BLASTX nr result
ID: Cnidium21_contig00009358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009358
(1784 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g... 473 e-131
ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g... 472 e-130
emb|CBI35182.3| unnamed protein product [Vitis vinifera] 468 e-129
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [... 468 e-129
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ... 468 e-129
>ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 529
Score = 473 bits (1217), Expect = e-131
Identities = 252/434 (58%), Positives = 298/434 (68%), Gaps = 14/434 (3%)
Frame = +1
Query: 436 PEVHESGNDQKSDSAVNDSE-KKWPGWPGENVFRLLVPVQKVGSIIGRKGEYIKKTCEET 612
PE +S Q+S+ +E KKWPGWPGENVFR+LVPVQKVGSIIGRKGE+IKK EET
Sbjct: 96 PEDFDSLLKQESEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEET 155
Query: 613 KARIKVLDGPPGTTERTVMISAKELPDVAIPPAVDGLLKVHKRIXXXXXXXXXXXXXXXX 792
KARIK+LDGPPG +ER VM+SAKE PD IPPA+DGLL+VHK++
Sbjct: 156 KARIKILDGPPGISERAVMVSAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGR 215
Query: 793 XXCTRMLVAATQGGSLIGKQGATIKSIQDASNCIIRVLGRENLPVFALPDDXXXXXXXXX 972
TR+LVA TQ GSLIGKQG+TIKSIQD S C IRVLG ENLPVFAL DD
Sbjct: 216 SVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGES 275
Query: 973 XXXHKAIELIANHLRKFLVDRSVIGIFEMQMQSPNTHGNQDAPPPQSWG--PQGFSMNTG 1146
HKA+ELIA HLRKFLVDRS++G+FE QMQ P+ NQ+ PP Q+WG PQGF G
Sbjct: 276 AGVHKAVELIAVHLRKFLVDRSIVGVFETQMQRPDVRVNQNVPPHQNWGPPPQGFPAPAG 335
Query: 1147 GGHG---FAPNHQYAPPPRQFDNYYPPADMPPIEKQPRSG-PPAYGRDMTMGT-QPNMQP 1311
GG G FAPNHQY PP +D+YYPP ++PP++K G PPAY +D +MG + P
Sbjct: 336 GGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYAKDASMGIHSSSAPP 395
Query: 1312 HQSMVTKVSRNMQIPLTYADAVIGTSGANISYIRRASGATIAIQETRGVPDEMTVEINGS 1491
QS+VTKV+++MQIPLTYADAVIG SG NISYIRRASGA+I IQETRGVP EMTVEI+G+
Sbjct: 396 QQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGT 455
Query: 1492 ASEVQTAQQLIQNSI-XXXXXXXXXXXXXXXXXYNPYPNHGAAYLPHQQDG----AGHAP 1656
+S++Q AQQL+QN + Y+ YP Y P G GHAP
Sbjct: 456 SSQIQAAQQLVQNFMAEAASATQDPMGGSVSQGYSAYPTTAPVYAPPTSAGGGGHTGHAP 515
Query: 1657 AGDYGSVYG-NYGY 1695
+ DYG +YG NYGY
Sbjct: 516 SADYGPLYGTNYGY 529
>ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 528
Score = 472 bits (1215), Expect = e-130
Identities = 253/434 (58%), Positives = 296/434 (68%), Gaps = 14/434 (3%)
Frame = +1
Query: 436 PEVHESGNDQKSDSAVNDSE-KKWPGWPGENVFRLLVPVQKVGSIIGRKGEYIKKTCEET 612
PE +S Q S+ +E KKWPGWPGENVFR+LVPVQKVGSIIGRKGE+IKK EET
Sbjct: 95 PEDFDSLPKQGSEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEET 154
Query: 613 KARIKVLDGPPGTTERTVMISAKELPDVAIPPAVDGLLKVHKRIXXXXXXXXXXXXXXXX 792
KARIK+LDGPPG +ER VM+SAKE PD IPPAVDGLL+VHK++
Sbjct: 155 KARIKILDGPPGISERAVMVSAKEEPDCPIPPAVDGLLRVHKQVINVDRDLADSALAAGR 214
Query: 793 XXCTRMLVAATQGGSLIGKQGATIKSIQDASNCIIRVLGRENLPVFALPDDXXXXXXXXX 972
TR+LVA TQ GSLIGKQG+TIKSIQD S C IRVLG ENLP+FAL DD
Sbjct: 215 SVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGES 274
