BLASTX nr result

ID: Cnidium21_contig00009456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009456
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...    91   2e-16
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...    91   2e-16
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...    90   5e-16
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...    90   5e-16

>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = +3

Query: 3    LMRFHTMKMEEINKILWELWKQTYKFQDIDYISIHYDAEGAGTRSYSYK 149
            LMRFHTMKMEEINKI+ ELW+QTY+ QDIDYISIH D+EGAGTRSYSYK
Sbjct: 1147 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYK 1195


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1256

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = +3

Query: 3    LMRFHTMKMEEINKILWELWKQTYKFQDIDYISIHYDAEGAGTRSYSYK 149
            LMRFHTMKMEEINKI+ ELW+QTY+ QDIDYISIH D+EGAGTRSYSYK
Sbjct: 1134 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYK 1182


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = +3

Query: 3    LMRFHTMKMEEINKILWELWKQTYKFQDIDYISIHYDAEGAGTRSYSYK 149
            LMRFHTMKMEEINKI+ ELW+QTY+ QDIDYISIH D+EGAGTRSYSYK
Sbjct: 1147 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYK 1195


>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = +3

Query: 3    LMRFHTMKMEEINKILWELWKQTYKFQDIDYISIHYDAEGAGTRSYSYK 149
            LMRFHTMKMEEINKI+ ELW+QTY+ QDIDYISIH D+EGAGTRSYSY+
Sbjct: 919  LMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYR 967


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = +3

Query: 3    LMRFHTMKMEEINKILWELWKQTYKFQDIDYISIHYDAEGAGTRSYSYK 149
            LMRFHTMKMEEINKI+ ELW+QTY+ QDIDYISIH D+EGAGTRSYSY+
Sbjct: 1147 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYR 1195


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