BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009643
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885130.1| F-box family protein [Arabidopsis lyrata sub...    62   3e-07
ref|XP_003615467.1| F-box protein [Medicago truncatula] gi|35551...    62   4e-07
ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref...    60   1e-06
ref|XP_003617917.1| F-box protein [Medicago truncatula] gi|35551...    59   3e-06
ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06...    59   4e-06

>ref|XP_002885130.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330970|gb|EFH61389.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 362

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
 Frame = -1

Query: 973 GLVC-SIYMHLFFLWNPVTGLCKTIIPPRHYWENNILLYGFGWDYVESEFKIVIYYQVDK 797
           G +C ++  H F +WNP +   K +  P  Y ++NIL  GFG+D V  ++K+V +     
Sbjct: 99  GTLCVTLKNHTFMVWNPFSKQFKIVPNPGIYQDSNIL--GFGYDPVHDDYKLVTFIDRLD 156

Query: 796 SFQGFVYTSNSDSWN---GLATPDIFSCTNVWQHPD---IIVDGCPYWYGYRGN-DRFEI 638
                V+   + SW     +A PD       W + D     +D   YW  YR N DRF I
Sbjct: 157 VSTAHVFEFRTGSWRESLRIAYPD-------WHYRDRRGTFLDQYLYWIAYRSNADRFII 209

Query: 637 KFETGSNQCKEFSLP 593
           +F   +++ ++F LP
Sbjct: 210 RFNISTHEYRKFPLP 224


>ref|XP_003615467.1| F-box protein [Medicago truncatula] gi|355516802|gb|AES98425.1|
           F-box protein [Medicago truncatula]
          Length = 278

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 15/248 (6%)
 Frame = -1

Query: 973 GLVCSIYMHLFFLWNPVTGLCKTIIPPRHYWENNILLYGFGWDYVESEFKIVIYYQVDKS 794
           G++C I   +   WNP     K I P +  +   I+ +GF +D+V  ++K++ Y  V + 
Sbjct: 35  GILCIISKTVVVFWNPAPEKVKVIPPSQLEFSYGIMDHGFDYDHVRDDYKLIQYVDVVEC 94

Query: 793 FQGF--VYTSNSDSWNGLATPDIFSCTNVWQHPDIIVDGCPYWYGYRGNDRFEI---KFE 629
                 +Y+  SDSW  +   DI     +    ++ ++G  +W G   ND ++I    F+
Sbjct: 95  HDPLWEIYSLKSDSWRKM---DIDMPIRI-NFDNVCLNGICHWLG-EANDNYDIVVVSFQ 149

Query: 628 TGSNQCKEFSLPSQIIGRYQYILVDLKDCLTMMVYSASAGTLVN-----VFHLD--EECG 470
            G+  C  F  P   +   +Y +    D + + V +     +VN      FH+    E G
Sbjct: 150 LGNEVC--FVTPLSFLEDMEYDI----DDVNLQVLNEPVAVIVNHIETKSFHISILGEIG 203

Query: 469 V---WSKTYTFGPIHCFFGKFSQCFKYSGEIVFNNAKMLYDSKTKGIKVISDAHSNFISG 299
           V   W + +  GP+ C         K +  +  ++  + +D  T  I+ I      F   
Sbjct: 204 VGESWFRLFDIGPLSCIMRPIIVWNKGNIVVGKDDQLVCFDLTTGVIEEIDVKAEQFCHI 263

Query: 298 FSYTPSLV 275
           F Y  +L+
Sbjct: 264 FIYKKNLL 271


>ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref|XP_003599642.1| F-box
           [Medicago truncatula] gi|355488679|gb|AES69882.1| F-box
           [Medicago truncatula] gi|355488690|gb|AES69893.1| F-box
           [Medicago truncatula]
          Length = 350

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 64/268 (23%), Positives = 106/268 (39%), Gaps = 9/268 (3%)
 Frame = -1

Query: 973 GLVCSIYMHLFFLWNPVTGLCKTIIPPRHYW---ENNILLYGFGWDYVESEFKIVI--YY 809
           G++C    +   LWNP         P +H     +N   LY  G+D     +KIV+  ++
Sbjct: 104 GVICFTLNNRLLLWNPSIRKFNMFPPLKHSGRGRQNPCSLYSIGYDRFSQTYKIVVVSFF 163

Query: 808 QVDKSFQGFVYTSNSDSWNGLATPDIFSCTNVWQHPDIIVDGCPYWYGYRGNDRFEIKFE 629
           + D + Q  VYT  +DSW  +      SC +   +P +   G   W          I  +
Sbjct: 164 KDDNTNQVHVYTLGTDSWKRIGDLPNSSCID---NPGVFASGTINWLAKDSRSSIVISLD 220