Query: 973 XXXHKAIELIANHLRKFLVDRSVIGIFEMQMQSPNTHGNQDAPPPQSWG--PQGFSMNTG 1146
HKA+ELIA HLRKFLVDRS++G+FE QMQ + NQ+ PP Q+WG PQGF G
Sbjct: 275 AGVHKAVELIAVHLRKFLVDRSIVGVFETQMQMSDVRVNQNLPPHQNWGPPPQGFPAPAG 334
Query: 1147 GGHG----FAPNHQYAPPPRQFDNYYPPADMPPIEKQPRSG-PPAYGRDMTMGT-QPNMQ 1308
GG G FAPNHQY PP +D+YYPP ++PP++K G PPAY RD +MG + Q
Sbjct: 335 GGGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQ 394
Query: 1309 PHQSMVTKVSRNMQIPLTYADAVIGTSGANISYIRRASGATIAIQETRGVPDEMTVEING 1488
P QS+VTKV+++MQIPLTYADAVIG SG NISYIRRASGA+I IQETRGVP EMTVEI+G
Sbjct: 395 PQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISG 454
Query: 1489 SASEVQTAQQLIQNSI-XXXXXXXXXXXXXXXXXYNPYPNHGAAYLPHQQDG---AGHAP 1656
++S++Q AQQL+QN + Y+ YP Y P GHAP
Sbjct: 455 TSSQIQAAQQLVQNFMAEAASATQDPMGGSVSQGYSAYPTTAPVYAPPPTSAGGHTGHAP 514
Query: 1657 AGDYGSVYG-NYGY 1695
+ DYG VYG NYGY
Sbjct: 515 SADYGPVYGTNYGY 528
>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 468 bits (1205), Expect = e-129
Identities = 253/433 (58%), Positives = 299/433 (69%), Gaps = 6/433 (1%)
Frame = +1
Query: 415 ITNDSNPPEVHESGNDQKSDSAVNDSEKKWPGWPGENVFRLLVPVQKVGSIIGRKGEYIK 594
+ DS P + + G D DSA+ EK+WPGWPGE+VFR+LVP QKVGSIIGRKGE+IK
Sbjct: 85 LPEDSQPQQ--KRGRDD--DSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIK 140
Query: 595 KTCEETKARIKVLDGPPGTTERTVMISAKELPDVAIPPAVDGLLKVHKRIXXXXXXXXXX 774
K EET+ARIK+LDGPPGT ER VM+SAKE PD ++PPA+DGLLKVHKRI
Sbjct: 141 KIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSH 200
Query: 775 XXXXXXXXCTRMLVAATQGGSLIGKQGATIKSIQDASNCIIRVLGRENLPVFALPDDXXX 954
TR+LVAA+Q GSLIGKQG T+KSIQ+ASNCI+RVLG E+LP+FAL DD
Sbjct: 201 MPPGGKVS-TRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVV 259
Query: 955 XXXXXXXXXHKAIELIANHLRKFLVDRSVIGIFEMQMQSPNTHGNQDAPPPQSWGP-QGF 1131
HKA+ELIA+HLRKFLVDRSVI +FEMQMQ N + PP Q WGP QG
Sbjct: 260 EVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPP-IEHMPPHQPWGPPQGL 318
Query: 1132 SMNTGGGHGFAPNHQYAPPPRQFDNYYPPADM-PPIEKQPRSGPPAYGRDMTMG--TQPN 1302
N GG GF PN Y PPPRQ D+YYPP ++ PP+EKQP G AYGR++ MG +
Sbjct: 319 PPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSS 378
Query: 1303 MQPHQSMVTKVSRNMQIPLTYADAVIGTSGANISYIRRASGATIAIQETRGVPDEMTVEI 1482
QP SM+T+V++ MQIPL+YADAVIGT+GA+ISYIRRASGAT+ IQETRGVP EMTVEI
Sbjct: 379 AQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI 438
Query: 1483 NGSASEVQTAQQLIQNSI-XXXXXXXXXXXXXXXXXYNPYPNHGAAYLPHQQDGAGHAPA 1659
NG+AS+VQ AQQLIQN + YN Y HG+ Y + A +
Sbjct: 439 NGTASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHT 498
Query: 1660 GDYGSVYG-NYGY 1695
G YG VYG NYGY
Sbjct: 499 GGYGPVYGANYGY 511
>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 468 bits (1205), Expect = e-129
Identities = 253/433 (58%), Positives = 299/433 (69%), Gaps = 6/433 (1%)
Frame = +1
Query: 415 ITNDSNPPEVHESGNDQKSDSAVNDSEKKWPGWPGENVFRLLVPVQKVGSIIGRKGEYIK 594
+ DS P + + G D DSA+ EK+WPGWPGE+VFR+LVP QKVGSIIGRKGE+IK
Sbjct: 16 LPEDSQPQQ--KRGRDD--DSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIK 71
