BLASTX nr result

ID: Cnidium21_contig00009243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009243
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   300   5e-79
ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-l...   275   1e-71
gb|ACU19123.1| unknown [Glycine max]                                  275   1e-71

>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  300 bits (767), Expect = 5e-79
 Identities = 150/205 (73%), Positives = 163/205 (79%)
 Frame = -1

Query: 976 MDEEEHEVYGGEIPEMEGDVDLHHADVDMSTAIDDDAVKDLDXXXXXXXXXXXXXXXXXX 797
           M+EEEHEVYGGEIP+MEGD+D H+ D+DMS A DDDAVK+LD                  
Sbjct: 1   MEEEEHEVYGGEIPDMEGDIDPHNVDMDMSAA-DDDAVKELDEMKKRLKEMEEEAAALRE 59

Query: 796 MQAKVEKEMGAVQDPANAAATQASREEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 617
           MQAKVEKEMGAVQDPA+AAA QA++EE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRV
Sbjct: 60  MQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV 119

Query: 616 TILTDKFGQPKGFXXXXXXXXXXXXXALSLTESELHGRQLKVMAKRTNVPGMKQYRGRRF 437
           TILTDKFGQPKGF             AL L ESELHGRQLKV+ KRTNVPGMKQYR RRF
Sbjct: 120 TILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRF 179

Query: 436 NPFMGYRSRRPYVPPYFYSPYGYGK 362
           NP+MGYR RRPYVPPYFYSPYGYGK
Sbjct: 180 NPYMGYRFRRPYVPPYFYSPYGYGK 204


>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  298 bits (764), Expect = 1e-78
 Identities = 151/206 (73%), Positives = 162/206 (78%)
 Frame = -1

Query: 976 MDEEEHEVYGGEIPEMEGDVDLHHADVDMSTAIDDDAVKDLDXXXXXXXXXXXXXXXXXX 797
           M+EEEHEVYGGEIP++EGD+D H+ADVDMS A DDDAVK+LD                  
Sbjct: 1   MEEEEHEVYGGEIPDVEGDMDPHNADVDMSAA-DDDAVKELDEMKKRLKEMEEEAAALRE 59

Query: 796 MQAKVEKEMGAVQDPANAAATQASREEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 617
           MQAKVEKEMGAVQDPA AAA QA+REE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRV
Sbjct: 60  MQAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV 119

Query: 616 TILTDKFGQPKGFXXXXXXXXXXXXXALSLTESELHGRQLKVMAKRTNVPGMKQYRGRRF 437
           TILTDKFGQPKGF             AL+L ESELHGRQLKV  KRTNVPGMKQYR RR 
Sbjct: 120 TILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRI 179

Query: 436 NPFMGYRSRRPYVPPYFYSPYGYGKV 359
           NP+MGYR RRPY PPYFYSPYGYGKV
Sbjct: 180 NPYMGYRFRRPYAPPYFYSPYGYGKV 205


>ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|222852871|gb|EEE90418.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  288 bits (738), Expect = 1e-75
 Identities = 146/206 (70%), Positives = 160/206 (77%)
 Frame = -1

Query: 976 MDEEEHEVYGGEIPEMEGDVDLHHADVDMSTAIDDDAVKDLDXXXXXXXXXXXXXXXXXX 797
           M+EEEHEVYGGEIP++EGD+D H+ADVDMS A +DDAVK+LD                  
Sbjct: 1   MEEEEHEVYGGEIPDVEGDMDPHNADVDMSAA-EDDAVKELDEMKKRLKEMEEEAAALRE 59

Query: 796 MQAKVEKEMGAVQDPANAAATQASREEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 617
           MQAKVEKEMGAV DPA+AAA QA++EE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRV
Sbjct: 60  MQAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV 119

Query: 616 TILTDKFGQPKGFXXXXXXXXXXXXXALSLTESELHGRQLKVMAKRTNVPGMKQYRGRRF 437
           TILTDKFGQPKGF             AL+L ESELHGRQLKV  KRTNVPGMKQY  R F
Sbjct: 120 TILTDKFGQPKGFAYVEFVEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYHPRSF 179

Query: 436 NPFMGYRSRRPYVPPYFYSPYGYGKV 359
           NP+MG R RRPY PPYFYSPYGYGKV
Sbjct: 180 NPYMGNRFRRPYAPPYFYSPYGYGKV 205


>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 215

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/206 (67%), Positives = 158/206 (76%)
 Frame = -1

Query: 976 MDEEEHEVYGGEIPEMEGDVDLHHADVDMSTAIDDDAVKDLDXXXXXXXXXXXXXXXXXX 797
           M+EEEHEVYGGEIP+ EG+++    D+DMS A DD AVK+LD                  
Sbjct: 1   MEEEEHEVYGGEIPD-EGEME---GDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALRE 56

Query: 796 MQAKVEKEMGAVQDPANAAATQASREEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 617
           MQAKV+KE+G+VQDPAN+AA+QA++EE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRV
Sbjct: 57  MQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV 116

Query: 616 TILTDKFGQPKGFXXXXXXXXXXXXXALSLTESELHGRQLKVMAKRTNVPGMKQYRGRRF 437
           TILTDKFGQPKGF             AL L ESELHGRQLKV+ KRTNVPGMKQYR RRF
Sbjct: 117 TILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRF 176

Query: 436 NPFMGYRSRRPYVPPYFYSPYGYGKV 359
           NP+M Y  RRPY PPYFYSPYGYGKV
Sbjct: 177 NPYMAYGFRRPYTPPYFYSPYGYGKV 202


>gb|ACU19123.1| unknown [Glycine max]
          Length = 205

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/206 (67%), Positives = 158/206 (76%)
 Frame = -1

Query: 976 MDEEEHEVYGGEIPEMEGDVDLHHADVDMSTAIDDDAVKDLDXXXXXXXXXXXXXXXXXX 797
           M+EEEHEVYGGEIP+ EG+++    D+DMS A DD AVK+LD                  
Sbjct: 1   MEEEEHEVYGGEIPD-EGEME---GDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALRE 56

Query: 796 MQAKVEKEMGAVQDPANAAATQASREEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 617
           MQAKV+KE+G+VQDPAN+AA+QA++EE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRV
Sbjct: 57  MQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV 116

Query: 616 TILTDKFGQPKGFXXXXXXXXXXXXXALSLTESELHGRQLKVMAKRTNVPGMKQYRGRRF 437
           TILTDKFGQPKGF             AL L ESELHGRQLKV+ KRTNVPGMKQYR RRF
Sbjct: 117 TILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRF 176

Query: 436 NPFMGYRSRRPYVPPYFYSPYGYGKV 359
           NP+M Y  RRPY PPYFYSPYGYGKV
Sbjct: 177 NPYMAYGFRRPYTPPYFYSPYGYGKV 202


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