BLASTX nr result

ID: Cnidium21_contig00009668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009668
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k...   125   3e-27
dbj|BAK01930.1| predicted protein [Hordeum vulgare subsp. vulgare]    113   2e-23
ref|XP_002886831.1| hypothetical protein ARALYDRAFT_893907 [Arab...   113   2e-23
dbj|BAE98525.1| hypothetical protein [Arabidopsis thaliana]           112   2e-23
ref|NP_564846.1| plastid transcriptionally active 4 [Arabidopsis...   112   2e-23

>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein,
           chloroplastic [Vitis vinifera]
           gi|297735245|emb|CBI17607.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/75 (80%), Positives = 71/75 (94%)
 Frame = +1

Query: 1   LNQLTTDDLEGQFALLETSSVDDDLASLKKELSGSTRKGQLPPGRTTAASNSGFPFRETE 180
           LNQLTTDDLEG+FALLE+SSVDDDLASLKKELSGS++KG+LPPGRT  ASN+ FPFR++E
Sbjct: 250 LNQLTTDDLEGKFALLESSSVDDDLASLKKELSGSSKKGELPPGRTAVASNTAFPFRDSE 309

Query: 181 IENELNELRRKAADY 225
           IE ELNELRRKA+++
Sbjct: 310 IEKELNELRRKASEF 324


>dbj|BAK01930.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 315

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/75 (72%), Positives = 64/75 (85%)
 Frame = +1

Query: 1   LNQLTTDDLEGQFALLETSSVDDDLASLKKELSGSTRKGQLPPGRTTAASNSGFPFRETE 180
           L QL  DDLEG+FA+LET+SVDDDLA ++KELSGS+ KG+LPPGRTT AS SG PFR+TE
Sbjct: 241 LGQLGADDLEGKFAMLETTSVDDDLAQMRKELSGSSLKGELPPGRTTTASKSGSPFRDTE 300

Query: 181 IENELNELRRKAADY 225
           IE ELNELR+K  +Y
Sbjct: 301 IETELNELRKKTKEY 315


>ref|XP_002886831.1| hypothetical protein ARALYDRAFT_893907 [Arabidopsis lyrata subsp.
           lyrata] gi|297332672|gb|EFH63090.1| hypothetical protein
           ARALYDRAFT_893907 [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/75 (69%), Positives = 69/75 (92%)
 Frame = +1

Query: 1   LNQLTTDDLEGQFALLETSSVDDDLASLKKELSGSTRKGQLPPGRTTAASNSGFPFRETE 180
           L Q+ TD+LEG+F +LETSSVDDDLA+LKKELSGS++KG+LPPGR+T A+++ +PF+++E
Sbjct: 255 LTQIGTDELEGKFQMLETSSVDDDLANLKKELSGSSKKGELPPGRSTVAASTRYPFKDSE 314

Query: 181 IENELNELRRKAADY 225
           IENELNELRRKA D+
Sbjct: 315 IENELNELRRKANDF 329


>dbj|BAE98525.1| hypothetical protein [Arabidopsis thaliana]
          Length = 170

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/75 (69%), Positives = 68/75 (90%)
 Frame = +1

Query: 1   LNQLTTDDLEGQFALLETSSVDDDLASLKKELSGSTRKGQLPPGRTTAASNSGFPFRETE 180
           L Q+ TD+LEG+F +LETSSVDDDLA LKKELSGS++KG+LPPGR+T A+++ +PF+++E
Sbjct: 96  LTQIGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGELPPGRSTVAASTRYPFKDSE 155

Query: 181 IENELNELRRKAADY 225
           IENELNELRRKA D+
Sbjct: 156 IENELNELRRKANDF 170


>ref|NP_564846.1| plastid transcriptionally active 4 [Arabidopsis thaliana]
           gi|44888073|sp|O80796.1|VIPP1_ARATH RecName:
           Full=Membrane-associated protein VIPP1, chloroplastic;
           AltName: Full=Protein VESICLE-INDUCING PROTEIN IN
           PLASTIDS 1; Flags: Precursor gi|3335333|gb|AAC27135.1|
           Similar to chloroplast membrane-associated 30KD protein
           precursor (IM30) gb|M73744 from Pisum sativum. ESTs
           gb|N37557, gb|W43887 and gb|AA042479 come from this gene
           [Arabidopsis thaliana] gi|15027977|gb|AAK76519.1|
           unknown protein [Arabidopsis thaliana]
           gi|21436055|gb|AAM51228.1| unknown protein [Arabidopsis
           thaliana] gi|332196228|gb|AEE34349.1| plastid
           transcriptionally active 4 [Arabidopsis thaliana]
          Length = 330

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/75 (69%), Positives = 68/75 (90%)
 Frame = +1

Query: 1   LNQLTTDDLEGQFALLETSSVDDDLASLKKELSGSTRKGQLPPGRTTAASNSGFPFRETE 180
           L Q+ TD+LEG+F +LETSSVDDDLA LKKELSGS++KG+LPPGR+T A+++ +PF+++E
Sbjct: 256 LTQIGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGELPPGRSTVAASTRYPFKDSE 315

Query: 181 IENELNELRRKAADY 225
           IENELNELRRKA D+
Sbjct: 316 IENELNELRRKANDF 330


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