BLASTX nr result

ID: Cnidium21_contig00009719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009719
         (1513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   408   e-111
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   406   e-111
ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]         385   e-104
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]   385   e-104

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  408 bits (1048), Expect = e-111
 Identities = 211/365 (57%), Positives = 247/365 (67%), Gaps = 23/365 (6%)
 Frame = +3

Query: 132  ISTSGTAT-------PLLHPRQVVARPPTLSMLLSRASSRGGASMLVRETAARQLEERRA 290
            +ST+ T T       PLLHPRQ   R  +L+MLL R + R G SMLVRETAA +LEERRA
Sbjct: 599  MSTTATTTAESESHAPLLHPRQEAPRAASLAMLLGRVTGRRGPSMLVRETAALELEERRA 658

Query: 291  DWGYSKPVVALDIVWNLAFVFASVMMLMWSRNEKPNVPIRVWIFVYAAQCLVHVVLVYVE 470
            DWGYSKPVVALD+VWN AFV  S+ ML+ S  EKPN PIR+WI  YA QCLVHVVLV++E
Sbjct: 659  DWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIE 718

Query: 471  F---------XXXXXXXXXXXXXVEANYXXXXXXXXXXXXRSGV---LGVSSQSSFAKKF 614
            +                      VE  +              GV      S++SS  K+ 
Sbjct: 719  YRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSSVIKRC 778

Query: 615  ESANTLVSFFWWMVGFYWVVSGGDYLLQSAPRLYWLSVVFLAFDVFFAIFCVVXXXXXXX 794
            ES NT+ SF WW+VGFYWVVSGGD LLQ+AP LYWL+VVFLAFDVFFAIFCVV       
Sbjct: 779  ESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGI 838

Query: 795  XXXXXXXXXXXXXYAVAGQEGASDADIGALQKYRFQMSNEK----AGSGRMIPLPTSSGH 962
                         YAVAGQEGAS+AD+  L KYRFQ++ E+     G+G+M+P+ TSSG+
Sbjct: 839  ALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGY 898

Query: 963  LATERIVLREDAECCICLSPYEDGTEIHSLPCNHYFHSTCVVKWLKMNATCPLCKYNILK 1142
            LA ERI+L EDAECCICL PYEDG E+H+LPCNH+FHSTC+VKWLKMNATCPLCKYNILK
Sbjct: 899  LANERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILK 958

Query: 1143 GGEQV 1157
            G EQV
Sbjct: 959  GNEQV 963


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  406 bits (1043), Expect = e-111
 Identities = 206/362 (56%), Positives = 251/362 (69%), Gaps = 10/362 (2%)
 Frame = +3

Query: 102  LSHFTFSMADISTS-GTATPLLHPRQVVA----RPPTLSMLLSRASSRGGASMLVRETAA 266
            L     +M++ ST+ GT  PLL PRQ  A    RP TL++L+ RA+ R G SMLVRETAA
Sbjct: 1938 LQFLLLTMSETSTTTGTTAPLLRPRQGTAEQSARPTTLALLMGRATGRRGPSMLVRETAA 1997

Query: 267  RQLEERRADWGYSKPVVALDIVWNLAFVFASVMMLMWSRNEKPNVPIRVWIFVYAAQCLV 446
            R+LEERRADWGYSKPVVALD++WN++FV  S++ML+ +  E+PN PIR+WI  YA QC V
Sbjct: 1998 RELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGV 2057

Query: 447  HVVLVYVEFXXXXXXXXXXXXXVEA--NYXXXXXXXXXXXXRSGVLGVSSQSSFAKKFES 620
            HVVLV++E+              +   +              S   G  +QSS  K+ ES
Sbjct: 2058 HVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCES 2117

Query: 621  ANTLVSFFWWMVGFYWVVSGGDYLLQSAPRLYWLSVVFLAFDVFFAIFCVVXXXXXXXXX 800
             NT+ SF WW+VGFYWVVSGG+ LLQ+APRLYWL+VVFLAFDVFFAIFCVV         
Sbjct: 2118 VNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 2177

