BLASTX nr result

ID: Cnidium21_contig00009543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009543
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517904.1| conserved hypothetical protein [Ricinus comm...   296   7e-78
ref|XP_002330640.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|XP_002329377.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_002274226.1| PREDICTED: uncharacterized protein LOC100248...   284   3e-74
emb|CAN65796.1| hypothetical protein VITISV_006560 [Vitis vinifera]   281   2e-73

>ref|XP_002517904.1| conserved hypothetical protein [Ricinus communis]
           gi|223542886|gb|EEF44422.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 292

 Score =  296 bits (757), Expect = 7e-78
 Identities = 149/281 (53%), Positives = 196/281 (69%), Gaps = 2/281 (0%)
 Frame = -3

Query: 870 MIFGFFEEGVEXXXXXXXXXXXXXXXXGYVFEEMEDDNDVDSCSAEKNKVFWESQDQLVQ 691
           ++FGF EE  E                    + +EDD D  S S E+N+ FWE+Q++L+Q
Sbjct: 27  IVFGFLEEQEESPKSSCDSN-----------DYLEDDEDDSSSSVEENRKFWETQEELLQ 75

Query: 690 MTLRKSSSAESKIRKTTKETIRDIKLGGTTCVCRKPVA-DCRNCLQKEISLRLETAKYNC 514
            TL ++SS E KIR+ TK+ +R+IK  G  C C +P    CRN LQ+EISLRL+   YNC
Sbjct: 76  ATLYRTSSLEMKIRQATKDAVREIKQLGLRCPCHEPATGQCRNFLQREISLRLQAEGYNC 135

Query: 513 AICKSKWMSTREIPSGDHTYLEVIDNSNISKGEIRVVIELNFRAEFEMARAGEDYCKLTN 334
           AICKSKW S+ +IPSG+HT+LEV++  N  KGE+RVVIELNFR EFEMARA ++Y +L N
Sbjct: 136 AICKSKWKSSHDIPSGEHTFLEVVEKLNSKKGEVRVVIELNFRGEFEMARASQEYNQLIN 195

Query: 333 RLPEVFVGKIERLRAVVKILCCASKKCMKERKMHIAPWRKQKYMQAKWIGVREMNAATAT 154
           RLPE+FVGK ERL+A++K+LC A+KKCMKE+KMH+ PWRK KYMQ+KW+G  E   +   
Sbjct: 196 RLPEMFVGKAERLKALLKVLCSAAKKCMKEKKMHLGPWRKHKYMQSKWLGTCERTTSAMD 255

Query: 153 VLPSGGRFEEWSRP-RQRASMLSFDLLEASPALHCQAIKVL 34
            LP G  F +  RP + RASML++D+L+  P LHC A+KVL
Sbjct: 256 PLPVG--FSD--RPTKPRASMLTYDMLQNLPVLHCTAVKVL 292


>ref|XP_002330640.1| predicted protein [Populus trichocarpa] gi|222872244|gb|EEF09375.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  294 bits (753), Expect = 2e-77
 Identities = 143/246 (58%), Positives = 190/246 (77%), Gaps = 1/246 (0%)
 Frame = -3

Query: 768 EDDNDVDSCSAEKNKVFWESQDQLVQMTLRKSSSAESKIRKTTKETIRDIKLGGTTCVCR 589
           ED++++  C+ E+NK FW+ Q+QL+Q TL ++SS E+KIR+ TK+T+++I + G  C+C 
Sbjct: 56  EDEDEISPCNVEENKKFWDEQNQLLQATLYRTSSLEAKIRQATKDTLKEIDVVGMHCLCG 115

Query: 588 KPVA-DCRNCLQKEISLRLETAKYNCAICKSKWMSTREIPSGDHTYLEVIDNSNISKGEI 412
           K VA DCR+CLQ+EIS+RL+   YNCAICKSKW  + EIPSG+HT+LEV+   +  KGE+
Sbjct: 116 KLVAGDCRDCLQREISIRLQNEGYNCAICKSKWKRSEEIPSGEHTFLEVVGKLSSKKGEV 175

