BLASTX nr result
ID: Cnidium21_contig00009666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009666
(742 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS00039.1| splicing factor-like protein [Vitis riparia] 244 2e-62
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac... 243 2e-62
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera] 243 2e-62
ref|XP_002510842.1| arginine/serine-rich splicing factor, putati... 234 1e-59
ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2... 231 1e-58
>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 244 bits (622), Expect = 2e-62
Identities = 155/278 (55%), Positives = 168/278 (60%), Gaps = 32/278 (11%)
Frame = -1
Query: 742 KTLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFETQEDAIRALEATNMSKL 563
KTLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+E+QEDA RALEATNMSKL
Sbjct: 95 KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154
Query: 562 MDRVISVEYAIKDDDERKSGYSPXXXXXXXXXXXXXXRGISPSPYRRERGSPDYGHGRGR 383
MDRVISVEYA++DDDER++GYSP +G S SPYRRERGSPDY GRG
Sbjct: 155 MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDY--GRGS 212
Query: 382 SPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSPN-------GRDMKXXXXXXXXX 224
SPS YRRERASPDYGR S +P R R G SRSP+ D
Sbjct: 213 SPSAYRRERASPDYGRDPSPSPRRRDRAMPDHGRSRSPSHHRRERTSHDSARGPSRSPYR 272
Query: 223 XXXXXXXXSNYGRGCRSPIGREKKI--DYGRGGS-------PDGRERKA--DYGRGASPD 77
+YGRG GR +KI DY S GR KA DYGRGASP
Sbjct: 273 SERSDRAIPDYGRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPS 332
Query: 76 G--RER-KTDYGRGG----------SPDGRER-KADYG 5
RER +DY R SP RER K DYG
Sbjct: 333 SPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYG 370
Score = 70.9 bits (172), Expect = 3e-10
Identities = 58/147 (39%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Frame = -1
Query: 442 SPSPYRRERGSPDYGHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSPNG 263
S SP +RER PDYGH R S SP +RE+A+PD+GRG S + R+ Y RG S+SP
Sbjct: 356 SQSPRQRERTKPDYGHER--SVSPEQREKANPDHGRGPSRSSP---RREYDRGPSQSPQQ 410
Query: 262 RDMKXXXXXXXXXXXXXXXXXSNYGRG-CRSPIGREK-KIDYGRGGSPDGRERKAD---Y 98
+ +Y RG SP RE DY RG SP+ + + D Y
Sbjct: 411 GE----------------RALPDYARGPSDSPYQRESISPDYDRGPSPNSKREERDSPNY 454
Query: 97 GRGASP-DGRERKTDYGRGGSPDGRER 20
G ASP +GR R SP RER
Sbjct: 455 GGSASPMNGRYRSR------SPPARER 475
Score = 66.2 bits (160), Expect = 7e-09
Identities = 57/160 (35%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Frame = -1
Query: 448 GISPSPYRRERGSPDY------GHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKS--Y 293
G SPS RRER + DY R +S SP +RER PDYG S +P R + + +
Sbjct: 328 GASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDH 387
Query: 292 GRGDSRSPNGRDMKXXXXXXXXXXXXXXXXXSNYGRG-CRSPIGREKKI-DYGRGGSPDG 119
GRG SRS R+ Y RG +SP E+ + DY RG S
Sbjct: 388 GRGPSRSSPRRE---------------------YDRGPSQSPQQGERALPDYARGPSDSP 426
Query: 118 RERKA---DYGRGASPDGRERKTD---YGRGGSP-DGRER 20
+R++ DY RG SP+ + + D YG SP +GR R
Sbjct: 427 YQRESISPDYDRGPSPNSKREERDSPNYGGSASPMNGRYR 466
>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 480
Score = 243 bits (621), Expect = 2e-62
Identities = 155/278 (55%), Positives = 168/278 (60%), Gaps = 32/278 (11%)
Frame = -1
Query: 742 KTLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFETQEDAIRALEATNMSKL 563
KTLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+E+QEDA RALEATNMSKL
Sbjct: 97 KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 156
Query: 562 MDRVISVEYAIKDDDERKSGYSPXXXXXXXXXXXXXXRGISPSPYRRERGSPDYGHGRGR 383
MDRVISVEYA++DDDER++GYSP +G S SPYRRERGSPDY GRG
Sbjct: 157 MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDY--GRGS 214
Query: 382 SPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSPN-------GRDMKXXXXXXXXX 224
