrata subsp. lyrata]
          Length = 992

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
 Frame = -3

Query: 717  NSNSRPKTSSNKRSDNK-----SKAVSPQKNDRDSPISAFDLFSSKNSSELKTG--FKSI 559
            N N +PK ++  + D K     SK  + QK +      A +   ++    LK     KS 
Sbjct: 821  NKNDKPKRATTPKPDRKPKSTASKLTATQKEEEVLESIAPEETPAECGETLKQDGKLKSA 880

Query: 558  FRINEIEDGNTSAS--------RDVLNHKEAQAEAPINAKNLKIGSEVSAKVHQIRAHXX 403
               N   D N  +S        ++  +  +A+  A ++ +NLKIG+E++AKVH+IRA   
Sbjct: 881  SPKNSSTDSNLVSSSKAKKSTRKENQSENKAEESAFVSTRNLKIGTEMTAKVHEIRARGL 940

Query: 402  XXXXXXXXXGMYKFELGGKRDFEVGEEVQVKCSSFSIKGVPVMSM 268
                     GMYKF+   + +FE G+ +QVKC+SFS KG+PVM++
Sbjct: 941  VLDLGGELRGMYKFKEDEETEFEEGDTLQVKCTSFSTKGIPVMAL 985


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