Query: 411 RVVIELNFRAEFEMARAGEDYCKLTNRLPEVFVGKIERLRAVVKILCCASKKCMKERKMH 232
           RVVIELNFRAEFEMA+A ++Y +L +RLPEVFVGK ERL A++KILC A+KKCMKE+KMH
Sbjct: 176 RVVIELNFRAEFEMAKANQEYNQLISRLPEVFVGKAERLTALIKILCSAAKKCMKEKKMH 235

Query: 231 IAPWRKQKYMQAKWIGVREMNAATATVLPSGGRFEEWSRPRQRASMLSFDLLEASPALHC 52
           + PWRK KYMQ+KWI   E    T   LP GG  +  ++P  RASML++DLLE  P LHC
Sbjct: 236 LGPWRKHKYMQSKWIATCE--RTTPAPLP-GGFSDRTAKP--RASMLTYDLLETLPVLHC 290

Query: 51  QAIKVL 34
            A++VL
Sbjct: 291 TAVEVL 296


>ref|XP_002329377.1| predicted protein [Populus trichocarpa] gi|222870427|gb|EEF07558.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  285 bits (729), Expect = 1e-74
 Identities = 141/249 (56%), Positives = 184/249 (73%), Gaps = 1/249 (0%)
 Frame = -3

Query: 777 EEMEDDNDVDSCSAEKNKVFWESQDQLVQMTLRKSSSAESKIRKTTKETIRDIKLGGTTC 598
           E+  DD+++  C+ E+N  FWE+Q QL+Q TL ++SS E+KIR+ TKE +++I   G  C
Sbjct: 54  EDDGDDDEISPCNVEENNKFWETQLQLLQGTLYRTSSLETKIRQATKEAMKEIDGVGMYC 113

Query: 597 VCRKPVAD-CRNCLQKEISLRLETAKYNCAICKSKWMSTREIPSGDHTYLEVIDNSNISK 421
           +C KP+   CRNCLQ+EIS+RL+   YNCAIC+SKW  + EIPSG+HT+LEV+D  N  K
Sbjct: 114 LCGKPMPGACRNCLQREISIRLQNQGYNCAICESKWKRSEEIPSGEHTFLEVVDKLNSKK 173

Query: 420 GEIRVVIELNFRAEFEMARAGEDYCKLTNRLPEVFVGKIERLRAVVKILCCASKKCMKER 241
           GE RVVIELNFRAEFEMA+A ++Y +L NRLPEV+VGK ERL+A++KILC A+K+CMKE+
Sbjct: 174 GEARVVIELNFRAEFEMAKANQEYKQLINRLPEVYVGKTERLKALIKILCSAAKECMKEK 233

Query: 240 KMHIAPWRKQKYMQAKWIGVREMNAATATVLPSGGRFEEWSRPRQRASMLSFDLLEASPA 61
           KMH+ PWRK KYMQ+KW G  E     A   P G  F +   P+ RASML+ DL EA P 
Sbjct: 234 KMHLGPWRKLKYMQSKWAGTCE-RTTPAPYFPGG--FSD-RPPKSRASMLTCDLSEALPV 289

Query: 60  LHCQAIKVL 34
            HC A++VL
Sbjct: 290 WHCTAVQVL 298


>ref|XP_002274226.1| PREDICTED: uncharacterized protein LOC100248895 [Vitis vinifera]
           gi|302143301|emb|CBI21862.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score =  284 bits (726), Expect = 3e-74
 Identities = 160/302 (52%), Positives = 204/302 (67%), Gaps = 6/302 (1%)
 Frame = -3

Query: 921 SNCTLKNYSGDQQSPGVMIFGFFEEGVEXXXXXXXXXXXXXXXXGYVFEEMED--DNDVD 748
           S+ TLK +SGD +S G M+FGF  E                       E+  D  D +  
Sbjct: 15  SDDTLK-FSGDSESLGDMVFGFLGEDSSGSSCNSGGGWVHG-------EDCGDGADGEEG 66

Query: 747 SCSAEKNKVFWESQDQLVQMTLRKSSSAESKIRKTTKETIRDIKLGGTTCVCRKPVAD-C 571
             + E +K FWE QDQLVQ  L ++SS ESKIR+ TKE +R++KL  T CVCR+ VA  C
Sbjct: 67  FDNVEGSKAFWEEQDQLVQAILCRTSSIESKIRQVTKEALRELKLKETYCVCRRRVAGVC 126

