BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009555
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabid...   629   e-178
ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arab...   626   e-177
ref|XP_002307125.1| predicted protein [Populus trichocarpa] gi|2...   625   e-177
ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...   622   e-176
ref|XP_004142985.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...   619   e-175

>ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
            gi|226711456|sp|O64862.2|CTU1_ARATH RecName:
            Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
            Full=Cytoplasmic tRNA adenylyltransferase 1
            gi|26449617|dbj|BAC41934.1| unknown protein [Arabidopsis
            thaliana] gi|30725380|gb|AAP37712.1| At2g44270
            [Arabidopsis thaliana] gi|330255305|gb|AEC10399.1|
            cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis
            thaliana]
          Length = 355

 Score =  629 bits (1622), Expect = e-178
 Identities = 304/344 (88%), Positives = 324/344 (94%), Gaps = 9/344 (2%)
 Frame = -2

Query: 1182 RNCCICNQTKAALKRPKTLQQICRECFYQVFEEEIHRVIVDNRLFNPGERIAIGASGGKD 1003
            R CC+CN  +  LKRPKTLQQICRECFY+VFEEEIH+VIV NRLF  GER+AIGASGGKD
Sbjct: 12   RLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVAIGASGGKD 71

Query: 1002 STVLAYVMAELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVVSYKDL 823
            STVLAYV++ELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGLPLK+VSYKDL
Sbjct: 72   STVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPLKIVSYKDL 131

Query: 822  YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVVTGHNADDIAETVILNILR 643
            YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKV+K+VTGHNADDIAETV+LNILR
Sbjct: 132  YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILR 191

Query: 642  GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGF 463
            GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGF
Sbjct: 192  GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGF 251

Query: 462  AREFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCERCGYISSQKWCKACVLLEG 283
            AREFIKDLERIRPRAILDIIKSGEDFRIAT+TKMPEQGTCERCGYISSQKWCKACVLLEG
Sbjct: 252  AREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEG 311

Query: 282  LNRGLPKLGIGR-RGIDNERNSK--------KSIENKQCGSLDF 178
            LNRGLPK+GIGR RG++ + N +        KSIE+KQCGSLDF
Sbjct: 312  LNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 355


>ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
            lyrata] gi|297327794|gb|EFH58214.1| hypothetical protein
            ARALYDRAFT_483552 [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score =  626 bits (1615), Expect = e-177
 Identities = 303/344 (88%), Positives = 323/344 (93%), Gaps = 9/344 (2%)
 Frame = -2

Query: 1182 RNCCICNQTKAALKRPKTLQQICRECFYQVFEEEIHRVIVDNRLFNPGERIAIGASGGKD 1003
            R CC+CN  +  LKRPKTLQQICRECFY+VFEEEIH+VIV NRLF  GER+AIGASGGKD
Sbjct: 12   RLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVAIGASGGKD 71

Query: 1002 STVLAYVMAELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVVSYKDL 823
            STVLAYV++ELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGLPL++VSYKDL
Sbjct: 72   STVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPLQIVSYKDL 131

Query: 822  YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVVTGHNADDIAETVILNILR 643
            YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDK+VTGHNADDIAETV+LNILR
Sbjct: 132  YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILR 191

Query: 642  GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGF 463
            GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGF
Sbjct: 192  GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGF 251

Query: 462  AREFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCERCGYISSQKWCKACVLLEG 283
            AREFIKDLERIRPRAILDIIKSGEDFRIAT+TKMPEQGTCERCGYISSQKWCKACVLLEG
Sbjct: 252  AREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEG 311

Query: 282  LNRGLPKLGIGR-RGIDNERNSK--------KSIENKQCGSLDF 178
            LNRGLPK+GIGR RG++ +   +        KSIE+KQCGSLDF
Sbjct: 312  LNRGLPKMGIGRPRGVNGDHKMETKKPGSVAKSIESKQCGSLDF 355


>ref|XP_002307125.1| predicted protein [Populus trichocarpa] gi|222856574|gb|EEE94121.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  625 bits (1613), Expect = e-177
 Identities = 306/344 (88%), Positives = 326/344 (94%), Gaps = 9/344 (2%)
 Frame = -2

Query: 1182 RNCCICNQTKAALKRPKTLQQICRECFYQVFEEEIHRVIVDNRLFNPGERIAIGASGGKD 1003
            R C +CNQ +AALKRPKTL+QICRECFY+VFEEEIH+VIV N+LF PGERIAIGASGGKD
Sbjct: 11   RLCYLCNQRRAALKRPKTLEQICRECFYEVFEEEIHQVIVKNQLFKPGERIAIGASGGKD 70

