BLASTX nr result

ID: Cnidium21_contig00009576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009576
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinife...   138   1e-30
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...   130   3e-28
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...   126   4e-27
ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like...   126   5e-27
ref|XP_004147407.1| PREDICTED: 60S ribosomal protein L18a-1-like...   124   2e-26

>emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinifera]
           gi|297740676|emb|CBI30858.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score =  138 bits (347), Expect = 1e-30
 Identities = 62/90 (68%), Positives = 70/90 (77%)
 Frame = -1

Query: 459 HGYQNVPGYVFPDGRPYLEHRLPCCGMGIGWFLFICGFLFGTIPWYIGACLLLFVQMDYR 280
           HGYQ VPGY   +GRP  E RLPCCG+GIGW LFI GF    IPWYIGA +LL V++DYR
Sbjct: 56  HGYQTVPGYAVVEGRPVRERRLPCCGIGIGWLLFIIGFFCAAIPWYIGAFILLCVRVDYR 115

Query: 279 EKPGLIVCMLASVLATIAIMLGVTKATNAW 190
           EKPGLI C +A+VLA IAI LGVTK T+AW
Sbjct: 116 EKPGLIACTIATVLAVIAITLGVTKGTHAW 145


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score =  130 bits (327), Expect = 3e-28
 Identities = 55/90 (61%), Positives = 67/90 (74%)
 Frame = -1

Query: 459 HGYQNVPGYVFPDGRPYLEHRLPCCGMGIGWFLFICGFLFGTIPWYIGACLLLFVQMDYR 280
           HGYQ VPGY   +GRP  E RLPCCG+G+GWFLFI GF  G IPWY+G  +LL  ++D R
Sbjct: 77  HGYQTVPGYAVAEGRPVRERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFILLCARIDPR 136

Query: 279 EKPGLIVCMLASVLATIAIMLGVTKATNAW 190
           EKPG + C +A+VLATIAI+LG TK  + W
Sbjct: 137 EKPGYVACTIAAVLATIAIVLGATKGADDW 166


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  126 bits (317), Expect = 4e-27
 Identities = 54/87 (62%), Positives = 65/87 (74%)
 Frame = -1

Query: 459 HGYQNVPGYVFPDGRPYLEHRLPCCGMGIGWFLFICGFLFGTIPWYIGACLLLFVQMDYR 280
           HGYQ VPGY   +G P  E RLPCCG+G+GWFLFI GF    +PWY+G  LLL  ++DYR
Sbjct: 55  HGYQAVPGYAVAEGTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYR 114

Query: 279 EKPGLIVCMLASVLATIAIMLGVTKAT 199
           EKPG I C +A++LATIAI+ GVTK T
Sbjct: 115 EKPGYIACTIAAILATIAIIFGVTKGT 141


>ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
           gi|449524020|ref|XP_004169021.1| PREDICTED: 60S
           ribosomal protein L18a-1-like [Cucumis sativus]
          Length = 153

 Score =  126 bits (316), Expect = 5e-27
 Identities = 52/90 (57%), Positives = 66/90 (73%)
 Frame = -1

Query: 459 HGYQNVPGYVFPDGRPYLEHRLPCCGMGIGWFLFICGFLFGTIPWYIGACLLLFVQMDYR 280
           HGYQ VPGY   +GRP  E RLPCCG+GIGWFLFI GF    IPWY GA L++  ++DYR
Sbjct: 64  HGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRVDYR 123

Query: 279 EKPGLIVCMLASVLATIAIMLGVTKATNAW 190
           EKPG + C +A+V+AT+AI+ G T+  + W
Sbjct: 124 EKPGYVACSIAAVIATVAIIFGATREADVW 153


>ref|XP_004147407.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
           gi|449516990|ref|XP_004165529.1| PREDICTED: 60S
           ribosomal protein L18a-1-like [Cucumis sativus]
          Length = 159

 Score =  124 bits (312), Expect = 2e-26
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = -1

Query: 456 GYQNVP--GYVFPDGRPYLEHRLPCCGMGIGWFLFICGFLFGTIPWYIGACLLLFVQMDY 283
           GYQ VP  GY   +GRP+ E RLPCCG+G+GWFLF+ GF  G IPWY+GA ++LFV++DY
Sbjct: 69  GYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDY 128

Query: 282 REKPGLIVCMLASVLATIAIMLGVTKATNAW 190
           REKPG + C +ASVLA IAI  G+T     W
Sbjct: 129 REKPGYVACAIASVLAVIAITFGITNGVEPW 159


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