Query: 570 RNCLQKEISLRLETAKYNCAICKSKWMSTREIPSGDHTYLEVIDNSNISKGEIRVVIELN 391
           +NC +KE+  +L+TA YN AICKSKW S+ +IPSG+H+Y+EV+D S+  KGE+RVVIELN
Sbjct: 127 QNCAEKEVWGQLQTAGYNSAICKSKWKSSPDIPSGEHSYMEVVDRSSAKKGEVRVVIELN 186

Query: 390 FRAEFEMARAGEDYCKLTNRLPEVFVGKIERLRAVVKILCCASKKCMKERKMHIAPWRKQ 211
           FRAEFEMARA  +Y  L +RLPEVFVGK ERL+A++KILC A+KKCMKE+KMH+ PWRK 
Sbjct: 187 FRAEFEMARASAEYNLLVSRLPEVFVGKSERLKALIKILCHAAKKCMKEKKMHMGPWRKH 246

Query: 210 KYMQAKWIGVREMNA-ATATVLPSGGRFEEWSRPRQRASMLSFDLLEASPA--LHCQAIK 40
           KYMQAKW G  E  A A  + +   GR      PRQR SML+FDLLE  PA  L+ +A++
Sbjct: 247 KYMQAKWFGTCERTAPAPMSPVDFPGRL-----PRQRVSMLTFDLLENLPAAGLNFKAVE 301

Query: 39  VL 34
           V+
Sbjct: 302 VV 303


>emb|CAN65796.1| hypothetical protein VITISV_006560 [Vitis vinifera]
          Length = 303

 Score =  281 bits (718), Expect = 2e-73
 Identities = 159/302 (52%), Positives = 202/302 (66%), Gaps = 6/302 (1%)
 Frame = -3

Query: 921 SNCTLKNYSGDQQSPGVMIFGFFEEGVEXXXXXXXXXXXXXXXXGYVFEEMED--DNDVD 748
           S+ TLK +SGD +S G M+FGF  E                       E+  D  D +  
Sbjct: 15  SDDTLK-FSGDSESLGDMVFGFLGEDSSGSSCNSGGGWVHG-------EDCGDGADGEEG 66

Query: 747 SCSAEKNKVFWESQDQLVQMTLRKSSSAESKIRKTTKETIRDIKLGGTTCVCRKPVAD-C 571
             + E +K FWE QDQLVQ  L ++SS ESKIR+ TKE +R++KL  T CVCR+ VA  C
Sbjct: 67  FDNVEGSKAFWEEQDQLVQAILCRTSSIESKIRQVTKEALRELKLKETYCVCRRRVAGVC 126

Query: 570 RNCLQKEISLRLETAKYNCAICKSKWMSTREIPSGDHTYLEVIDNSNISKGEIRVVIELN 391
           +NC +KE+  +L+TA YN AICKSKW S+ +IPSG H+Y+EV+D S+  KGE+RVVIELN
Sbjct: 127 QNCAEKEVWGQLQTAGYNSAICKSKWKSSPDIPSGKHSYMEVVDRSSAKKGEVRVVIELN 186

Query: 390 FRAEFEMARAGEDYCKLTNRLPEVFVGKIERLRAVVKILCCASKKCMKERKMHIAPWRKQ 211
           FRAEFEMARA  +Y  L +RLPEVF GK ERL+A++KILC A+KKCMKE+KMH+ PWRK 
Sbjct: 187 FRAEFEMARASAEYNLLVSRLPEVFXGKSERLKALIKILCHAAKKCMKEKKMHMGPWRKH 246

Query: 210 KYMQAKWIGVREMNA-ATATVLPSGGRFEEWSRPRQRASMLSFDLLEASPA--LHCQAIK 40
           KYMQAKW G  E  A A  + +   GR      PRQR SML+FDLLE  PA  L+ +A++
Sbjct: 247 KYMQAKWFGTCERTAPAPMSPVDFPGRL-----PRQRVSMLTFDLLENLPAAGLNFKAVE 301

Query: 39  VL 34
           V+
Sbjct: 302 VV 303


Top