BLASTX nr result

ID: Cnidium21_contig00009311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009311
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306353.1| ABC transporter family protein [Populus tric...    81   1e-17
ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5...    82   1e-17
emb|CBI21514.3| unnamed protein product [Vitis vinifera]               82   1e-17
ref|XP_004141961.1| PREDICTED: ABC transporter F family member 5...    79   4e-17
ref|XP_003602495.1| ABC transporter F family member [Medicago tr...    77   1e-16

>ref|XP_002306353.1| ABC transporter family protein [Populus trichocarpa]
           gi|222855802|gb|EEE93349.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 722

 Score = 80.9 bits (198), Expect(2) = 1e-17
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -2

Query: 441 DAISEYKGTVITVSHD*YFLKQIVNRVLEVKDGNLQDYMGDYNVRME 301
           +AISEYKGTVITVSHD YF+KQIVNRV+EVKDG LQDY GDYN  +E
Sbjct: 595 EAISEYKGTVITVSHDRYFIKQIVNRVVEVKDGKLQDYAGDYNYYLE 641



 Score = 34.3 bits (77), Expect(2) = 1e-17
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -3

Query: 599 VLDEPTKHLDISSKDMLE 546
           VLDEPT HLDI SK+MLE
Sbjct: 577 VLDEPTNHLDIPSKEMLE 594


>ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5 [Vitis vinifera]
          Length = 718

 Score = 82.0 bits (201), Expect(2) = 1e-17
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -2

Query: 441 DAISEYKGTVITVSHD*YFLKQIVNRVLEVKDGNLQDYMGDYNVRME 301
           +AI+EYKGTV+TVSHD YF+KQIVNRV+EVKDGNLQDY GDYN  +E
Sbjct: 610 EAITEYKGTVVTVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNYYLE 656



 Score = 33.1 bits (74), Expect(2) = 1e-17
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -3

Query: 599 VLDEPTKHLDISSKDMLE 546
           VLDEPT HLDI +K+MLE
Sbjct: 592 VLDEPTNHLDIPTKEMLE 609


>emb|CBI21514.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score = 82.0 bits (201), Expect(2) = 1e-17
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -2

Query: 441 DAISEYKGTVITVSHD*YFLKQIVNRVLEVKDGNLQDYMGDYNVRME 301
           +AI+EYKGTV+TVSHD YF+KQIVNRV+EVKDGNLQDY GDYN  +E
Sbjct: 547 EAITEYKGTVVTVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNYYLE 593



 Score = 33.1 bits (74), Expect(2) = 1e-17
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -3

Query: 599 VLDEPTKHLDISSKDMLE 546
           VLDEPT HLDI +K+MLE
Sbjct: 529 VLDEPTNHLDIPTKEMLE 546


>ref|XP_004141961.1| PREDICTED: ABC transporter F family member 5-like [Cucumis sativus]
           gi|449519128|ref|XP_004166587.1| PREDICTED: ABC
           transporter F family member 5-like [Cucumis sativus]
          Length = 714

 Score = 79.0 bits (193), Expect(2) = 4e-17
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -2

Query: 441 DAISEYKGTVITVSHD*YFLKQIVNRVLEVKDGNLQDYMGDYNVRME 301
           +AI+EY GTVITVSHD YF+KQIVNRV+EVK+GNLQDY GDYN  +E
Sbjct: 604 EAITEYSGTVITVSHDRYFIKQIVNRVIEVKEGNLQDYAGDYNYYLE 650



 Score = 34.3 bits (77), Expect(2) = 4e-17
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -3

Query: 599 VLDEPTKHLDISSKDMLE 546
           VLDEPT HLDI SK+MLE
Sbjct: 586 VLDEPTNHLDIPSKEMLE 603


>ref|XP_003602495.1| ABC transporter F family member [Medicago truncatula]
           gi|355491543|gb|AES72746.1| ABC transporter F family
           member [Medicago truncatula]
          Length = 700

 Score = 77.4 bits (189), Expect(2) = 1e-16
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -2

Query: 441 DAISEYKGTVITVSHD*YFLKQIVNRVLEVKDGNLQDYMGDYNVRME 301
           +AI+EY+GTVITVSHD YF+KQIVNRV+EVKDG +QDY GDYN  +E
Sbjct: 592 EAITEYEGTVITVSHDRYFIKQIVNRVIEVKDGTVQDYAGDYNYYLE 638



 Score = 34.3 bits (77), Expect(2) = 1e-16
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -3

Query: 599 VLDEPTKHLDISSKDMLE 546
           VLDEPT HLDI SK+MLE
Sbjct: 574 VLDEPTNHLDIPSKEMLE 591


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