BLASTX nr result

ID: Cnidium21_contig00009370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009370
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata] gi...   210   1e-52
ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arab...   210   1e-52
gb|ABW74568.1| Mpt5 [Boechera divaricarpa]                            210   1e-52
gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]           210   1e-52
ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana] gi|75217073|sp...   210   1e-52

>ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata] gi|297325042|gb|EFH55462.1|
            mpt5-3 [Arabidopsis lyrata subsp. lyrata]
          Length = 973

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/116 (90%), Positives = 110/116 (94%)
 Frame = +3

Query: 3    STIIQELAGKIVQMSQQKFASNVVEKCLAFGDPSQRELLVREMLGTTDENEPLQAMMKDQ 182
            + II+ELAGKIVQMSQQKFASNVVEKCL FG P +RELLV EMLGTTDENEPLQAMMKDQ
Sbjct: 847  TVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQ 906

Query: 183  FANYVVQKVLETCSDQERELILTRIKIHLNALKKYTYGKHIVARVEKLVAAGERRM 350
            FANYVVQKVLETC DQ+RELILTRIK+HLNALKKYTYGKHIVARVEKLVAAGERRM
Sbjct: 907  FANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 962


>ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
           lyrata] gi|297308854|gb|EFH39308.1| hypothetical protein
           ARALYDRAFT_920647 [Arabidopsis lyrata subsp. lyrata]
          Length = 503

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/116 (90%), Positives = 110/116 (94%)
 Frame = +3

Query: 3   STIIQELAGKIVQMSQQKFASNVVEKCLAFGDPSQRELLVREMLGTTDENEPLQAMMKDQ 182
           + II+ELAGKIVQMSQQKFASNVVEKCL FG P +RELLV EMLGTTDENEPLQAMMKDQ
Sbjct: 377 TVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQ 436

Query: 183 FANYVVQKVLETCSDQERELILTRIKIHLNALKKYTYGKHIVARVEKLVAAGERRM 350
           FANYVVQKVLETC DQ+RELILTRIK+HLNALKKYTYGKHIVARVEKLVAAGERRM
Sbjct: 437 FANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 492


>gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
          Length = 970

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/116 (90%), Positives = 110/116 (94%)
 Frame = +3

Query: 3    STIIQELAGKIVQMSQQKFASNVVEKCLAFGDPSQRELLVREMLGTTDENEPLQAMMKDQ 182
            + II+ELAGKIVQMSQQKFASNVVEKCL FG P +RELLV EMLGTTDENEPLQAMMKDQ
Sbjct: 844  TVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQ 903

Query: 183  FANYVVQKVLETCSDQERELILTRIKIHLNALKKYTYGKHIVARVEKLVAAGERRM 350
            FANYVVQKVLETC DQ+RELILTRIK+HLNALKKYTYGKHIVARVEKLVAAGERRM
Sbjct: 904  FANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 959


>gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
          Length = 975

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/116 (90%), Positives = 110/116 (94%)
 Frame = +3

Query: 3    STIIQELAGKIVQMSQQKFASNVVEKCLAFGDPSQRELLVREMLGTTDENEPLQAMMKDQ 182
            + II+ELAGKIVQMSQQKFASNVVEKCL FG P +RELLV EMLGTTDENEPLQAMMKDQ
Sbjct: 849  TVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQ 908

Query: 183  FANYVVQKVLETCSDQERELILTRIKIHLNALKKYTYGKHIVARVEKLVAAGERRM 350
            FANYVVQKVLETC DQ+RELILTRIK+HLNALKKYTYGKHIVARVEKLVAAGERRM
Sbjct: 909  FANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 964


>ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana] gi|75217073|sp|Q9ZW02.1|PUM3_ARATH
            RecName: Full=Pumilio homolog 3; Short=APUM-3;
            Short=AtPUM3 gi|3980417|gb|AAC95220.1| putative
            pumilio/Mpt5 family RNA-binding protein [Arabidopsis
            thaliana] gi|330253122|gb|AEC08216.1| pumilio 3
            [Arabidopsis thaliana]
          Length = 964

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/116 (90%), Positives = 110/116 (94%)
 Frame = +3

Query: 3    STIIQELAGKIVQMSQQKFASNVVEKCLAFGDPSQRELLVREMLGTTDENEPLQAMMKDQ 182
            + II+ELAGKIVQMSQQKFASNVVEKCL FG P +RELLV EMLGTTDENEPLQAMMKDQ
Sbjct: 838  TVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQ 897

Query: 183  FANYVVQKVLETCSDQERELILTRIKIHLNALKKYTYGKHIVARVEKLVAAGERRM 350
            FANYVVQKVLETC DQ+RELILTRIK+HLNALKKYTYGKHIVARVEKLVAAGERRM
Sbjct: 898  FANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 953


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