BLASTX nr result
ID: Cnidium21_contig00009241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00009241 (1464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera... 112 3e-22 ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera... 110 9e-22 ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max] 88 6e-20 ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypod... 104 7e-20 gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 ... 90 8e-20 >ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera] gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera] Length = 1053 Score = 112 bits (279), Expect = 3e-22 Identities = 69/164 (42%), Positives = 96/164 (58%), Gaps = 8/164 (4%) Frame = +3 Query: 408 LVPGRSGSAPPSMEGSIAAAKNIIANQHFDSNASLASINSFIDSHVSGENVDADPAYVAY 587 +VP RSGSAPPSMEGS AA N++ ++ + ++SLAS++S I++ S E + +DPAY AY Sbjct: 55 MVPNRSGSAPPSMEGSFAAIGNLMTQRN-NLDSSLASLSSAIENSESEEQLRSDPAYFAY 113 Query: 588 L-SSVKMNSRITSTQIPSNNKRLVRQTDTAGYDRILASSDDPSRGSLLMPHVKLPTHREE 764 S+V +N R+ I N+RLVR G + L S DD GSL + L TH+EE Sbjct: 114 YCSNVNLNPRLPPPLISRENQRLVRHIGGFGNNWRLTSFDDSGNGSLHLSRGSLSTHKEE 173 Query: 765 IEDDRSAKLTPSNWPNRSTSL-------SCPSEVPSQLDCIQND 875 EDDRS + T +WP S+++ S S +D IQ D Sbjct: 174 SEDDRSPRQTSDDWPESSSAVMPGQKTASSAGRHKSLVDLIQED 217 >ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera] gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera] Length = 1017 Score = 110 bits (275), Expect = 9e-22 Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Frame = +3 Query: 408 LVPGRSGSAPPSMEGSIAAAKNIIANQHFDSNASLASINSFIDSHVSGENVDADPAYVA- 584 + P RSGSAPPSMEGS AA +N++++Q+ NA A++NS I++ E + ADPAY+A Sbjct: 53 VAPNRSGSAPPSMEGSFAAIENLMSSQNSSLNARYANLNSLIENCEPEEQLRADPAYLAY 112 Query: 585 YLSSVKMNSRITSTQIPSNNKRLVRQTDTAGYDRILASSDDPSRGSLLMPHVKLPTHREE 764 Y S + +N R+ I N+RLVR + G R L S DD SL + L TH+EE Sbjct: 113 YCSKINLNPRLPPPLISWENRRLVRHIGSFGNSRGLTSLDDSGGRSLRLSQGTLSTHKEE 172 Query: 765 IEDDRSAKLTPSNWPNRSTSLSCPSEVP-------SQLDCIQND 875 EDDRS + +W ++S++ + S +D IQ+D Sbjct: 173 SEDDRSPQKPSDDWEDQSSAFWSGQDAAFLAGQHRSSVDLIQDD 216 >ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max] Length = 982 Score = 87.8 bits (216), Expect(2) = 6e-20 Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 1/126 (0%) Frame = +3 Query: 402 KALVPGRSGSAPPSMEGSIAAAKNIIANQHFDSNASLASINSFIDSHVSGENVDADPAYV 581 K + P RSGSAPPS+EGS A +N++ + NAS A+++S + + S E + ADPAY+ Sbjct: 51 KDVAPNRSGSAPPSIEGSFLAIENLLPQHNTTQNASFANLSSAMQNCESEEQLRADPAYL 110 Query: 582 AYL-SSVKMNSRITSTQIPSNNKRLVRQTDTAGYDRILASSDDPSRGSLLMPHVKLPTHR 758 AY S+V +N R+ N+ L R + + ++++DD + SL +P L TH+ Sbjct: 111 AYYNSNVNLNPRLPPPLTSWENRHLGRHIISFRNNWRMSTTDDSGKSSLHLPQRTLSTHK 170 Query: 759 EEIEDD 776 EE EDD Sbjct: 171 EESEDD 176 Score = 37.4 bits (85), Expect(2) = 6e-20 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = +2 Query: 269 METESPIRISES-RTWASLKGTSGYGSANVG-GIDELGLLLHSQTFQGTG 412 M TESPIRISE+ W S K + +GS + ++LG+LL +QG G Sbjct: 1 MATESPIRISEAGGKWPSHKEAAAFGSLSRNMATEDLGILLKGHRYQGGG 50 >ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon] Length = 983 Score = 104 bits (259), Expect = 7e-20 Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 1/140 (0%) Frame = +3 Query: 414 PGRSGSAPPSMEGSIAAAKNIIANQHFDSNASLASINSFIDSHVSGENVDADPAYVAYL- 590 P RSGSAPPSMEGS+AA N+I Q + +ASLA+I++ DS S E + ADPAY Y Sbjct: 57 PNRSGSAPPSMEGSLAALGNLIGQQSGNFDASLANIDNVTDSSKSEEQLRADPAYFDYYG 116 Query: 591 SSVKMNSRITSTQIPSNNKRLVRQTDTAGYDRILASSDDPSRGSLLMPHVKLPTHREEIE 770 S V +N R+ I ++R + + R++ S DD ++GSL +P LPTHREE E Sbjct: 117 SKVNLNPRLPPPLISRESRRFMNRVGKVKEWRVV-SQDDSNKGSLFIPRSTLPTHREEPE 175 Query: 771 DDRSAKLTPSNWPNRSTSLS 830 +DRS +L ++ + +L+ Sbjct: 176 EDRSPRLDSNSTDDAQMNLA 195 >gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] Length = 966 Score = 90.1 bits (222), Expect(2) = 8e-20 Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 4/159 (2%) Frame = +3 Query: 411 VPGRSGSAPPSMEGSIAAAKNIIANQHFDSNASLASINSFIDSHVSGENVDADPAYVA-Y 587 +P RSGSAPPSMEGS AA N++A + ++SL S+ S I++ S E + +DPAY A Y Sbjct: 56 IPSRSGSAPPSMEGSFAAIGNLLAQHNSGMSSSLESLGSVIENCESEEQLRSDPAYFAYY 115 Query: 588 LSSVKMNSRITSTQIPSNNKRLVRQTDTAGYDRILASSDDPSRGSLLMPHVKLPTHREEI 767 S+V +N R+ + N+RLV G + + GSL +P L TH+EE Sbjct: 116 CSNVNLNPRLPPPLLSRENRRLVHHIGGFGNN----WRPESGNGSLQLPKSSLSTHKEEP 171 Query: 768 EDDRSAKLTPSN---WPNRSTSLSCPSEVPSQLDCIQND 875 +DRS + N + + ++ S S +D IQ D Sbjct: 172 NEDRSPRGASENSGVYISGQSTTSLAGRHKSLVDLIQED 210 Score = 34.7 bits (78), Expect(2) = 8e-20 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Frame = +2 Query: 269 METESPIRISES---RTWASLKGTSGYGSA-NVGGIDELGLLLHSQTFQG 406 M TESP+R+ ES R W+S K ++ GS +ELGLLL Q F G Sbjct: 1 MATESPMRMVESGGARKWSSSKDSAVLGSPLRSMAAEELGLLLKRQGFHG 50