BLASTX nr result
ID: Cnidium21_contig00009511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009511
(980 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 171 3e-40
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 158 2e-36
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein... 158 2e-36
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 157 5e-36
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein... 156 6e-36
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 171 bits (432), Expect = 3e-40
Identities = 104/231 (45%), Positives = 131/231 (56%), Gaps = 2/231 (0%)
Frame = -3
Query: 978 KIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAEENRRKAXXXXXXXXXX 799
KIETHVGYCKHLLEAAKVH EAAERE+ + + R ELARQV LAEE RRKA
Sbjct: 844 KIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQLER 903
Query: 798 XXXXXXXXXXXXXXXXXERMKEQWKHTSA-SKRKDRTHAEDXXXXXXXXXXXXXXXXXXX 622
ER+KEQWK + SKRK+R+ +D
Sbjct: 904 RKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKRRKK 963
Query: 621 XXXXXXXXXXXXXXXXXXXXXXEY-VNRNYKHTDNAMNDDGDEFEENPQDLLAAAGLEDS 445
+ N N++ + N MN+ D+ E++ QDLLAAAGLEDS
Sbjct: 964 DKSRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAAAGLEDS 1023
Query: 444 DAEADTVENPSATNRKRRAWSESEDDEPIMRQPESSPMRENSAEMQVSDGD 292
DAE D + PS+ NR++RAWSES++DEP ++PESSP+RENSAE+Q SDG+
Sbjct: 1024 DAE-DDMAGPSSGNRRKRAWSESDEDEPQDQRPESSPVRENSAEVQESDGE 1073
>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
CTR9 homolog [Cucumis sativus]
Length = 1050
Score = 158 bits (399), Expect = 2e-36
Identities = 95/234 (40%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Frame = -3
Query: 978 KIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAEENRRKAXXXXXXXXXX 799
KI+THVGYCKHLLEAA VHL+AAE E+Q+I++RQELARQV LAE+ RRKA
Sbjct: 817 KIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLER 876
Query: 798 XXXXXXXXXXXXXXXXXERMKEQWKHTSASKRKDRTHAEDXXXXXXXXXXXXXXXXXXXX 619
+R+KEQWK + +KR++R+ +D
Sbjct: 877 RKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRRKKD 936
Query: 618 XXXXXXXXXXXXXXXXXXXXXEY---VNRNYKHTDNAMNDDGDEFEENPQDLLAAAGLED 448
Y N +Y+ + + +ND GD+FE N QD LA AGLED
Sbjct: 937 RKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEAGLED 996
Query: 447 SDAEADTVENPSATNRKRRAWSESEDDEPIMRQPESSPMRENSAEMQVSDGD*R 286
SDAE + S R+R WS+SE+DEPI Q ES RENSA ++ SDG+ R
Sbjct: 997 SDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR 1050
>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
sativus]
Length = 1074
Score = 158 bits (399), Expect = 2e-36
Identities = 95/234 (40%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Frame = -3
Query: 978 KIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAEENRRKAXXXXXXXXXX 799
KI+THVGYCKHLLEAA VHL+AAE E+Q+I++RQELARQV LAE+ RRKA
Sbjct: 841 KIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLER 900
Query: 798 XXXXXXXXXXXXXXXXXERMKEQWKHTSASKRKDRTHAEDXXXXXXXXXXXXXXXXXXXX 619
+R+KEQWK + +KR++R+ +D
Sbjct: 901 RKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRRKKD 960
Query: 618 XXXXXXXXXXXXXXXXXXXXXEY---VNRNYKHTDNAMNDDGDEFEENPQDLLAAAGLED 448
Y N +Y+ + + +ND GD+FE N QD LA AGLED
Sbjct: 961 RKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEAGLED 1020
Query: 447 SDAEADTVENPSATNRKRRAWSESEDDEPIMRQPESSPMRENSAEMQVSDGD*R 286
SDAE + S R+R WS+SE+DEPI Q ES RENSA ++ SDG+ R
Sbjct: 1021 SDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR 1074
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 157 bits (396), Expect = 5e-36
Identities = 100/233 (42%), Positives = 128/233 (54%), Gaps = 2/233 (0%)
Frame = -3
Query: 978 KIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAEENRRKAXXXXXXXXXX 799
KI+THVGYC HLL AAKVHLEAAE E+Q++++RQELARQV LAEE RRKA
Sbjct: 843 KIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQMER 902
Query: 798 XXXXXXXXXXXXXXXXXERMKEQWKHTSASKRKDRTHAED-XXXXXXXXXXXXXXXXXXX 622
R+KEQWK +S SKR++R+ E+
Sbjct: 903 RKQEDELKRVQKQEEHFRRVKEQWKSSSHSKRRERSDDEEGGTGEKKRKKGGKRRKKDKH 962
Query: 621 XXXXXXXXXXXXXXXXXXXXXXEYVNRNYK-HTDNAMNDDGDEFEENPQDLLAAAGLEDS 445
E + NY+ MNDD EEN Q LLAAAGLEDS
Sbjct: 963 SKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDA---EENAQGLLAAAGLEDS 1019
Query: 444 DAEADTVENPSATNRKRRAWSESEDDEPIMRQPESSPMRENSAEMQVSDGD*R 286
DA+ +T S+ R+R+A SES+DDEP++ Q +SSP+R+NSA+MQ+SDG+ R
Sbjct: 1020 DADEETAAPSSSIARRRQALSESDDDEPLL-QRQSSPVRQNSADMQLSDGEIR 1071
>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1086
Score = 156 bits (395), Expect = 6e-36
Identities = 95/231 (41%), Positives = 123/231 (53%)
Frame = -3
Query: 978 KIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAEENRRKAXXXXXXXXXX 799
KI+THVGYC HLL AAKVHLEAAERE+Q++++RQELARQV AEE RRKA
Sbjct: 840 KIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQMER 899
Query: 798 XXXXXXXXXXXXXXXXXERMKEQWKHTSASKRKDRTHAEDXXXXXXXXXXXXXXXXXXXX 619
R+KEQWK +S SKR++R+ E+
Sbjct: 900 RKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRERSDDEEGGGTGEKKRKKGGKRRKKDK 959
Query: 618 XXXXXXXXXXXXXXXXXXXXXEYVNRNYKHTDNAMNDDGDEFEENPQDLLAAAGLEDSDA 439
E + + + D+ EEN Q LLAAAGLEDSDA
Sbjct: 960 HSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDSDA 1019
Query: 438 EADTVENPSATNRKRRAWSESEDDEPIMRQPESSPMRENSAEMQVSDGD*R 286
+ + S+ R+R+A SES+DDEP++ Q +SSP RENSA+MQ+SDG+ R
Sbjct: 1020 DEEAPAPSSSIARRRQALSESDDDEPLI-QRQSSPARENSADMQLSDGEIR 1069