Query: 801  XXXXXXXXXXXYAVAGQEGASDADIGALQKYRFQMSNEK---AGSGRMIPLPTSSGHLAT 971
                       YAVAGQEGAS+AD+  L +YRF+ +NE+    G+G MIP  TSSG+LA 
Sbjct: 2178 CCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEANNEEKSGVGAGTMIPTETSSGYLAN 2237

Query: 972  ERIVLREDAECCICLSPYEDGTEIHSLPCNHYFHSTCVVKWLKMNATCPLCKYNILKGGE 1151
            ERI+L EDAECCICLS YEDG E+H+LPCNH+FHSTC+ KWLKMNATCPLCKYNILKG E
Sbjct: 2238 ERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSE 2297

Query: 1152 QV 1157
            Q+
Sbjct: 2298 QI 2299


>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  390 bits (1003), Expect = e-106
 Identities = 201/342 (58%), Positives = 238/342 (69%), Gaps = 9/342 (2%)
 Frame = +3

Query: 156  PLLHPRQ-----VVARPPTLSMLLSRASSRGGASMLVRETAARQLEERRADWGYSKPVVA 320
            PLL PRQ       +R  TLS LL RA+ R G SMLVRETAAR+L+ERRADWGYSKPVV+
Sbjct: 10   PLLRPRQDPPTSPTSRQTTLSALLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVS 69

Query: 321  LDIVWNLAFVFASVMMLMWSRNEKPNVPIRVWIFVYAAQCLVHVVLVYVEFXXXXXXXXX 500
            LD++WN AFV  SV ML+ +  E+PN PIR+WI  YA QCLVHVVLV++E+         
Sbjct: 70   LDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRRER 129

Query: 501  XXXXVEANYXXXXXXXXXXXXRSGVLGVSSQSSFAKKFESANTLVSFFWWMVGFYWVVSG 680
                 + +                   +S +SS  K+ ES NT+VSF WWMVGFYWVVSG
Sbjct: 130  DIESQQQSTEEENVPESDEEDDRASF-ISPRSSVTKRCESVNTMVSFLWWMVGFYWVVSG 188

Query: 681  GDYLLQSAPRLYWLSVVFLAFDVFFAIFCVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGA 860
            GD LLQ+AP LYWL+VVFLAFDVFFAIFCVV                    YAVAGQEGA
Sbjct: 189  GDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGA 248

Query: 861  SDADIGALQKYRFQM--SNEKAG--SGRMIPLPTSSGHLATERIVLREDAECCICLSPYE 1028
            S+AD+  L KY+FQM  + EK G  +G+M+P+ TSS  L TERI+L EDAECCICLSPYE
Sbjct: 249  SEADLIQLPKYKFQMIRNEEKPGIEAGKMVPVETSSRFLGTERILLPEDAECCICLSPYE 308

Query: 1029 DGTEIHSLPCNHYFHSTCVVKWLKMNATCPLCKYNILKGGEQ 1154
            DG E+H+LPCNH+FH+TC+VKWLKMNATCPLCK+NILKG EQ
Sbjct: 309  DGAELHALPCNHHFHATCIVKWLKMNATCPLCKFNILKGNEQ 350


>gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
          Length = 356

 Score =  385 bits (990), Expect = e-104
 Identities = 193/321 (60%), Positives = 227/321 (70%), Gaps = 1/321 (0%)
 Frame = +3

Query: 198  LSMLLSRASSRGGASMLVRETAARQLEERRADWGYSKPVVALDIVWNLAFVFASVMMLMW 377
            L++LL RA+ R G SMLVRETAAR+LEERR DWGYSKPVVALDI WNLAFVF S+ +L+ 
Sbjct: 39   LALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIR 98