Query: 1002 STVLAYVMAELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVVSYKDL 823
            STVLAYV++ELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLK+VSYKDL
Sbjct: 71   STVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDL 130

Query: 822  YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVVTGHNADDIAETVILNILR 643
            YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDK+VTGHNADDIAETV+LNILR
Sbjct: 131  YGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILR 190

Query: 642  GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRG 466
            GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEI++ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 191  GDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIMLTYAYFKRLDYFSTECIYSPNAYRG 250

Query: 465  FAREFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCERCGYISSQKWCKACVLLE 286
            FAREFIKDLER+RPRAILDIIKSGEDFRI+TSTKMPEQGTCERCGYISSQKWCKACVLLE
Sbjct: 251  FAREFIKDLERMRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 310

Query: 285  GLNRGLPKLGIGR-RGIDN-------ERNSKKSIENKQCGSLDF 178
            GLN+GLPKLGIGR RG+DN       + N  K+IE KQCGSLDF
Sbjct: 311  GLNKGLPKLGIGRSRGLDNNHRKDVKQSNGTKNIEGKQCGSLDF 354


>ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
            [Vitis vinifera]
          Length = 356

 Score =  622 bits (1604), Expect = e-176
 Identities = 305/348 (87%), Positives = 326/348 (93%), Gaps = 8/348 (2%)
 Frame = -2

Query: 1197 KPGRVRNCCICNQTKAALKRPKTLQQICRECFYQVFEEEIHRVIVDNRLFNPGERIAIGA 1018
            K G V+ C IC+Q +AALKRPKTL+QICRECFY VFEEEIHRV+VDN+LF PGERIAIGA
Sbjct: 10   KAGPVQ-CSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKPGERIAIGA 68

Query: 1017 SGGKDSTVLAYVMAELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVV 838
            SGGKDSTVLAYV++ELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVV
Sbjct: 69   SGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVV 128

Query: 837  SYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVVTGHNADDIAETVI 658
            SYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDK+ TGHNADDIAETV+
Sbjct: 129  SYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNADDIAETVL 188

Query: 657  LNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPN 478
            LNILRGDIARLSRCTSI TGEDGPIPRCKPFKYTYEKEIVMYAYFK+LDYFSTECIYSPN
Sbjct: 189  LNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFSTECIYSPN 248

Query: 477  AYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCERCGYISSQKWCKAC 298
            AYRGFAREFIKDLERIRPRAILDII+SGE FRI+TS KMPEQGTCERCGYISSQKWCKAC
Sbjct: 249  AYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYISSQKWCKAC 308

Query: 297  VLLEGLNRGLPKLGIGR-RGIDN-------ERNSKKSIENKQCGSLDF 178
            VLLEGLNRGLPKLGIGR RG++N       + N  K+I++KQCG+LDF
Sbjct: 309  VLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGTLDF 356


>ref|XP_004142985.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
            sativus] gi|449529421|ref|XP_004171698.1| PREDICTED:
            cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
            sativus]
          Length = 359

 Score =  619 bits (1596), Expect = e-175
 Identities = 302/344 (87%), Positives = 323/344 (93%), Gaps = 11/344 (3%)
 Frame = -2

Query: 1176 CCICNQTKAALKRPKTLQQICRECFYQVFEEEIHRVIVDNRLFNPGERIAIGASGGKDST 997
            CC+CN  KAALKRPKTLQQICRECFY+VFEEEIH+VIV N+LF PGERIA+GASGGKDST
Sbjct: 16   CCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGERIAVGASGGKDST 75

Query: 996  VLAYVMAELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVVSYKDLYG 817
            VLAYV++ELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPL++VSYKDLYG
Sbjct: 76   VLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYG 135

Query: 816  WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVVTGHNADDIAETVILNILRGD 637
            WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDK+ TGHNADD+AETV+LNILRGD
Sbjct: 136  WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGD 195

Query: 636  IARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGFA 460
            IARLSRCT+I TGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYFSTECIYSPNAYRGFA
Sbjct: 196  IARLSRCTAIITGEDGPIPRCKPFKYTYEKEIMFTYAYFKKLDYFSTECIYSPNAYRGFA 255

Query: 459  REFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCERCGYISSQKWCKACVLLEGL 280
            REFIKDLERIRPRAILDIIKSGEDFRI+TSTKMPEQGTCERCGYISSQKWCKACVLLEGL
Sbjct: 256  REFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315

Query: 279  NRGLPKLGIGR-RGIDNERNSK---------KSIENKQCGSLDF 178
            NRGLPKLGIGR RG+D+E   +         +SIE+KQCGSLDF
Sbjct: 316  NRGLPKLGIGRSRGLDSEGKRETIGSNNVHTRSIESKQCGSLDF 359