BLASTX nr result

ID: Cnidium21_contig00009703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009703
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK05509.1| 20S proteasome beta subunit [Dimocarpus longan]        117   1e-26
ref|XP_002323800.1| predicted protein [Populus trichocarpa] gi|1...   112   4e-26
ref|XP_002888532.1| hypothetical protein ARALYDRAFT_475769 [Arab...   118   4e-26
ref|XP_002887065.1| predicted protein [Arabidopsis lyrata subsp....   118   4e-26
ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arab...   118   4e-26

>gb|AEK05509.1| 20S proteasome beta subunit [Dimocarpus longan]
          Length = 268

 Score =  117 bits (294), Expect(2) = 1e-26
 Identities = 64/118 (54%), Positives = 74/118 (62%), Gaps = 35/118 (29%)
 Frame = -1

Query: 837 VLGGVDVTGPHLHT-----------------------------------RDDGVALVRGA 763
           VLGGVDVTGPHLHT                                   RD+G+ LV  A
Sbjct: 133 VLGGVDVTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTRDEGIKLVVEA 192

Query: 762 I*SGIFSDLGSGSNVDICVITKGNKEYLRNYEMPNPRTFTSEKIYSFSKKTEILTAKV 589
           I SGIF+DLGSGSNVD+CVITKG+KEYLRN+ +PNPRTF S K YSFSKKTE+L+ K+
Sbjct: 193 ICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVSSKGYSFSKKTEVLSTKI 250



 Score = 28.5 bits (62), Expect(2) = 1e-26
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 586 PLRELVEVVEAGDAME 539
           PL+E VE++E GDAME
Sbjct: 252 PLKERVEIIEGGDAME 267


>ref|XP_002323800.1| predicted protein [Populus trichocarpa] gi|118484467|gb|ABK94109.1|
           unknown [Populus trichocarpa]
           gi|222866802|gb|EEF03933.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score =  112 bits (280), Expect(2) = 4e-26
 Identities = 59/118 (50%), Positives = 72/118 (61%), Gaps = 35/118 (29%)
 Frame = -1

Query: 837 VLGGVDVTGPHLHT-----------------------------------RDDGVALVRGA 763
           VLGGVD TGPHLHT                                   RD+G+ LV  A
Sbjct: 138 VLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESKYKEGLSRDEGIKLVSEA 197

Query: 762 I*SGIFSDLGSGSNVDICVITKGNKEYLRNYEMPNPRTFTSEKIYSFSKKTEILTAKV 589
           + SGIF+DLGSGSNVD+CVITKG+KEYLRN+ +PNPRT+ +E+ YSF KKTE+L  K+
Sbjct: 198 VCSGIFNDLGSGSNVDVCVITKGHKEYLRNHMLPNPRTYVTERGYSFPKKTEVLMTKI 255



 Score = 32.3 bits (72), Expect(2) = 4e-26
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -3

Query: 595 KGTPLRELVEVVEAGDAME 539
           K TPLRE VEV+E GDAME
Sbjct: 254 KITPLRERVEVIEGGDAME 272


>ref|XP_002888532.1| hypothetical protein ARALYDRAFT_475769 [Arabidopsis lyrata subsp.
           lyrata] gi|297334373|gb|EFH64791.1| hypothetical protein
           ARALYDRAFT_475769 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  118 bits (295), Expect(2) = 4e-26
 Identities = 64/118 (54%), Positives = 72/118 (61%), Gaps = 35/118 (29%)
 Frame = -1

Query: 837 VLGGVDVTGPHLHT-----------------------------------RDDGVALVRGA 763
           VLGGVD+TGPHLHT                                   RD+G+ LV  A
Sbjct: 138 VLGGVDITGPHLHTLYPNGLTETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA 197

Query: 762 I*SGIFSDLGSGSNVDICVITKGNKEYLRNYEMPNPRTFTSEKIYSFSKKTEILTAKV 589
           I SGIF+DLGSGSNVDICVITKGNKEYLRNY  PNPRT+ S K YSF+KKTE+L  K+
Sbjct: 198 ICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKI 255



 Score = 26.6 bits (57), Expect(2) = 4e-26
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 595 KGTPLRELVEVVEAGDAME 539
           K TPL E VE+ E G+AME
Sbjct: 254 KITPLLERVEITEVGEAME 272


>ref|XP_002887065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332906|gb|EFH63324.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  118 bits (295), Expect(2) = 4e-26
 Identities = 64/118 (54%), Positives = 72/118 (61%), Gaps = 35/118 (29%)
 Frame = -1

Query: 837 VLGGVDVTGPHLHT-----------------------------------RDDGVALVRGA 763
           VLGGVD+TGPHLHT                                   RD+G+ LV  A
Sbjct: 138 VLGGVDITGPHLHTIDPNGLTETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA 197

Query: 762 I*SGIFSDLGSGSNVDICVITKGNKEYLRNYEMPNPRTFTSEKIYSFSKKTEILTAKV 589
           I SGIF+DLGSGSNVDICVITKGNKEYLRNY  PNPRT+ S K YSF+KKTE+L  K+
Sbjct: 198 ICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKI 255



 Score = 26.6 bits (57), Expect(2) = 4e-26
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 595 KGTPLRELVEVVEAGDAME 539
           K TPL E VE+ E G+AME
Sbjct: 254 KITPLLERVEITEVGEAME 272


>ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
           lyrata] gi|297321225|gb|EFH51646.1| hypothetical protein
           ARALYDRAFT_904988 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  118 bits (295), Expect(2) = 4e-26
 Identities = 64/118 (54%), Positives = 72/118 (61%), Gaps = 35/118 (29%)
 Frame = -1

Query: 837 VLGGVDVTGPHLHT-----------------------------------RDDGVALVRGA 763
           VLGGVD+TGPHLHT                                   RD+G+ LV  A
Sbjct: 138 VLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA 197

Query: 762 I*SGIFSDLGSGSNVDICVITKGNKEYLRNYEMPNPRTFTSEKIYSFSKKTEILTAKV 589
           I SGIF+DLGSGSNVDICVITKGNKEYLRNY  PNPRT+ S K YSF+KKTE+L  K+
Sbjct: 198 ICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKI 255



 Score = 26.6 bits (57), Expect(2) = 4e-26
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 595 KGTPLRELVEVVEAGDAME 539
           K TPL E VE+ E G+AME
Sbjct: 254 KITPLLERVEITEVGEAME 272


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