BLASTX nr result

ID: Cnidium21_contig00009348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009348
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK11255.1|AF329729_1 regulator of gene silencing [Nicotiana ...   152   2e-34
gb|AFU81780.1| regulator of gene silencing [Nicotiana benthamiana]    150   5e-34
gb|AAM95458.1| calmodulin-like protein [Datura metel]                 140   4e-31
ref|XP_002307832.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30
ref|NP_001234570.1| regulator of gene silencing [Solanum lycoper...   137   6e-30

>gb|AAK11255.1|AF329729_1 regulator of gene silencing [Nicotiana tabacum]
          Length = 190

 Score =  152 bits (383), Expect = 2e-34
 Identities = 82/149 (55%), Positives = 106/149 (71%), Gaps = 5/149 (3%)
 Frame = +1

Query: 313 STSSKPFNEELVQRVFNYFDEDEDGKITASELRTCMTAVGGREMTLAEAEMAVKTAXXXX 492
           S+SSK  N   ++RVF YFDE+ DGK++ +ELR C+ AVGG E+T+ EAEMAV+ +    
Sbjct: 44  SSSSKSNNSGELERVFTYFDENGDGKVSPAELRRCVKAVGG-ELTVEEAEMAVRLSDSDG 102

Query: 493 XXXXXXXXFSKLLETSCGTEEEELRE-----AFGLYAAEGTSSITAKSLKRMLSRLGQST 657
                   F+KL+E   G EEE  +E     AFG+Y  EG+  IT KSLK MLSRLG+ST
Sbjct: 103 DGLLGLEDFTKLME---GMEEERNKESELIGAFGMYEMEGSGYITPKSLKMMLSRLGEST 159

Query: 658 SVDNCRAMIRKFDLNGDGVLNFDEFRVMM 744
           S+DNC+AMI++FD+NGDGVLNFDEF+ MM
Sbjct: 160 SIDNCKAMIQRFDINGDGVLNFDEFKAMM 188


>gb|AFU81780.1| regulator of gene silencing [Nicotiana benthamiana]
          Length = 188

 Score =  150 bits (379), Expect = 5e-34
 Identities = 79/148 (53%), Positives = 107/148 (72%), Gaps = 5/148 (3%)
 Frame = +1

Query: 316 TSSKPFNEELVQRVFNYFDEDEDGKITASELRTCMTAVGGREMTLAEAEMAVKTAXXXXX 495
           +SS+  N   ++RVF YFD++ DGK++ +ELR C+ AVGG E+T+ EAEMAV+ +     
Sbjct: 43  SSSRSNNSSELERVFTYFDDNGDGKVSPAELRRCVKAVGG-ELTVEEAEMAVRLSDSDGD 101

Query: 496 XXXXXXXFSKLLETSCGTEEEELRE-----AFGLYAAEGTSSITAKSLKRMLSRLGQSTS 660
                  F+KL+E   G EEE  +E     AFG+Y  EG+  +T KSLKRMLSRLG+STS
Sbjct: 102 GLLGLEDFTKLME---GMEEERNKESELIGAFGMYEMEGSGYVTPKSLKRMLSRLGESTS 158

Query: 661 VDNCRAMIRKFDLNGDGVLNFDEFRVMM 744
           +DNC+AMI++FD+NGDGVL+FDEF+VMM
Sbjct: 159 IDNCKAMIQRFDINGDGVLSFDEFKVMM 186


>gb|AAM95458.1| calmodulin-like protein [Datura metel]
          Length = 191

 Score =  140 bits (354), Expect = 4e-31
 Identities = 79/147 (53%), Positives = 99/147 (67%), Gaps = 5/147 (3%)
 Frame = +1

