BLASTX nr result

ID: Cnidium21_contig00009769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009769
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Viti...   167   4e-39
emb|CAN64319.1| hypothetical protein VITISV_027918 [Vitis vinifera]   167   4e-39
ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata...   164   2e-38
ref|XP_002329887.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
ref|XP_002303539.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37

>ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera]
           gi|297742670|emb|CBI34819.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  167 bits (423), Expect = 4e-39
 Identities = 80/109 (73%), Positives = 86/109 (78%)
 Frame = -3

Query: 875 MGDMLAWXXXXXXXXXXXXLVVYQLMCLADLEFDYINPYDSASRINLVILPEFITEGVLC 696
           MGD+ AW            LVVYQLMCLADLEFDYINPYDSASRIN V+LPEFIT+GVLC
Sbjct: 1   MGDLFAWIFSFFILIALLVLVVYQLMCLADLEFDYINPYDSASRINKVVLPEFITQGVLC 60

Query: 695 FLYLVTGHWIMSLFSIPYLYYNVRLYMRRQHLIDVTEIFNQLDWEKKKR 549
             Y +TGHW MSL   PYLYYNVRLY RRQHLIDVTEIFN L+WEKK+R
Sbjct: 61  LFYSLTGHWFMSLLCGPYLYYNVRLYQRRQHLIDVTEIFNLLNWEKKQR 109


>emb|CAN64319.1| hypothetical protein VITISV_027918 [Vitis vinifera]
          Length = 149

 Score =  167 bits (423), Expect = 4e-39
 Identities = 80/109 (73%), Positives = 86/109 (78%)
 Frame = -3

Query: 875 MGDMLAWXXXXXXXXXXXXLVVYQLMCLADLEFDYINPYDSASRINLVILPEFITEGVLC 696
           MGD+ AW            LVVYQLMCLADLEFDYINPYDSASRIN V+LPEFIT+GVLC
Sbjct: 1   MGDLFAWIFSFFILIALLVLVVYQLMCLADLEFDYINPYDSASRINKVVLPEFITQGVLC 60

Query: 695 FLYLVTGHWIMSLFSIPYLYYNVRLYMRRQHLIDVTEIFNQLDWEKKKR 549
             Y +TGHW MSL   PYLYYNVRLY RRQHLIDVTEIFN L+WEKK+R
Sbjct: 61  LFYSLTGHWFMSLLCGPYLYYNVRLYQRRQHLIDVTEIFNLLNWEKKQR 109


>ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335774|gb|EFH66191.1| cornichon family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score =  164 bits (416), Expect = 2e-38
 Identities = 78/132 (59%), Positives = 93/132 (70%)
 Frame = -3

Query: 875 MGDMLAWXXXXXXXXXXXXLVVYQLMCLADLEFDYINPYDSASRINLVILPEFITEGVLC 696
           MGD+ AW            ++VYQL+CLADLEFDYINPYDSASRIN V+LPEFI +GVLC
Sbjct: 1   MGDIWAWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 695 FLYLVTGHWIMSLFSIPYLYYNVRLYMRRQHLIDVTEIFNQLDWEKKKRXXXXXXXXXXX 516
             YL+TGHW+M+L  +PYLYYN +LY +RQHL+DVTEIFN L+WEKKKR           
Sbjct: 61  VFYLLTGHWVMTLLCLPYLYYNFQLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 515 XXXXXXLIYSAL 480
                 +IYSAL
Sbjct: 121 FLTIFWMIYSAL 132


>ref|XP_002329887.1| predicted protein [Populus trichocarpa] gi|222871124|gb|EEF08255.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  162 bits (410), Expect = 1e-37
 Identities = 74/109 (67%), Positives = 86/109 (78%)
 Frame = -3

Query: 875 MGDMLAWXXXXXXXXXXXXLVVYQLMCLADLEFDYINPYDSASRINLVILPEFITEGVLC 696
           MGD+  W            +V++QLM LADLEFDYINPYDS+SRIN VILPE+ITEGVLC
Sbjct: 1   MGDLFVWLIAFFILIALLVIVIFQLMALADLEFDYINPYDSSSRINKVILPEYITEGVLC 60

Query: 695 FLYLVTGHWIMSLFSIPYLYYNVRLYMRRQHLIDVTEIFNQLDWEKKKR 549
             +L+TGHW MSL  IPYLYYNVRLY +RQHL+DVTEIFN L+WEKK+R
Sbjct: 61  LFFLITGHWCMSLLCIPYLYYNVRLYTQRQHLVDVTEIFNMLNWEKKQR 109


>ref|XP_002303539.1| predicted protein [Populus trichocarpa] gi|222840971|gb|EEE78518.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  162 bits (410), Expect = 1e-37
 Identities = 74/109 (67%), Positives = 85/109 (77%)
 Frame = -3

Query: 875 MGDMLAWXXXXXXXXXXXXLVVYQLMCLADLEFDYINPYDSASRINLVILPEFITEGVLC 696
           MGD+  W            +V++QLM LADLEFDYINPYDS+SRIN VILPE+ITEGVLC
Sbjct: 1   MGDLFVWLISFFILISLIVIVIFQLMALADLEFDYINPYDSSSRINKVILPEYITEGVLC 60

Query: 695 FLYLVTGHWIMSLFSIPYLYYNVRLYMRRQHLIDVTEIFNQLDWEKKKR 549
             +LVTGHW MSL  +PYLYYN RLY RRQHL+DVTEIFN L+WEKK+R
Sbjct: 61  LFFLVTGHWCMSLLCVPYLYYNARLYTRRQHLVDVTEIFNMLNWEKKQR 109


Top