BLASTX nr result

ID: Cnidium21_contig00009721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009721
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a...   127   4e-27
ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [...   122   1e-25
ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [...   122   1e-25
ref|XP_004140409.1| PREDICTED: 60S ribosomal protein L23a-like i...   122   1e-25
ref|XP_004140408.1| PREDICTED: 60S ribosomal protein L23a-like i...   122   1e-25

>sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a
           gi|13560777|gb|AAK30202.1|AF349961_1 ribosome protein
           L23a [Daucus carota]
          Length = 154

 Score =  127 bits (318), Expect = 4e-27
 Identities = 72/118 (61%), Positives = 72/118 (61%)
 Frame = -2

Query: 660 RTSVTFHRPRTLTKDRNPKYPRISATPRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 481
           RTSVTFHRPRTLTKDRNPKYPRISATPRNKL                             
Sbjct: 39  RTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIV 98

Query: 480 XXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 307
                            MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 99  DIRANKKKIKDAVKK--MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449519086|ref|XP_004166566.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/118 (58%), Positives = 70/118 (59%)
 Frame = -2

Query: 660 RTSVTFHRPRTLTKDRNPKYPRISATPRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 481
           RTSVTFHRP+TL KDRNPKYPRIS TPRNKL                             
Sbjct: 38  RTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIV 97

Query: 480 XXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 307
                            MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 98  DIRADKKKIKDAVKK--MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449514958|ref|XP_004164525.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/118 (58%), Positives = 70/118 (59%)
 Frame = -2

Query: 660 RTSVTFHRPRTLTKDRNPKYPRISATPRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 481
           RTSVTFHRP+TL KDRNPKYPRIS TPRNKL                             
Sbjct: 38  RTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIV 97

Query: 480 XXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 307
                            MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 98  DIRANKKNIKDAVKK--MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004140409.1| PREDICTED: 60S ribosomal protein L23a-like isoform 3 [Cucumis
           sativus] gi|449498367|ref|XP_004160519.1| PREDICTED: 60S
           ribosomal protein L23a-like isoform 3 [Cucumis sativus]
          Length = 146

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/118 (58%), Positives = 70/118 (59%)
 Frame = -2

Query: 660 RTSVTFHRPRTLTKDRNPKYPRISATPRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 481
           RTSVTFHRP+TL KDRNPKYPRIS TPRNKL                             
Sbjct: 31  RTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIV 90

Query: 480 XXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 307
                            MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 91  DIRADKKKIKDAVKK--MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 146


>ref|XP_004140408.1| PREDICTED: 60S ribosomal protein L23a-like isoform 2 [Cucumis
           sativus] gi|449498363|ref|XP_004160518.1| PREDICTED: 60S
           ribosomal protein L23a-like isoform 2 [Cucumis sativus]
          Length = 152

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/118 (58%), Positives = 70/118 (59%)
 Frame = -2

Query: 660 RTSVTFHRPRTLTKDRNPKYPRISATPRNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 481
           RTSVTFHRP+TL KDRNPKYPRIS TPRNKL                             
Sbjct: 37  RTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIV 96

Query: 480 XXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 307
                            MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 97  DIRADKKKIKDAVKK--MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152


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