BLASTX nr result

ID: Cnidium21_contig00009702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009702
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis t...   392   e-107
ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arab...   392   e-107
ref|XP_004159076.1| PREDICTED: proteasome subunit beta type-7-A-...   391   e-106
ref|NP_850641.1| proteasome subunit beta type-7-A [Arabidopsis t...   391   e-106
dbj|BAH56982.1| AT3G27430 [Arabidopsis thaliana]                      391   e-106

>ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
           gi|30693626|ref|NP_851108.1| proteasome subunit beta
           type-7-B [Arabidopsis thaliana]
           gi|82581524|sp|Q7DLS1.2|PSB7B_ARATH RecName:
           Full=Proteasome subunit beta type-7-B; AltName: Full=20S
           proteasome beta subunit B-2; AltName: Full=Proteasome
           component FC; AltName: Full=Proteasome subunit beta
           type-2; Flags: Precursor gi|3421104|gb|AAC32067.1| 20S
           proteasome beta subunit PBB2 [Arabidopsis thaliana]
           gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit
           PBB2 [Arabidopsis thaliana] gi|332007184|gb|AED94567.1|
           proteasome subunit beta type-7-B [Arabidopsis thaliana]
           gi|332007185|gb|AED94568.1| proteasome subunit beta
           type-7-B [Arabidopsis thaliana]
          Length = 274

 Score =  392 bits (1008), Expect = e-107
 Identities = 190/220 (86%), Positives = 206/220 (93%)
 Frame = -2

Query: 660 MSKVDVDVPAKGGFSFDLCRRNDMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 481
           MS+  VD+P KGGFSFDLC+RNDML +KGLK  SFLKTGTTIVGLIFKDGVILGADTRAT
Sbjct: 1   MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60

Query: 480 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTESVTDNISSQLKLHRYHTGRESRVVTALT 301
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTE+VTD +SSQL+LHRY TGR+SRVVTALT
Sbjct: 61  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALT 120

Query: 300 LLKSHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 121
           LLK HLFSYQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFE++
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAK 180

Query: 120 YVEGMNRDEGVALVRDAIRSGIFNDLGSGSNVDICVITKG 1
           Y EG+ RDEG+ LV +AI SGIFNDLGSGSNVDICVITKG
Sbjct: 181 YKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKG 220


>ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
           lyrata] gi|297321225|gb|EFH51646.1| hypothetical protein
           ARALYDRAFT_904988 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  392 bits (1006), Expect = e-107
 Identities = 190/220 (86%), Positives = 206/220 (93%)
 Frame = -2

Query: 660 MSKVDVDVPAKGGFSFDLCRRNDMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 481
           MS+  VDVP KGGFSFDLC+RNDML +KGLK  SFLKTGTTIVGLIFKDGVILGADTRAT
Sbjct: 1   MSQSAVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60

Query: 480 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTESVTDNISSQLKLHRYHTGRESRVVTALT 301
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTE+VTD +SSQL+LHRY TGR+SRV+TALT
Sbjct: 61  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALT 120

Query: 300 LLKSHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 121
           LLK HLFSYQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFE++
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAK 180

Query: 120 YVEGMNRDEGVALVRDAIRSGIFNDLGSGSNVDICVITKG 1
           Y EG+ RDEG+ LV +AI SGIFNDLGSGSNVDICVITKG
Sbjct: 181 YKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKG 220


>ref|XP_004159076.1| PREDICTED: proteasome subunit beta type-7-A-like [Cucumis sativus]
          Length = 273

 Score =  391 bits (1005), Expect = e-106
 Identities = 191/220 (86%), Positives = 205/220 (93%)
 Frame = -2

Query: 660 MSKVDVDVPAKGGFSFDLCRRNDMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 481
           MS   +DVP K GFSFDLCRRNDML KKGLK  S+LKTGTTIVGLIF+DGVILGADTRAT
Sbjct: 1   MSTSAIDVPPKSGFSFDLCRRNDMLAKKGLKSPSYLKTGTTIVGLIFQDGVILGADTRAT 60

Query: 480 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTESVTDNISSQLKLHRYHTGRESRVVTALT 301
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTE+VTD +SSQL+LHRYHTGRESRVVTALT
Sbjct: 61  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALT 120

Query: 300 LLKSHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 121
           LLK HLFSYQG+VSAALVLGGVDVTGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFES+
Sbjct: 121 LLKKHLFSYQGYVSAALVLGGVDVTGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESK 180

Query: 120 YVEGMNRDEGVALVRDAIRSGIFNDLGSGSNVDICVITKG 1
           Y EG+ RDEG+ LV +AI SGIFNDLGSGSNVD+CVITKG
Sbjct: 181 YKEGLTRDEGIRLVTEAICSGIFNDLGSGSNVDVCVITKG 220


>ref|NP_850641.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
           gi|332643797|gb|AEE77318.1| proteasome subunit beta
           type-7-A [Arabidopsis thaliana]
          Length = 267

 Score =  391 bits (1004), Expect = e-106
 Identities = 189/220 (85%), Positives = 206/220 (93%)
 Frame = -2

Query: 660 MSKVDVDVPAKGGFSFDLCRRNDMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 481
           MS+  VDVP KGGFSFDLC+RNDML +KGLK  SFLKTGTTIVGLIFKDGVILGADTRAT
Sbjct: 1   MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60

Query: 480 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTESVTDNISSQLKLHRYHTGRESRVVTALT 301
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTE+VTD +SSQL+LHRY TGR+SRV+TALT
Sbjct: 61  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALT 120

Query: 300 LLKSHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 121
           LLK HLFSYQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFE++
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAK 180

Query: 120 YVEGMNRDEGVALVRDAIRSGIFNDLGSGSNVDICVITKG 1
           Y EG+ RDEG+ LV ++I SGIFNDLGSGSNVDICVITKG
Sbjct: 181 YKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKG 220


>dbj|BAH56982.1| AT3G27430 [Arabidopsis thaliana]
          Length = 254

 Score =  391 bits (1004), Expect = e-106
 Identities = 189/220 (85%), Positives = 206/220 (93%)
 Frame = -2

Query: 660 MSKVDVDVPAKGGFSFDLCRRNDMLMKKGLKPSSFLKTGTTIVGLIFKDGVILGADTRAT 481
           MS+  VDVP KGGFSFDLC+RNDML +KGLK  SFLKTGTTIVGLIFKDGVILGADTRAT
Sbjct: 1   MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60

Query: 480 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTESVTDNISSQLKLHRYHTGRESRVVTALT 301
           EGPIVADKNCEKIHYMAPNIYCCGAGTAADTE+VTD +SSQL+LHRY TGR+SRV+TALT
Sbjct: 61  EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALT 120

Query: 300 LLKSHLFSYQGHVSAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMAVFESR 121
           LLK HLFSYQGHVSAALVLGGVD+TGPHLHTIYPHGSTD+LPFATMGSGSLAAM+VFE++
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAK 180

Query: 120 YVEGMNRDEGVALVRDAIRSGIFNDLGSGSNVDICVITKG 1
           Y EG+ RDEG+ LV ++I SGIFNDLGSGSNVDICVITKG
Sbjct: 181 YKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKG 220


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