Query: 628 TGSNQCKEFSLPSQIIGRYQYILVDLKDCLTMMVYSASAGTLVNVFHLDEECG---VWSK 458
                 ++ S P+  +    + L  LKDCL++  Y+      V+V+ ++ ECG    W+K
Sbjct: 221 FEKESYQKLSHPN--VETNCWTLGVLKDCLSIFAYT---NMFVDVWIMN-ECGNNQPWTK 274

Query: 457 TYTFGPIHCFFGKFSQCFKYSGEIVFNNAKMLYDSKTKGIKVISDAHSNFISGFSYTPSL 278
            Y   P   + G    C              LY ++   + +    HS   +   Y  S 
Sbjct: 275 LYHV-PYMVYRGNRPYC------------TPLYITEDDQVLMYFHDHSTHTNLVVY-DSK 320

Query: 277 VFLHGMEPLHTQSHWRSPNVR-RSVLTP 197
           +  + M  L    HWR   V   S+++P
Sbjct: 321 IGTYNMPELQNIDHWRDSVVYVESLISP 348


>ref|XP_003617917.1| F-box protein [Medicago truncatula] gi|355519252|gb|AET00876.1|
           F-box protein [Medicago truncatula]
          Length = 394

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 25/234 (10%)
 Frame = -1

Query: 946 LFFLWNPVTGLCKTIIP-----PRHYWENNILLYGFGWDYVESEFKIVIYYQV------- 803
           +F +WNP T   K +IP     P  YW      + FG+D V+ ++K V Y +        
Sbjct: 148 MFIIWNPTTDEFK-VIPSSFEFPEFYWRPYTTHHLFGFDRVKKDYKFVQYVREVPHDQET 206

Query: 802 -DKSFQGFVYTSNSDSWNGLAT--PDIFSCTNVWQHPDIIVDGCPYWYGYRGNDRFEIKF 632
            D +F   +Y+ NS+SW  L    P  +          + +DG  +W G      + + F
Sbjct: 207 EDDNFFWEIYSLNSNSWKKLKVGIPHSYRIDE-----QVYMDGVSHWLGESRTRTYLVSF 261

Query: 631 ETGSNQCKEFSLPSQIIG--RYQYILVDLKDCLTMMVYSASAGTLVNVFHLD--EECGV- 467
           +  S  C +  +PS I    + +  LV L   +  ++    A    ++FH+    E G+ 
Sbjct: 262 DFSSESCIKLPIPSYINDNRKVERHLVILNGFIAFIL----AYKETSIFHISILGEIGIK 317

Query: 466 --WSKTYTFGPIHCFFGKFSQCFKYSGEIVF---NNAKMLYDSKTKGIKVISDA 320
             W+K +  GP+  F  ++       G+I+F   N+   L+D +T  I  I  A
Sbjct: 318 ESWTKLFIVGPLP-FQLEYPIGAGEKGKILFRRKNDKLALFDLRTGMIDEIGTA 370


>ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Vitis
           vinifera]
          Length = 360

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
 Frame = -1

Query: 973 GLVCSI-YMHLFFLWNPVTGLCKTIIPPRHYWENNILLYGFGWDYVESEFKIVIYYQVDK 797
           GL+C I   H   LWNP T     + P   + EN+ +LYGF +DY   ++KIV      +
Sbjct: 102 GLLCVIDSFHNPALWNPSTRQFNPL-PKPSFLENSDILYGFTYDYSSDDYKIVRVVSTSR 160

Query: 796 SF---QGFVYTSNSDSWNGLATPDIFSCTNVWQHPDIIVDGCPYWY------GYRGNDRF 644
                +  V+   ++ W      +       W      ++G  YW       G+ G  R 
Sbjct: 161 DVIKTEIDVFELKTNEWR--RVEETHYSRPAWD-VGTFLNGAFYWLAWRLSEGHEGFSRV 217

Query: 643 EIKFETGSNQCKEFSLPSQIIGRYQYILVDLKDCLTMMVYSASAGTLVNVFHLDEECG-- 470
            + F+    + KE  LPS +      I + +       +Y    G L  ++ ++E+ G  
Sbjct: 218 VVSFDLKEERFKEVELPSDV----GIINLRVFGGYLSAMYHDLYGELTKMWVMEEKAGKD 273

Query: 469 VWSKTYTF---------GPIHCFFGKFSQCFKYSGE--IVFNNAKM-LYDSKTKGIKVI 329
            W+   T          GP+ C+F  F    K  GE  +V N  K+ LYD KTK  K I
Sbjct: 274 SWANVATLPFRSENDSDGPLLCWFANF---LKNGGEFLLVINKWKLILYDFKTKTHKDI 329