BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009764
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...   117   2e-24
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]   113   3e-23
ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana...   111   1e-22
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid...   111   1e-22
ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloro...    99   5e-19

>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score =  117 bits (293), Expect = 2e-24
 Identities = 62/114 (54%), Positives = 73/114 (64%)
 Frame = +3

Query: 63  MASLILGAPPMASHFKPTFSPHISSPHSQTLGQSFTSCTTSLSVAPITPPSYPSIYCGRG 242
           MA+LILGAP +A       S   S   S+TL  SF +   SLS++  +PP  PS+YCGRG
Sbjct: 1   MAALILGAPAIAPQ-SLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPPPIPSVYCGRG 59

Query: 243 DKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDKFDDGQVVKIEID 404
           DKKTAKGKRFNHSFGNARPRNK K               KD+F+D +VVKIEID
Sbjct: 60  DKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEID 113


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score =  113 bits (282), Expect = 3e-23
 Identities = 62/114 (54%), Positives = 73/114 (64%)
 Frame = +3

Query: 63  MASLILGAPPMASHFKPTFSPHISSPHSQTLGQSFTSCTTSLSVAPITPPSYPSIYCGRG 242
           MA+LILGAP +A       S   S   S+TL  SF +   SLS++  +PP  PS+YCGRG
Sbjct: 1   MAALILGAPAIAPQ-SLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPP-IPSVYCGRG 58

Query: 243 DKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDKFDDGQVVKIEID 404
           DKKTAKGKRFNHSFGNARPRNK K               KD+F+D +VVKIEID
Sbjct: 59  DKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEID 112


>ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| 30S ribosomal protein S31
           [Arabidopsis thaliana]
          Length = 118

 Score =  111 bits (277), Expect = 1e-22
 Identities = 58/114 (50%), Positives = 73/114 (64%)
 Frame = +3

Query: 63  MASLILGAPPMASHFKPTFSPHISSPHSQTLGQSFTSCTTSLSVAPITPPSYPSIYCGRG 242
           MASLILGAPP  +   P  S  +SS HS+T G S +  T   S++  +  S P +YCGRG
Sbjct: 1   MASLILGAPPRVTVALP--SSRLSSSHSETAGVSLSCFTHQFSLSTSSSSSIPLVYCGRG 58

Query: 243 DKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDKFDDGQVVKIEID 404
           D+KTAKGKRFNHSFGNARPRNK+K               KDKF++ + +KI+ID
Sbjct: 59  DRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDID 112


>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
           lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
           ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  111 bits (277), Expect = 1e-22
 Identities = 58/114 (50%), Positives = 72/114 (63%)
 Frame = +3

Query: 63  MASLILGAPPMASHFKPTFSPHISSPHSQTLGQSFTSCTTSLSVAPITPPSYPSIYCGRG 242
           MASLILGAPP  +      S  +SS HS+T G S +  T   S++  +  S P +YCGRG
Sbjct: 1   MASLILGAPPRVT--VALSSSRLSSSHSETAGVSLSCSTHQFSLSTSSSSSIPLVYCGRG 58

Query: 243 DKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDKFDDGQVVKIEID 404
           D+KTAKGKRFNHSFGNARPRNKNK               KDKF++ + +KI+ID
Sbjct: 59  DRKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDID 112


>ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Glycine
           max]
          Length = 121

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 55/115 (47%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = +3

Query: 63  MASLILGAPPMASHFKPTFSPHISSPHSQTLGQSFTSCTTSLSVAPITPPS-YPSIYCGR 239
           MASL+L +P   S      + H+S  HSQTL    ++   SLS +  T  S  PS+YCGR
Sbjct: 1   MASLLLASPSPLSVQLHNSTCHLSFSHSQTLSSPLSTSFPSLSASATTTLSPTPSVYCGR 60

Query: 240 GDKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDKFDDGQVVKIEID 404
           GD+KTAKGKRF HSFGNARP++K K               KD+ +D +VVKIEID
Sbjct: 61  GDRKTAKGKRFAHSFGNARPKDKKKGRGPLRPYAPPAPSKKDRLEDNEVVKIEID 115