BLASTX nr result

ID: Cnidium21_contig00009321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009321
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335427.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002330251.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002336415.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002437466.1| hypothetical protein SORBIDRAFT_10g027620 [S...    72   6e-11
ref|XP_002326560.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11

>ref|XP_002335427.1| predicted protein [Populus trichocarpa] gi|222834154|gb|EEE72631.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
 Frame = -2

Query: 172 GNFILSDGRS---VIWQSFDHPTDTWLSGGKLGID--GSLINNLTSWKDEYDPAPGNFSV 8
           GNF++ DG +   + WQSFD+PTDTWL GGKLGI+     +  L SWK+  DPAPG FS+
Sbjct: 15  GNFVVRDGSNPPTIYWQSFDYPTDTWLPGGKLGINKHTGQVQRLISWKNSEDPAPGMFSI 74

Query: 7   GI 2
           GI
Sbjct: 75  GI 76


>ref|XP_002330251.1| predicted protein [Populus trichocarpa] gi|222871707|gb|EEF08838.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
 Frame = -2

Query: 172 GNFILSDGRS---VIWQSFDHPTDTWLSGGKLGID--GSLINNLTSWKDEYDPAPGNFSV 8
           GNF++ DG +   + WQSFD+PTDTWL GGKLGI+     +  L SWK+  DPAPG FS+
Sbjct: 147 GNFVVRDGSNPSTIYWQSFDYPTDTWLPGGKLGINKHTGQVRRLISWKNSEDPAPGMFSM 206

Query: 7   GI 2
           GI
Sbjct: 207 GI 208


>ref|XP_002336415.1| predicted protein [Populus trichocarpa] gi|222834942|gb|EEE73391.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
 Frame = -2

Query: 172 GNFILSDGRS---VIWQSFDHPTDTWLSGGKLGID--GSLINNLTSWKDEYDPAPGNFSV 8
           GNF++ DG +   + WQSFD+PTDTWL GGKLGI+     +  L SWK+  DPAPG FS+
Sbjct: 147 GNFVVRDGSNPSTIYWQSFDYPTDTWLPGGKLGINKHTGQVRRLISWKNSEDPAPGMFSM 206

Query: 7   GI 2
           GI
Sbjct: 207 GI 208


>ref|XP_002437466.1| hypothetical protein SORBIDRAFT_10g027620 [Sorghum bicolor]
           gi|241915689|gb|EER88833.1| hypothetical protein
           SORBIDRAFT_10g027620 [Sorghum bicolor]
          Length = 826

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = -2

Query: 175 SGNFILS--DGRSVIWQSFDHPTDTWLSGGKLGIDGSL--INNLTSWKDEYDPAPGNFSV 8
           SGN +L   DG  V+WQS DHPTDTWL GG+LG++     +  LTSW+   DPAPG +S+
Sbjct: 146 SGNLVLRRHDGGEVLWQSIDHPTDTWLPGGRLGMNKITGDVQALTSWRSTSDPAPGMYSL 205

Query: 7   GI 2
           GI
Sbjct: 206 GI 207


>ref|XP_002326560.1| predicted protein [Populus trichocarpa] gi|222833882|gb|EEE72359.1|
           predicted protein [Populus trichocarpa]
          Length = 818

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
 Frame = -2

Query: 175 SGNFILSDGRSV---IWQSFDHPTDTWLSGGKLGIDGSL--INNLTSWKDEYDPAPGNFS 11
           +GNF++ D  +     WQSFD+PTDTWL GGKLGI+     +  L SWK+  DPAPG FS
Sbjct: 129 NGNFVIRDVSNTSITYWQSFDNPTDTWLPGGKLGINKQTGQVQRLISWKNSEDPAPGMFS 188

Query: 10  VGI 2
           VGI
Sbjct: 189 VGI 191


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