Query: 595 KTCEETKARIKVLDGPPGTTERTVMISAKELPDVAIPPAVDGLLKVHKRIXXXXXXXXXX 774
K EET+ARIK+LDGPPGT ER VM+SAKE PD ++PPA+DGLLKVHKRI
Sbjct: 72 KIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSH 131
Query: 775 XXXXXXXXCTRMLVAATQGGSLIGKQGATIKSIQDASNCIIRVLGRENLPVFALPDDXXX 954
TR+LVAA+Q GSLIGKQG T+KSIQ+ASNCI+RVLG E+LP+FAL DD
Sbjct: 132 MPPGGKVS-TRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVV 190
Query: 955 XXXXXXXXXHKAIELIANHLRKFLVDRSVIGIFEMQMQSPNTHGNQDAPPPQSWGP-QGF 1131
HKA+ELIA+HLRKFLVDRSVI +FEMQMQ N + PP Q WGP QG
Sbjct: 191 EVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPP-IEHMPPHQPWGPPQGL 249
Query: 1132 SMNTGGGHGFAPNHQYAPPPRQFDNYYPPADM-PPIEKQPRSGPPAYGRDMTMG--TQPN 1302
N GG GF PN Y PPPRQ D+YYPP ++ PP+EKQP G AYGR++ MG +
Sbjct: 250 PPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSS 309
Query: 1303 MQPHQSMVTKVSRNMQIPLTYADAVIGTSGANISYIRRASGATIAIQETRGVPDEMTVEI 1482
QP SM+T+V++ MQIPL+YADAVIGT+GA+ISYIRRASGAT+ IQETRGVP EMTVEI
Sbjct: 310 AQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI 369
Query: 1483 NGSASEVQTAQQLIQNSI-XXXXXXXXXXXXXXXXXYNPYPNHGAAYLPHQQDGAGHAPA 1659
NG+AS+VQ AQQLIQN + YN Y HG+ Y + A +
Sbjct: 370 NGTASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHT 429
Query: 1660 GDYGSVYG-NYGY 1695
G YG VYG NYGY
Sbjct: 430 GGYGPVYGANYGY 442
>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 548
Score = 468 bits (1204), Expect = e-129
Identities = 253/428 (59%), Positives = 298/428 (69%), Gaps = 9/428 (2%)
Frame = +1
Query: 439 EVHESGNDQKSDSAVNDSEKKWPGWPGENVFRLLVPVQKVGSIIGRKGEYIKKTCEETKA 618
+ E G+D +D+ EKKWPGWPGE+VFR+LVP QKVGSIIGRKGE+IKK EET+A
Sbjct: 126 QAQEKGHD--ADTVSGGIEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRA 183
Query: 619 RIKVLDGPPGTTERTVMISAKELPDVAIPPAVDGLLKVHKRIXXXXXXXXXXXXXXXXXX 798
RIK+LDGPPGTTER VM+SAKE PD A+PPA+DGLL+VHKRI
Sbjct: 184 RIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTK 243
Query: 799 C-TRMLVAATQGGSLIGKQGATIKSIQDASNCIIRVLGRENLPVFALPDDXXXXXXXXXX 975
TR+LV A+Q GSLIGKQG T+KSIQ+AS+C++RVLG E+LPVFAL DD
Sbjct: 244 VSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAA 303
Query: 976 XXHKAIELIANHLRKFLVDRSVIGIFEMQMQSPNTHGNQDAPPPQSWGP-QGFSMNTGGG 1152
HKA+ELIA+HLRKFLVDRS+I +FEM MQ N + PP QSWGP QG N GGG
Sbjct: 304 GVHKAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGG 363
Query: 1153 HGFAPNHQYAPPPRQFDNYYPPADM-PPIEKQPRSGPPAYGRDMTMGT--QPNMQPHQSM 1323
G+ N QY PPPRQ +NYYPPAD+ PP+EKQP G AYGR+ MG N Q SM
Sbjct: 364 PGYG-NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSM 422
Query: 1324 VTKVSRNMQIPLTYADAVIGTSGANISYIRRASGATIAIQETRGVPDEMTVEINGSASEV 1503
+T++++ MQIPL+YADAVIGT+G +ISYIRRASGAT+ IQETRGVP EMTVEI+G+AS+V
Sbjct: 423 ITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQV 482
Query: 1504 QTAQQLIQNSI-XXXXXXXXXXXXXXXXXYNPYPNHGAAYL--PHQQDGAGHAPAGDYGS 1674
QTAQQLIQN + YNPY HG+ Y P AGH G YGS
Sbjct: 483 QTAQQLIQNFMAEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAGH--TGGYGS 540
Query: 1675 VYG-NYGY 1695
VYG NYGY
Sbjct: 541 VYGTNYGY 548