Query: 378  SRNEKPNVPIRVWIFVYAAQCLVHVVLVYVEFXXXXXXXXXXXXXVEANYXXXXXXXXXX 557
            S +EKPN PIR+WI VYAAQCLVHVVLV+ EF             +E             
Sbjct: 99   SVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEF---KRRNARRARDMETQQQQQPDGYVTN 155

Query: 558  XXRSGVLGVSSQSSFAKKFESANTLVSFFWWMVGFYWVVSGGDYLLQSAPRLYWLSVVFL 737
                   G  S SS AK+ ES NTLVS  WW+ GFYWVV+GG+ L+Q+AP LYWL+VVFL
Sbjct: 156  ESDEDDGGQRSLSSVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFL 215

Query: 738  AFDVFFAIFCVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASDADIGALQKYRFQMSNEK 917
            AFDVFFA+FCVV                    YAVAGQEGA+DAD+  L KYR+++SNE 
Sbjct: 216  AFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYRVSNEP 275

Query: 918  A-GSGRMIPLPTSSGHLATERIVLREDAECCICLSPYEDGTEIHSLPCNHYFHSTCVVKW 1094
            + G G M+P+ TSS +L TER++LREDAECCICLSPYEDG E+H+LPCNH+FH  C+ KW
Sbjct: 276  SPGDGLMVPVETSSRYLTTERVLLREDAECCICLSPYEDGVELHALPCNHHFHYACITKW 335

Query: 1095 LKMNATCPLCKYNILKGGEQV 1157
            LKMNATCPLCKYNILK  E V
Sbjct: 336  LKMNATCPLCKYNILKNSEPV 356


>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
          Length = 361

 Score =  385 bits (988), Expect = e-104
 Identities = 193/339 (56%), Positives = 235/339 (69%), Gaps = 9/339 (2%)
 Frame = +3

Query: 135  STSGTATPLLHPRQVVA----RPPTLSMLLSRASSRGGASMLVRETAARQLEERRADWGY 302
            +T+GT  PLL PRQ  A    RP TL++L+ RA+ R G SMLVRETAAR+LEERRADWGY
Sbjct: 6    TTTGTTAPLLRPRQGTAEQSARPTTLALLMGRATGRRGPSMLVRETAARELEERRADWGY 65

Query: 303  SKPVVALDIVWNLAFVFASVMMLMWSRNEKPNVPIRVWIFVYAAQCLVHVVLVYVEFXXX 482
            SKPVVALD++WN++FV  S++ML+ +  E+PN PIR+WI  YA QC VHVVLV++E+   
Sbjct: 66   SKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRR 125

Query: 483  XXXXXXXXXXVEA--NYXXXXXXXXXXXXRSGVLGVSSQSSFAKKFESANTLVSFFWWMV 656
                       +   +              S   G  +QSS  K+ ES NT+ SF WW+V
Sbjct: 126  SRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIV 185

Query: 657  GFYWVVSGGDYLLQSAPRLYWLSVVFLAFDVFFAIFCVVXXXXXXXXXXXXXXXXXXXXY 836
            GFYWVVSGG+ LLQ+APRLYWL+VVFLAFDVFFAIFCVV                    Y
Sbjct: 186  GFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 245

Query: 837  AVAGQEGASDADIGALQKYRFQMSNEK---AGSGRMIPLPTSSGHLATERIVLREDAECC 1007
            AVAGQEGAS+AD+  L +YRF+ +NE+    G+G M P  TSSG+LA ERI+L EDAECC
Sbjct: 246  AVAGQEGASEADLSMLPRYRFEANNEEKSGVGAGTMFPTETSSGYLANERILLPEDAECC 305

Query: 1008 ICLSPYEDGTEIHSLPCNHYFHSTCVVKWLKMNATCPLC 1124
            ICLS YEDG E+H+LPCNH+FHSTC+ KWLKMNATCPLC
Sbjct: 306  ICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLC 344


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