BLASTX nr result

ID: Cnidium21_contig00009228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009228
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632453.1| PREDICTED: uncharacterized protein LOC100855...   125   4e-27
emb|CBI33015.3| unnamed protein product [Vitis vinifera]              125   4e-27
dbj|BAB02196.1| unnamed protein product [Arabidopsis thaliana]        108   3e-22
gb|AFK47555.1| unknown [Lotus japonicus]                              108   3e-22
ref|NP_189267.4| Ribosomal protein S21 family protein [Arabidops...   108   3e-22

>ref|XP_003632453.1| PREDICTED: uncharacterized protein LOC100855184 [Vitis vinifera]
          Length = 141

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = +2

Query: 26  STVFKRPSTELNSLSSQLNQWRGIRVRVFQNNLERALTFMQKQMTSSGVERLIKNEQTHH 205
           ST+F+ PS   NSLS +L QWRGIRV+VF  NLE AL  MQ++M SSG+ERLIK EQTHH
Sbjct: 9   STIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERLIKREQTHH 68

Query: 206 IKNSEKRVLARKNLERRLKSQDLA 277
           IKNSEKRVLARKNLERR++SQDLA
Sbjct: 69  IKNSEKRVLARKNLERRIRSQDLA 92


>emb|CBI33015.3| unnamed protein product [Vitis vinifera]
          Length = 106

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = +2

Query: 26  STVFKRPSTELNSLSSQLNQWRGIRVRVFQNNLERALTFMQKQMTSSGVERLIKNEQTHH 205
           ST+F+ PS   NSLS +L QWRGIRV+VF  NLE AL  MQ++M SSG+ERLIK EQTHH
Sbjct: 9   STIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERLIKREQTHH 68

Query: 206 IKNSEKRVLARKNLERRLKSQDLA 277
           IKNSEKRVLARKNLERR++SQDLA
Sbjct: 69  IKNSEKRVLARKNLERRIRSQDLA 92


>dbj|BAB02196.1| unnamed protein product [Arabidopsis thaliana]
          Length = 99

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = +2

Query: 2   NSIASRVSSTVFKRPSTELNSLSSQLNQWRGIRVRVFQNNLERALTFMQKQMTSSGVERL 181
           N+IA RV+  V  RPS     L+ QL Q RGIRV+VF N+L++ALT +QK+M SSG+ERL
Sbjct: 2   NTIAKRVTGLV-TRPS-----LNQQLQQERGIRVKVFSNDLDKALTILQKKMQSSGMERL 55

Query: 182 IKNEQTHHIKNSEKRVLARKNLERRLKSQDLA 277
           IK  QTHHIKNSEK+VLARKNLERR+KS D A
Sbjct: 56  IKGTQTHHIKNSEKKVLARKNLERRIKSIDFA 87


>gb|AFK47555.1| unknown [Lotus japonicus]
          Length = 112

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   NSIASRVSSTVFKRPSTELNSLSS------QLNQWRGIRVRVFQNNLERALTFMQKQMTS 163
           NSIA R+SS +F + +     L+S      QL Q RGIRVRVF  NLE AL  MQ++MTS
Sbjct: 2   NSIARRLSS-LFGKSACATEPLNSGRHQLQQLQQCRGIRVRVFNGNLESALALMQRKMTS 60

Query: 164 SGVERLIKNEQTHHIKNSEKRVLARKNLERRLKSQDLA 277
           SG+ER+IK EQ  HIKNSEKRVLARKNLERRL+S+DLA
Sbjct: 61  SGIERMIKKEQRFHIKNSEKRVLARKNLERRLRSEDLA 98


>ref|NP_189267.4| Ribosomal protein S21 family protein [Arabidopsis thaliana]
           gi|332643628|gb|AEE77149.1| Ribosomal protein S21 family
           protein [Arabidopsis thaliana]
          Length = 101

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = +2

Query: 2   NSIASRVSSTVFKRPSTELNSLSSQLNQWRGIRVRVFQNNLERALTFMQKQMTSSGVERL 181
           N+IA RV+  V  RPS     L+ QL Q RGIRV+VF N+L++ALT +QK+M SSG+ERL
Sbjct: 2   NTIAKRVTGLV-TRPS-----LNQQLQQERGIRVKVFSNDLDKALTILQKKMQSSGMERL 55

Query: 182 IKNEQTHHIKNSEKRVLARKNLERRLKSQDLA 277
           IK  QTHHIKNSEK+VLARKNLERR+KS D A
Sbjct: 56  IKGTQTHHIKNSEKKVLARKNLERRIKSIDFA 87


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