BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009349
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   119   2e-25
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             119   3e-25
emb|CAN76324.1| hypothetical protein VITISV_011885 [Vitis vinifera]   119   3e-25
gb|AAV31353.1| putative polyprotein [Oryza sativa Japonica Group]     119   3e-25
gb|AAS79740.1| putative polyprotein [Oryza sativa Japonica Group]     119   3e-25

>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/98 (54%), Positives = 74/98 (75%)
 Frame = +3

Query: 3   FITHRAVYAYRVLPMGLMNAGATYQKAMNKIFSSQIGRNLEVYVDDVIIKSQVKEAHLAD 182
           FIT R +Y Y+V+P GL NAGATY + +NK+FS  +G+ +EVY+DD++IKS  KE H+  
Sbjct: 575 FITDRGIYCYKVMPFGLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKH 634

Query: 183 LGETFRNLRASRLKLNPAKCTFGVASGKFLGHVISGQG 296
           L E F  L   ++KLNPAKCTFGV SG+FLG++++ +G
Sbjct: 635 LEECFAILNQYQMKLNPAKCTFGVPSGEFLGYIVTKRG 672


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/98 (53%), Positives = 75/98 (76%)
 Frame = +3

Query: 3   FITHRAVYAYRVLPMGLMNAGATYQKAMNKIFSSQIGRNLEVYVDDVIIKSQVKEAHLAD 182
           FIT R +Y Y+V+P GL NAGATYQ+ +NK+F + +G+ +EVY+DD+++KS  KE H+  
Sbjct: 132 FITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKH 191

Query: 183 LGETFRNLRASRLKLNPAKCTFGVASGKFLGHVISGQG 296
           L E F  L   ++KLNPAKCTFGV SG+FLG++++ +G
Sbjct: 192 LEECFGILNKYQMKLNPAKCTFGVPSGEFLGYIVTERG 229


>emb|CAN76324.1| hypothetical protein VITISV_011885 [Vitis vinifera]
          Length = 290

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = +3

Query: 3   FITHRAVYAYRVLPMGLMNAGATYQKAMNKIFSSQIGRNLEVYVDDVIIKSQVKEAHLAD 182
           FIT   +Y Y+V+P GL NAGATYQ+ M KIF   IGR +EVY+DD+++KS+ +E H+  
Sbjct: 132 FITPHDLYCYKVMPFGLKNAGATYQRLMTKIFRPLIGRTVEVYIDDIVVKSKTREEHVLH 191

Query: 183 LGETFRNLRASRLKLNPAKCTFGVASGKFLGHVISGQG 296
           L E F  LR   +KLNP+KCTFGV++GKFLG ++S +G
Sbjct: 192 LQEVFHLLRKYGMKLNPSKCTFGVSAGKFLGFMVSQRG 229


>gb|AAV31353.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/98 (57%), Positives = 74/98 (75%)
 Frame = +3

Query: 3    FITHRAVYAYRVLPMGLMNAGATYQKAMNKIFSSQIGRNLEVYVDDVIIKSQVKEAHLAD 182
            FIT    Y Y  +P GL NAGATYQ+ + + FS+QIGRN+E YVDDV+IK++ K+  ++D
Sbjct: 899  FITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVIKTKQKDDLISD 958

Query: 183  LGETFRNLRASRLKLNPAKCTFGVASGKFLGHVISGQG 296
            L ETF ++RA R+KLNP KCTFGV SGK LG ++S +G
Sbjct: 959  LEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRG 996


>gb|AAS79740.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1756

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/98 (57%), Positives = 74/98 (75%)
 Frame = +3

Query: 3    FITHRAVYAYRVLPMGLMNAGATYQKAMNKIFSSQIGRNLEVYVDDVIIKSQVKEAHLAD 182
            FIT    Y Y  +P GL NAGATYQ+ + + FS+QIGRN+E YVDDV+IK++ K+  ++D
Sbjct: 856  FITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVIKTKQKDDLISD 915

Query: 183  LGETFRNLRASRLKLNPAKCTFGVASGKFLGHVISGQG 296
            L ETF ++RA R+KLNP KCTFGV SGK LG ++S +G
Sbjct: 916  LEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRG 953