SPS YRRERASPDYGR S +P R R G SRSP+ D
Sbjct: 215 SPSAYRRERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYR 274
Query: 223 XXXXXXXXSNYGRGCRSPIGREKKI--DYGRGGS-------PDGRERKA--DYGRGASPD 77
+YGRG GR +KI DY S GR KA DYGRGASP
Sbjct: 275 SERSDRAIPDYGRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPS 334
Query: 76 G--RER-KTDYGRGG----------SPDGRER-KADYG 5
RER +DY R SP RER K DYG
Sbjct: 335 SPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYG 372
Score = 72.8 bits (177), Expect = 7e-11
Identities = 59/147 (40%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Frame = -1
Query: 442 SPSPYRRERGSPDYGHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSPNG 263
S SP +RER PDYGH R S SP +RE+A+PDYGRG S + R+ Y RG S+SP
Sbjct: 358 SQSPRQRERTKPDYGHER--SVSPEQREKANPDYGRGPSRSSP---RREYDRGPSQSPQQ 412
Query: 262 RDMKXXXXXXXXXXXXXXXXXSNYGRG-CRSPIGREK-KIDYGRGGSPDGRERKAD---Y 98
+ +Y RG SP RE DY RG SP+ + + D Y
Sbjct: 413 GE----------------RALPDYSRGPSDSPYQRESISPDYDRGPSPNSKREERDSPNY 456
Query: 97 GRGASP-DGRERKTDYGRGGSPDGRER 20
G ASP +GR R SP RER
Sbjct: 457 GGSASPMNGRYRSR------SPPARER 477
Score = 68.2 bits (165), Expect = 2e-09
Identities = 58/160 (36%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Frame = -1
Query: 448 GISPSPYRRERGSPDY------GHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKS--Y 293
G SPS RRER + DY R +S SP +RER PDYG S +P R + + Y
Sbjct: 330 GASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDY 389
Query: 292 GRGDSRSPNGRDMKXXXXXXXXXXXXXXXXXSNYGRG-CRSPIGREKKI-DYGRGGSPDG 119
GRG SRS R+ Y RG +SP E+ + DY RG S
Sbjct: 390 GRGPSRSSPRRE---------------------YDRGPSQSPQQGERALPDYSRGPSDSP 428
Query: 118 RERKA---DYGRGASPDGRERKTD---YGRGGSP-DGRER 20
+R++ DY RG SP+ + + D YG SP +GR R
Sbjct: 429 YQRESISPDYDRGPSPNSKREERDSPNYGGSASPMNGRYR 468
>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
Length = 479
Score = 243 bits (621), Expect = 2e-62
Identities = 155/278 (55%), Positives = 168/278 (60%), Gaps = 32/278 (11%)
Frame = -1
Query: 742 KTLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFETQEDAIRALEATNMSKL 563
KTLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+E+QEDA RALEATNMSKL
Sbjct: 95 KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154
Query: 562 MDRVISVEYAIKDDDERKSGYSPXXXXXXXXXXXXXXRGISPSPYRRERGSPDYGHGRGR 383
MDRVISVEYA++DDDER++GYSP +G S SPYRRERGSPDY GRG
Sbjct: 155 MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDY--GRGS 212
Query: 382 SPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSPN-------GRDMKXXXXXXXXX 224
SPS YRRERASPDYGR S +P R R G SRSP+ D
Sbjct: 213 SPSAYRRERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYR 272
Query: 223 XXXXXXXXSNYGRGCRSPIGREKKI--DYGRGGS-------PDGRERKA--DYGRGASPD 77
+YGRG GR +KI DY S GR KA DYGRGASP
Sbjct: 273 SERSDRAIPDYGRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPS 332
Query: 76 G--RER-KTDYGRGG----------SPDGRER-KADYG 5
RER +DY R SP RER K DYG
Sbjct: 333 SPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYG 370
Score = 73.6 bits (179), Expect = 4e-11
Identities = 60/147 (40%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Frame = -1
Query: 442 SPSPYRRERGSPDYGHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSPNG 263
S SP +RER PDYGH R S SP +RE+A+PDYGRG S S R+ Y RG S+SP
Sbjct: 356 SQSPRQRERTKPDYGHER--SVSPEQREKANPDYGRGPS--RSSPQRREYDRGPSQSPQQ 411
Query: 262 RDMKXXXXXXXXXXXXXXXXXSNYGRG-CRSPIGREK-KIDYGRGGSPDGRERKAD---Y 98
+ +Y RG SP RE DY RG SP+ + + D Y
Sbjct: 412 GE----------------RALPDYSRGPSDSPYQRESISPDYDRGPSPNSKREERDSPNY 455
Query: 97 GRGASP-DGRERKTDYGRGGSPDGRER 20
G ASP +GR R SP RER
Sbjct: 456 GGSASPMNGRYRSR------SPPARER 476
Score = 67.4 bits (163), Expect = 3e-09
