BLASTX nr result

ID: Cnidium21_contig00009396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009396
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806...    72   4e-12
ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793...    69   4e-11
ref|XP_003607265.1| Fasciclin-like arabinogalactan protein [Medi...    67   7e-11
ref|XP_002306324.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-11
ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medi...    67   3e-10

>ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806312 [Glycine max]
          Length = 444

 Score = 72.4 bits (176), Expect(2) = 4e-12
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
 Frame = -3

Query: 374 EKIPVGTELPTFEQGQSLLVTVA--GETITPIRIIYARIKVPCVIRN-----PSVYLPFQ 216
           EK+PVGT LPT E+GQSLL+T +  GET+ P+RI Y R+KV  VIRN      SVYLPF 
Sbjct: 315 EKLPVGTALPTLERGQSLLITTSGRGETLAPMRINYVRVKVADVIRNVKIVVHSVYLPFP 374

Query: 215 HLHNTIASAISS 180
           H+ N +A+A  S
Sbjct: 375 HI-NPVAAAYDS 385



 Score = 24.3 bits (51), Expect(2) = 4e-12
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 424 SVRFHIVPNRLLPI 383
           +VRFHIVPN  L I
Sbjct: 298 NVRFHIVPNHYLSI 311


>ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793476 [Glycine max]
          Length = 440

 Score = 68.9 bits (167), Expect(2) = 4e-11
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
 Frame = -3

Query: 374 EKIPVGTELPTFEQGQSLLVTVA--GETITPIRIIYARIKVPCVIRN-----PSVYLPFQ 216
           EK+PVG  LPT E+GQSLL+T +  GET+ P+RI Y R++V  VIRN      SVYLPF 
Sbjct: 315 EKLPVGIALPTLERGQSLLITTSGGGETLAPMRINYVRVRVSDVIRNVKIVVHSVYLPFP 374

Query: 215 HLHNTIASAISS 180
           H+ N +A+A  S
Sbjct: 375 HI-NPVAAAYDS 385



 Score = 24.3 bits (51), Expect(2) = 4e-11
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 424 SVRFHIVPNRLLPI 383
           +VRFHIVPN  L I
Sbjct: 298 NVRFHIVPNHYLSI 311


>ref|XP_003607265.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355508320|gb|AES89462.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 454

 Score = 66.6 bits (161), Expect(2) = 7e-11
 Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 7/69 (10%)
 Frame = -3

Query: 374 EKIPVGTELPTFEQGQSLLVTVA--GETITPIRIIYARIKVPCVIRN-----PSVYLPFQ 216
           EK+PVGT LPT E+GQ LL+T +  G T+ P+RI Y R+KV  VIRN      SVYLPF 
Sbjct: 309 EKLPVGTALPTLERGQPLLITTSGGGVTLAPMRINYVRVKVADVIRNVKIVVHSVYLPFP 368

Query: 215 HLHNTIASA 189
           H+ N IA A
Sbjct: 369 HI-NPIADA 376



 Score = 25.8 bits (55), Expect(2) = 7e-11
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -1

Query: 424 SVRFHIVPNRLLPI 383
           +VRFHI+PNR L I
Sbjct: 292 NVRFHIIPNRYLSI 305


>ref|XP_002306324.1| predicted protein [Populus trichocarpa] gi|222855773|gb|EEE93320.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 67.8 bits (164), Expect(2) = 9e-11
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
 Frame = -3

Query: 389 SNFGFEKIPVGTELPTFEQGQSLLVTVAG-----ETITPIRIIYARIKVPCVIRN----- 240
           S    E++PVG  LPT E+GQ+L+VT AG      T  P+RI Y R+KVP V+RN     
Sbjct: 309 STADLERLPVGATLPTLERGQALVVTSAGGLTGFNTAVPMRINYVRVKVPDVMRNLKIVV 368

Query: 239 PSVYLPFQHLHNTIASAISSYGVPEYNNNESCAANEGAVKNLF 111
            +VYLPF  +H T A+A               AA +GA   +F
Sbjct: 369 HAVYLPFPRIHPTSAAAFDEMMGIGGEGQNIVAAEDGACSAVF 411



 Score = 24.3 bits (51), Expect(2) = 9e-11
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 424 SVRFHIVPNRLL 389
           SVRFHIVPN  L
Sbjct: 297 SVRFHIVPNHYL 308


>ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355524091|gb|AET04545.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 448

 Score = 66.6 bits (161), Expect(2) = 3e-10
 Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 7/69 (10%)
 Frame = -3

Query: 374 EKIPVGTELPTFEQGQSLLVTVAGETIT--PIRIIYARIKVPCVIRN-----PSVYLPFQ 216
           EK+PVGT LPT E+GQ LL+T +G  +T  P+RI Y R+KV  VIRN      SVYLPF 
Sbjct: 309 EKLPVGTALPTLERGQPLLITTSGGGVTSAPMRINYVRVKVADVIRNVKIVVHSVYLPFP 368

Query: 215 HLHNTIASA 189
           H+ N IA+A
Sbjct: 369 HI-NPIAAA 376



 Score = 23.9 bits (50), Expect(2) = 3e-10
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 424 SVRFHIVPNRLLPI 383
           +VRFHI+PN  L I
Sbjct: 292 NVRFHIIPNHYLSI 305


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