BLASTX nr result

ID: Cnidium21_contig00009759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009759
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                            72   5e-11
emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]                  72   6e-11
gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    71   8e-11
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...    69   5e-10
gb|ABD78322.1| polyprotein [Primula vulgaris]                          69   5e-10

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = -3

Query: 282 SMQVPVANGNHLTSKHECADLKWVVGEHEFQTTNRTLPLESHDLVLGVDWLGSLGPVTFD 103
           ++ V VA+GN L S   C   KW +   EF+     LPL   D+VLGV WL  LGP+ +D
Sbjct: 53  AVNVTVADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWD 112

Query: 102 FKNLLLQFKQEGQVVTLKGNVAP 34
           F  L ++F+ +GQ + L+G+  P
Sbjct: 113 FSKLRMEFQFQGQKIVLRGSSGP 135


>emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]
          Length = 267

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = -3

Query: 279 MQVPVANGNHLTSKHECADLKWVVGEHEFQTTNRTLPLESHDLVLGVDWLGSLGPVTFDF 100
           + V VANG+H+TS   C      + + +F     T+PL+  D+VLGV WLGSLGP+T+DF
Sbjct: 106 LSVAVANGDHVTSGGICRATLISIDKEDFILDFLTIPLDGFDVVLGVQWLGSLGPITWDF 165

Query: 99  KNLLLQFKQEGQVVTLKGNVAPG 31
            + +++F+++G+ +   G   PG
Sbjct: 166 HHRMMRFQRQGREIVWHGANPPG 188


>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/81 (40%), Positives = 52/81 (64%)
 Frame = -3

Query: 282  SMQVPVANGNHLTSKHECADLKWVVGEHEFQTTNRTLPLESHDLVLGVDWLGSLGPVTFD 103
            S QV VANG  L+ + E A++ W V  H F +  + LPL+S+D++LG+DWL    P+  D
Sbjct: 794  SFQVKVANGQMLSCETELANVSWSVQGHHFCSALKVLPLQSYDMILGMDWLERYSPMDID 853

Query: 102  FKNLLLQFKQEGQVVTLKGNV 40
            ++   ++F  +GQ++TL G V
Sbjct: 854  WQQKTIRFTLDGQLITLCGVV 874


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/81 (39%), Positives = 48/81 (59%)
 Frame = -3

Query: 282 SMQVPVANGNHLTSKHECADLKWVVGEHEFQTTNRTLPLESHDLVLGVDWLGSLGPVTFD 103
           S+QV V NG+ L  K  C     ++ +H F  T R LP+   D+VLGV+WL +LGP+  D
Sbjct: 347 SLQVMVGNGSVLECKQSCPATTLLLQQHSFTVTLRVLPISGADVVLGVEWLRTLGPIITD 406

Query: 102 FKNLLLQFKQEGQVVTLKGNV 40
           + +  +QF   GQ + L+ +V
Sbjct: 407 YTSFTMQFTHLGQPIILRADV 427


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/78 (42%), Positives = 47/78 (60%)
 Frame = -3

Query: 279 MQVPVANGNHLTSKHECADLKWVVGEHEFQTTNRTLPLESHDLVLGVDWLGSLGPVTFDF 100
           M+V +ANG+ + S   C  +K ++ E++F+     LPL  +DLVLGV WL  LG +  DF
Sbjct: 333 MEVKIANGDKIKSSGTCEKVKLLIQENQFEVDFLLLPLVGYDLVLGVHWLSQLGVINCDF 392

Query: 99  KNLLLQFKQEGQVVTLKG 46
           KNL + F    + V LKG
Sbjct: 393 KNLTMTFTHGNKKVCLKG 410


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