BLASTX nr result

ID: Cnidium21_contig00009495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009495
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090395.1| orf142 (mitochondrion) [Phoenix dactylifera]...   120   9e-26
ref|YP_398413.1| orf173 [Triticum aestivum] gi|78675253|dbj|BAE4...   105   4e-21
gb|AAD34889.1| unknown [Oryza sativa]                                 103   1e-20
ref|YP_514677.1| hypothetical protein OrsaiPp50 [Oryza sativa In...   103   1e-20
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    62   1e-19

>ref|YP_005090395.1| orf142 (mitochondrion) [Phoenix dactylifera]
           gi|343478447|gb|AEM43935.1| orf142 (mitochondrion)
           [Phoenix dactylifera]
          Length = 141

 Score =  120 bits (302), Expect = 9e-26
 Identities = 76/126 (60%), Positives = 82/126 (65%), Gaps = 3/126 (2%)
 Frame = -2

Query: 369 NQTLNEID-SLFLKKREIG*DSWMDLSFIHIYYSKKGFI*LSSVARSPKSLIWPGKTALL 193
           NQTLNEI+   FL   +I  D W+ LS IHIY+           ARSPKSLIWPG  ALL
Sbjct: 11  NQTLNEIEIDSFL---DIRIDGWIYLS-IHIYF-----------ARSPKSLIWPGNKALL 55

Query: 192 WAQEAKGMSSAASPPNFFSVPVSHALR--APLAPCSPLILHWTVRMDFAVLSQHKLKRLY 19
           WAQEAKGMSSAASPP+FF  P    +R          L LHWTVRMDFAVLSQ K K LY
Sbjct: 56  WAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHWTVRMDFAVLSQRKWKGLY 115

Query: 18  HIEMSI 1
           HIEMSI
Sbjct: 116 HIEMSI 121


>ref|YP_398413.1| orf173 [Triticum aestivum] gi|78675253|dbj|BAE47678.1| orf173
           [Triticum aestivum]
          Length = 173

 Score =  105 bits (262), Expect = 4e-21
 Identities = 68/120 (56%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
 Frame = -2

Query: 345 SLFLKKREIG*DSWMDLSFIHIYYSKKGFI*LS---SVARSPKSLIWPGKTALLWAQEAK 175
           SL  +  EI  DS++D+          G+I LS   S A SPKSLIWPG  ALLWAQEAK
Sbjct: 9   SLNQRFHEIEIDSFLDIWI-------DGWIYLSIQISFAISPKSLIWPGNKALLWAQEAK 61

Query: 174 GMSSAASPPNFFSVPVSHALR--APLAPCSPLILHWTVRMDFAVLSQHKLKRLYHIEMSI 1
           GMSSAASPP+FF  P    +R          L LHW VRMDFAVLSQ K K LYHIEMSI
Sbjct: 62  GMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHWRVRMDFAVLSQRKWKGLYHIEMSI 121


>gb|AAD34889.1| unknown [Oryza sativa]
          Length = 166

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/84 (67%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 SVARSPKSLIWPGKTALLWAQEAKGMSSAASPPNFFSVPVSHALR--APLAPCSPLILHW 73
           S A SPKSLIWPG  ALLWAQEAKGMSSAASPP+FF  P    +R          L LHW
Sbjct: 38  SFAISPKSLIWPGNKALLWAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHW 97

Query: 72  TVRMDFAVLSQHKLKRLYHIEMSI 1
            VRMDFAVLSQ K K LYHIEMSI
Sbjct: 98  RVRMDFAVLSQRKWKGLYHIEMSI 121


>ref|YP_514677.1| hypothetical protein OrsaiPp50 [Oryza sativa Indica Group]
           gi|194033260|ref|YP_002000597.1| hypothetical protein
           OrsajM_p53 [Oryza sativa Japonica Group]
           gi|289065050|ref|YP_003433861.1| hypothetical protein
           OrrupM_p24 [Oryza rufipogon] gi|23495421|dbj|BAC19901.1|
           hypothetical protein [Oryza sativa Japonica Group]
           gi|56784287|dbj|BAD81969.1| Mitchondrion orf173 [Oryza
           sativa Japonica Group] gi|74100110|gb|AAZ99274.1|
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] gi|74100165|gb|AAZ99328.1| hypothetical
           protein (mitochondrion) [Oryza sativa Japonica Group]
           gi|74100219|gb|AAZ99381.1| hypothetical protein
           (mitochondrion) [Oryza sativa Japonica Group]
           gi|285026132|dbj|BAI67965.1| hypothetical protein [Oryza
           rufipogon] gi|285026182|dbj|BAI68014.1| hypothetical
           protein [Oryza sativa Indica Group]
           gi|285026195|dbj|BAI68027.1| hypothetical protein [Oryza
           sativa Indica Group] gi|353685247|gb|AER13010.1|
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] gi|353685248|gb|AER13011.1| hypothetical
           protein (mitochondrion) [Oryza sativa Indica Group]
           gi|353685319|gb|AER13081.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|353685320|gb|AER13082.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277602|gb|AEZ03708.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277704|gb|AEZ03809.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 173

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/84 (67%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 SVARSPKSLIWPGKTALLWAQEAKGMSSAASPPNFFSVPVSHALR--APLAPCSPLILHW 73
           S A SPKSLIWPG  ALLWAQEAKGMSSAASPP+FF  P    +R          L LHW
Sbjct: 38  SFAISPKSLIWPGNKALLWAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHW 97

Query: 72  TVRMDFAVLSQHKLKRLYHIEMSI 1
            VRMDFAVLSQ K K LYHIEMSI
Sbjct: 98  RVRMDFAVLSQRKWKGLYHIEMSI 121


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 61.6 bits (148), Expect(2) = 1e-19
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 144 SLEEKQPSSFPSLPGPKAAQSFLAKSRIWGF 236
           S+E+KQPSSFPSLPGPKA QSFLAKSRIWG+
Sbjct: 853 SVEDKQPSSFPSLPGPKAVQSFLAKSRIWGY 883



 Score = 59.3 bits (142), Expect(2) = 1e-19
 Identities = 28/48 (58%), Positives = 29/48 (60%)
 Frame = +1

Query: 1   NRHLDVIQPFQFMLGKNGEVHPNRPXXXXXXXXXXXXXXXXXXGHGEK 144
           NRHLDVIQPF F+LGKNGEVHPNRP                  GHGEK
Sbjct: 803 NRHLDVIQPFLFLLGKNGEVHPNRPMKNKRRAKRQWRAKRMRKGHGEK 850


Top