Query: 319 SSKPFNEELVQRVFNYFDEDEDGKITASELRTCMTAVGGREMTLAEAEMAVKTAXXXXXX 498
           SS   N   ++RVF YFDE+ DGK++  ELR C+ AVGG E+T  EAEMAV+ +      
Sbjct: 47  SSSGSNNNELERVFTYFDENGDGKVSPVELRRCVRAVGG-ELTEEEAEMAVRLSDSDGDG 105

Query: 499 XXXXXXFSKLLETSCGTEEEELRE-----AFGLYAAEGTSSITAKSLKRMLSRLGQSTSV 663
                 F+KL+E   G EEE  +E     AFG+Y  +    IT KSLKRMLSRLG+STS+
Sbjct: 106 LLGLEDFTKLME---GMEEERNKESELIGAFGMYEEKEGGYITPKSLKRMLSRLGESTSI 162

Query: 664 DNCRAMIRKFDLNGDGVLNFDEFRVMM 744
           D C+ MIR+FDLNGDGVL+FDEF+VMM
Sbjct: 163 DKCKVMIRRFDLNGDGVLSFDEFKVMM 189


>ref|XP_002307832.1| predicted protein [Populus trichocarpa] gi|222857281|gb|EEE94828.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  138 bits (347), Expect = 3e-30
 Identities = 76/151 (50%), Positives = 102/151 (67%), Gaps = 3/151 (1%)
 Frame = +1

Query: 301 VEDTSTSSKPFNEELVQRVFNYFDEDEDGKITASELRTCMTAVGGREMTLAEAEMAVKTA 480
           V +++++        +QRVFNYFDED DG+I+ +ELR+C+T VGG ++++ EAE AV  +
Sbjct: 47  VNNSTSAINVIGNNQLQRVFNYFDEDGDGRISPAELRSCITTVGG-QLSIEEAEAAVSFS 105

Query: 481 XXXXXXXXXXXXFSKLLETSCGTEE--EELREAFGLYAAE-GTSSITAKSLKRMLSRLGQ 651
                       F  L+  S   EE  EELR+AFG+Y  E G+  IT  SLKRMLSRLG+
Sbjct: 106 DMDGDGLLGFQDFQCLMAGSASEEEKTEELRQAFGMYETEPGSGCITPTSLKRMLSRLGK 165

Query: 652 STSVDNCRAMIRKFDLNGDGVLNFDEFRVMM 744
           S S+++C+AMIR FDLNGDGVL+F EF VMM
Sbjct: 166 SRSINDCKAMIRTFDLNGDGVLSFHEFSVMM 196


>ref|NP_001234570.1| regulator of gene silencing [Solanum lycopersicum]
           gi|49425165|gb|AAT65969.1| regulator of gene silencing
           [Solanum lycopersicum]
          Length = 198

 Score =  137 bits (344), Expect = 6e-30
 Identities = 78/142 (54%), Positives = 96/142 (67%), Gaps = 5/142 (3%)
 Frame = +1

Query: 334 NEELVQRVFNYFDEDEDGKITASELRTCMTAVGGREMTLAEAEMAVKTAXXXXXXXXXXX 513
           N   ++RVF YFDE+ DGK++  ELR CM AVGG E+T+ EAEM V+ +           
Sbjct: 61  NSGELERVFTYFDENGDGKVSPMELRRCMKAVGG-EITVEEAEMVVRLSDSDGDGLLGFE 119

Query: 514 XFSKLLETSCGTEEE-----ELREAFGLYAAEGTSSITAKSLKRMLSRLGQSTSVDNCRA 678
            F+KL+E   G EEE     EL  AFG+Y  EG   IT KSLK MLSRLG+STS+D C+ 
Sbjct: 120 DFTKLME---GMEEERNKESELMGAFGMYEMEGY--ITPKSLKMMLSRLGESTSIDKCKV 174

Query: 679 MIRKFDLNGDGVLNFDEFRVMM 744
           MIR+FD NGDGVL+FDEF+VMM
Sbjct: 175 MIRRFDTNGDGVLSFDEFKVMM 196


Top