BLASTX nr result
ID: Cnidium21_contig00009563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009563
(745 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thalia... 140 2e-48
gb|AFK42492.1| unknown [Lotus japonicus] 139 8e-48
ref|NP_186857.1| 40S ribosomal protein S19-1 [Arabidopsis thalia... 139 3e-47
ref|XP_002884301.1| 40S ribosomal protein S19 [Arabidopsis lyrat... 139 3e-47
ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Viti... 137 4e-47
>ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thaliana]
gi|297793669|ref|XP_002864719.1| 40S ribosomal protein
S19 [Arabidopsis lyrata subsp. lyrata]
gi|27923837|sp|Q9FNP8.1|RS193_ARATH RecName: Full=40S
ribosomal protein S19-3 gi|9759463|dbj|BAB10379.1| 40S
ribosomal protein S19 [Arabidopsis thaliana]
gi|34365671|gb|AAQ65147.1| At5g61170 [Arabidopsis
thaliana] gi|51970120|dbj|BAD43752.1| 40S ribosomal
protein S19 - like [Arabidopsis thaliana]
gi|297310554|gb|EFH40978.1| 40S ribosomal protein S19
[Arabidopsis lyrata subsp. lyrata]
gi|332010047|gb|AED97430.1| 40S ribosomal protein S19-3
[Arabidopsis thaliana]
Length = 143
Score = 140 bits (354), Expect(2) = 2e-48
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -3
Query: 431 GGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSG 252
GGLGVGAFRRIYGGSKRNGS PPHFCKSSGG+ARHILQQLQTMNIVD D+KGGRKITSSG
Sbjct: 69 GGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSG 128
Query: 251 QRDLDQVAGRI 219
QRDLDQVAGRI
Sbjct: 129 QRDLDQVAGRI 139
Score = 78.2 bits (191), Expect(2) = 2e-48
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -1
Query: 670 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTG 548
M G+TVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKTG
Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTG 41
>gb|AFK42492.1| unknown [Lotus japonicus]
Length = 144
Score = 139 bits (350), Expect(2) = 8e-48
Identities = 66/76 (86%), Positives = 73/76 (96%)
Frame = -3
Query: 431 GGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSG 252
GGLGVGAF+RIYGGS+RNGS PPHFCKSSG IARHILQQLQTM+I++ D+KGGRKITSSG
Sbjct: 69 GGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQTMHIIELDNKGGRKITSSG 128
Query: 251 QRDLDQVAGRIVVVAP 204
+RDLDQVAGRIVVVAP
Sbjct: 129 RRDLDQVAGRIVVVAP 144
Score = 77.8 bits (190), Expect(2) = 8e-48
Identities = 36/40 (90%), Positives = 36/40 (90%)
Frame = -1
Query: 670 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKT 551
M RTVKDVSPHEFVKAYAAHLKRSGKMELP WTDIVKT
Sbjct: 1 MSTARTVKDVSPHEFVKAYAAHLKRSGKMELPEWTDIVKT 40
>ref|NP_186857.1| 40S ribosomal protein S19-1 [Arabidopsis thaliana]
gi|27923843|sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S
ribosomal protein S19-1
gi|6513924|gb|AAF14828.1|AC011664_10 putative 40S
ribosomal protein S19 [Arabidopsis thaliana]
gi|13878029|gb|AAK44092.1|AF370277_1 putative 40S
ribosomal protein S19 [Arabidopsis thaliana]
gi|17104595|gb|AAL34186.1| putative 40S ribosomal
protein S19 [Arabidopsis thaliana]
gi|21593712|gb|AAM65679.1| putative 40S ribosomal
protein S19 [Arabidopsis thaliana]
gi|332640239|gb|AEE73760.1| 40S ribosomal protein S19-1
[Arabidopsis thaliana]
Length = 143
Score = 139 bits (349), Expect(2) = 3e-47
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = -3
Query: 431 GGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSG 252
GGLGVGAFRRIYGGSKRNGS PPHFCKSSGGIARHILQQL+TMNIV+ D+KGGR+ITSSG
Sbjct: 69 GGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSG 128
Query: 251 QRDLDQVAGRIVV 213
QRDLDQVAGRI V
Sbjct: 129 QRDLDQVAGRIAV 141
Score = 76.3 bits (186), Expect(2) = 3e-47
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = -1
Query: 670 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTG 548
M G+TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKTG
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTG 41
>ref|XP_002884301.1| 40S ribosomal protein S19 [Arabidopsis lyrata subsp. lyrata]
gi|297330141|gb|EFH60560.1| 40S ribosomal protein S19
[Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 139 bits (349), Expect(2) = 3e-47
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = -3
Query: 431 GGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSG 252
GGLGVGAFRRIYGGSKRNGS PPHFCKSSGGIARHILQQL+TMNIV+ D+KGGR+ITSSG
Sbjct: 68 GGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSG 127
Query: 251 QRDLDQVAGRIVV 213
QRDLDQVAGRI V
Sbjct: 128 QRDLDQVAGRIAV 140
Score = 76.3 bits (186), Expect(2) = 3e-47
Identities = 34/39 (87%), Positives = 38/39 (97%)
Frame = -1
Query: 664 AGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTG 548
AG+TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKTG
Sbjct: 2 AGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTG 40
>ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Vitis vinifera]
gi|147858266|emb|CAN83920.1| hypothetical protein
VITISV_028810 [Vitis vinifera]
gi|297733901|emb|CBI15148.3| unnamed protein product
[Vitis vinifera]
Length = 143
Score = 137 bits (346), Expect(2) = 4e-47
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -3
Query: 431 GGLGVGAFRRIYGGSKRNGSAPPHFCKSSGGIARHILQQLQTMNIVDFDSKGGRKITSSG 252
GG+GVGAFRRIYGGSKRNGS PPHFCKSSG IARHILQQLQTMNI++ DSKGGR+ITSSG
Sbjct: 69 GGIGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKGGRRITSSG 128
Query: 251 QRDLDQVAGRIVV 213
QRDLDQVAGRI V
Sbjct: 129 QRDLDQVAGRIAV 141
Score = 77.0 bits (188), Expect(2) = 4e-47
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -1
Query: 670 MEAGRTVKDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKT 551
M RTVKDVSPHEFV AYAAHLKRSGK+ELPHWTDIVKT
Sbjct: 1 MATARTVKDVSPHEFVNAYAAHLKRSGKIELPHWTDIVKT 40