BLASTX nr result

ID: Cnidium21_contig00009433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009433
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042742.1| Os01g0278600 [Oryza sativa Japonica Group] g...    81   1e-13
gb|EEC70404.1| hypothetical protein OsI_01393 [Oryza sativa Indi...    77   1e-12
gb|EAZ01665.1| hypothetical protein OsI_23700 [Oryza sativa Indi...    62   6e-08
ref|NP_001174902.1| Os06g0613800 [Oryza sativa Japonica Group] g...    60   2e-07
ref|XP_003578171.1| PREDICTED: uncharacterized protein LOC100828...    58   9e-07

>ref|NP_001042742.1| Os01g0278600 [Oryza sativa Japonica Group]
           gi|56783742|dbj|BAD81154.1| unknown protein [Oryza
           sativa Japonica Group] gi|113532273|dbj|BAF04656.1|
           Os01g0278600 [Oryza sativa Japonica Group]
           gi|215697805|dbj|BAG91998.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618196|gb|EEE54328.1| hypothetical protein
           OsJ_01298 [Oryza sativa Japonica Group]
          Length = 470

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/129 (40%), Positives = 79/129 (61%)
 Frame = +3

Query: 90  GCYKNKDWTPIIMKIAPSVVSVSIFIGVQRKVDCTGLVIRWDDSTSRGTVLVCAKLLRIP 269
           G  K++    + + ++ S+VS+S F G +R   C+G VIRW+DSTS GT+L  A L+R P
Sbjct: 122 GSAKSQVARKVALGVSQSIVSLSSFAGRKRIRVCSGFVIRWNDSTSIGTILTSAALVRPP 181

Query: 270 ENEDRDDYYIVVRLPNGNILLAEEQYVDYCHNIMTLEVTSDAKLKPVDVDIPSPEIEEGI 449
                DD  + V LP+G+I + +   VD+ HNI  +EVTS+ KL+  +  I    I++G 
Sbjct: 182 CG---DDVRVEVFLPSGDISICQISMVDFHHNIALVEVTSNFKLQ--EAVILKYIIDKG- 235

Query: 450 DVVALSRDF 476
           DV+AL R +
Sbjct: 236 DVLALGRSY 244


>gb|EEC70404.1| hypothetical protein OsI_01393 [Oryza sativa Indica Group]
          Length = 653

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/105 (41%), Positives = 66/105 (62%)
 Frame = +3

Query: 90  GCYKNKDWTPIIMKIAPSVVSVSIFIGVQRKVDCTGLVIRWDDSTSRGTVLVCAKLLRIP 269
           G  K++    + + ++ S+VS+S F G +R   C+G VIRW+DSTS GT+L  A L+R P
Sbjct: 123 GSAKSQVARKVALGVSQSIVSLSSFAGRKRIRVCSGFVIRWNDSTSIGTILTSAALVRPP 182

Query: 270 ENEDRDDYYIVVRLPNGNILLAEEQYVDYCHNIMTLEVTSDAKLK 404
                DD  + V LP+G+I + +   VD+ HNI  +EVTS+ KL+
Sbjct: 183 CG---DDVRVEVFLPSGDISICQISMVDFHHNIALVEVTSNFKLQ 224


>gb|EAZ01665.1| hypothetical protein OsI_23700 [Oryza sativa Indica Group]
          Length = 700

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
 Frame = +3

Query: 75  RKWLSGCYKNK--------DWTPIIMKIA----PSVVSVSIFIGVQRKVDCTGLVIRWDD 218
           R W   C KN          W  +  K+A     SVVS++ F G +R   CTG+ I ++ 
Sbjct: 440 RFWGGMCLKNTFEEEFAEDTWCKLSKKVALNTSQSVVSLASFKGEERFFACTGVFIDFNG 499

Query: 219 STSRGTVLVCAKLLRI--PENEDRDDYYIVVRLPNGNILLAEEQYVDYCHNIMTLEVTSD 392
           STSR  V+  A L+RI   EN+  D+  I V LPN  I + E Q+ +  +NI  + V   
Sbjct: 500 STSR--VVTLASLVRISADENKIADNLKIKVYLPNKRIAVGELQHCNLSYNIAVVNVKGF 557

Query: 393 AKLKPVDVDIPSPEIEEGIDVVALSRDFYTCSLV 494
             L+  ++D    +IE   +VVA+ R F +  L+
Sbjct: 558 CCLRTAELD-KQMQIEPHREVVAIGRIFESGKLM 590


>ref|NP_001174902.1| Os06g0613800 [Oryza sativa Japonica Group]
           gi|255677228|dbj|BAH93630.1| Os06g0613800 [Oryza sativa
           Japonica Group]
          Length = 499

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
 Frame = +3

Query: 111 WTPIIMKIA----PSVVSVSIFIGVQRKVDCTGLVIRWDDSTSRGTVLVCAKLLRI--PE 272
           W  +  K+A     SVVS++ F G +R   CTG+ I ++ STSR  V+  A L+RI   E
Sbjct: 300 WCKLSKKVALNTSQSVVSLASFKGEERFFACTGVFIDFNGSTSR--VVTSASLVRISADE 357

Query: 273 NEDRDDYYIVVRLPNGNILLAEEQYVDYCHNIMTLEVTSDAKLKPVDVDIPSPEIEEGID 452
           N+  D+  I V LPN  I + E Q+ +  +NI  + V     L+  ++D    +IE   +
Sbjct: 358 NKIADNLKIKVYLPNKRIAVGELQHCNLSYNIAVVSVKGFCCLRTAELD-KQMQIEPHRE 416

Query: 453 VVALSRDFYTCSLV 494
           VVA+ R F +  L+
Sbjct: 417 VVAIGRIFESGKLM 430


>ref|XP_003578171.1| PREDICTED: uncharacterized protein LOC100828337 [Brachypodium
           distachyon]
          Length = 597

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = +3

Query: 120 IIMKIAPSVVSVSIFIGVQRKVDCTGLVIRWDDSTSRGTVLVCAKLLRIPENEDR--DDY 293
           +   ++ SVVS++ F G +R   CTG+VI ++  TS   VL  A L+R  E+E+R  D+ 
Sbjct: 359 VASNLSRSVVSLASFSGKRRLFACTGIVIEYNLCTS---VLTSASLVRSSEDENRIDDNL 415

Query: 294 YIVVRLPNGNILLAEEQYVDYCHNIMTLEVTSDAKLKPVDVDIPSPEIEEGIDVVALSRD 473
            I VRLPN   ++ + Q+    +NI  + + +   L    ++    + E G +VVA+ R 
Sbjct: 416 RIEVRLPNKQYVIGKLQHCSLHYNIALVNIVASPYLHAASLN-HQVQFESGSEVVAVGRI 474

Query: 474 F 476
           F
Sbjct: 475 F 475


Top