Identities = 58/160 (36%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Frame = -1
Query: 448 GISPSPYRRERGSPDY------GHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKS--Y 293
G SPS RRER + DY R +S SP +RER PDYG S +P R + + Y
Sbjct: 328 GASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDY 387
Query: 292 GRGDSRSPNGRDMKXXXXXXXXXXXXXXXXXSNYGRG-CRSPIGREKKI-DYGRGGSPDG 119
GRG SRS R Y RG +SP E+ + DY RG S
Sbjct: 388 GRGPSRSSPQR--------------------REYDRGPSQSPQQGERALPDYSRGPSDSP 427
Query: 118 RERKA---DYGRGASPDGRERKTD---YGRGGSP-DGRER 20
+R++ DY RG SP+ + + D YG SP +GR R
Sbjct: 428 YQRESISPDYDRGPSPNSKREERDSPNYGGSASPMNGRYR 467
>ref|XP_002510842.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223549957|gb|EEF51444.1| arginine/serine-rich
splicing factor, putative [Ricinus communis]
Length = 331
Score = 234 bits (597), Expect = 1e-59
Identities = 143/251 (56%), Positives = 167/251 (66%), Gaps = 10/251 (3%)
Frame = -1
Query: 742 KTLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFETQEDAIRALEATNMSKL 563
KTLFVINFDP+HTRT+DLERHF+PYG+I+++RIRRNFAF+Q+E+Q+DA +ALEATNMSKL
Sbjct: 54 KTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYESQDDATKALEATNMSKL 113
Query: 562 MDRVISVEYAIKDDDERKSGYSPXXXXXXXXXXXXXXRGISPSPYRRERGSPDYGHGRGR 383
MDRVISVEYA++DDDER++GYSP R S SPYRRERGSPDY GRG
Sbjct: 114 MDRVISVEYAVRDDDERRNGYSPDRGRDRSPDRRSHDRKRSSSPYRRERGSPDY--GRGP 171
Query: 382 SPSPYRRERASPDYGRGGSGTPSGRVRKS--YGRGDSRSPNGRDMKXXXXXXXXXXXXXX 209
SP PYRRERASPDYGR S +P R R S YGR SRSP R+
Sbjct: 172 SPGPYRRERASPDYGRRRSPSPYKRDRASPDYGRASSRSPYRRE---------------- 215
Query: 208 XXXSNYGRG-CRSPIGREK-KIDYGRG--GSPDGRERKA-DYG--RGASPDGRER-KTDY 53
S++GRG RSP RE+ D GRG SP RE+ + D G R SP GRER D
Sbjct: 216 RPGSDHGRGSSRSPYHRERASPDNGRGHSASPYQREKASPDNGRDRSRSPYGRERTNPDN 275
Query: 52 GRGGSPDGRER 20
GRG S E+
Sbjct: 276 GRGSSRSPYEK 286
Score = 70.5 bits (171), Expect = 4e-10
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = -1
Query: 448 GISPSPYRRERGSPDYGHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKS--YGRGDSR 275
G S SPY RER SPD +GRG S SPY+RE+ASPD GR S +P GR R + GRG SR
Sbjct: 224 GSSRSPYHRERASPD--NGRGHSASPYQREKASPDNGRDRSRSPYGRERTNPDNGRGSSR 281
Query: 274 SPNGRDM 254
SP +D+
Sbjct: 282 SPYEKDV 288
Score = 58.2 bits (139), Expect = 2e-06
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = -1
Query: 448 GISPSPYRRERGSPDYGHGRGRSPSPYRRERASPDYGRGGSGTPSGRVRKSYGRGDSRSP 269
G S SPY+RE+ SPD +GR RS SPY RER +PD GRG S +P + S G SP
Sbjct: 242 GHSASPYQREKASPD--NGRDRSRSPYGRERTNPDNGRGSSRSPYEKDVNSPENGRRTSP 299
Query: 268 N 266
N
Sbjct: 300 N 300
>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
predicted protein [Populus trichocarpa]
Length = 343
Score = 231 bits (589), Expect = 1e-58
Identities = 135/241 (56%), Positives = 156/241 (64%), Gaps = 7/241 (2%)
Frame = -1
Query: 742 KTLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFETQEDAIRALEATNMSKL 563
KTLFVINFDP+HTRT+DLERHF+PYG+I+++RIRRNFAF+Q+E QEDA +AL+ATN+SKL
Sbjct: 95 KTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNLSKL 154
Query: 562 MDRVISVEYAIKDDDERKSGYSPXXXXXXXXXXXXXXRGISPSPYRRERGSPDYGHGRGR 383
+DRVISVEYA++DDDERK GYSP R SPSPYRRERGSPDYG G
Sbjct: 155 LDRVISVEYAVRDDDERKDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSPDYGRG--- 211
Query: 382 SPSPYRRERASPDYGRGGSGTPSGRVRKS--YGRGDSRSPNGRDMKXXXXXXXXXXXXXX 209
PSPYR+ER SPDYGR S +P R R S YGRG SRSP R+
Sbjct: 212 -PSPYRKERGSPDYGRRRSPSPYRRDRASPDYGRGTSRSPYRRE------------RAGK 258
Query: 208 XXXSNYGRG-CRSPIGREKKID-YGRGG--SPDGRER-KADYGRGASPDGRERKTDYGRG 44
GRG RSP RE+ +GRG SP GRER D GRG+S ER D
Sbjct: 259 RISPENGRGPSRSPYRRERSNQGHGRGSSHSPYGRERPNPDNGRGSSRSPTERDGDSPEN 318
Query: 43 G 41
G
Sbjct: 319 G 319