BLASTX nr result

ID: Cnidium21_contig00009227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009227
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33015.3| unnamed protein product [Vitis vinifera]              147   4e-33
ref|XP_003632453.1| PREDICTED: uncharacterized protein LOC100855...   146   6e-33
gb|AFK48596.1| unknown [Lotus japonicus]                              125   9e-27
gb|AFK47555.1| unknown [Lotus japonicus]                              125   9e-27
ref|NP_189267.4| Ribosomal protein S21 family protein [Arabidops...   124   3e-26

>emb|CBI33015.3| unnamed protein product [Vitis vinifera]
          Length = 106

 Score =  147 bits (370), Expect = 4e-33
 Identities = 73/98 (74%), Positives = 85/98 (86%)
 Frame = -1

Query: 822 STVFKRPSTELNSLSSQLNQWRGIRVRVFQNNLERALAFMQKQMTSSGVERLIKNEQTHH 643
           ST+F+ PS   NSLS +L QWRGIRV+VF  NLE AL  MQ++M SSG+ERLIK EQTHH
Sbjct: 9   STIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERLIKREQTHH 68

Query: 642 IKNSEKRVLARKNLERRLKSQDLARKLKSILMKKVRGM 529
           IKNSEKRVLARKNLERR++SQDLARKLK+IL+KKVRG+
Sbjct: 69  IKNSEKRVLARKNLERRIRSQDLARKLKAILIKKVRGL 106


>ref|XP_003632453.1| PREDICTED: uncharacterized protein LOC100855184 [Vitis vinifera]
          Length = 141

 Score =  146 bits (368), Expect = 6e-33
 Identities = 73/97 (75%), Positives = 84/97 (86%)
 Frame = -1

Query: 822 STVFKRPSTELNSLSSQLNQWRGIRVRVFQNNLERALAFMQKQMTSSGVERLIKNEQTHH 643
           ST+F+ PS   NSLS +L QWRGIRV+VF  NLE AL  MQ++M SSG+ERLIK EQTHH
Sbjct: 9   STIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERLIKREQTHH 68

Query: 642 IKNSEKRVLARKNLERRLKSQDLARKLKSILMKKVRG 532
           IKNSEKRVLARKNLERR++SQDLARKLK+IL+KKVRG
Sbjct: 69  IKNSEKRVLARKNLERRIRSQDLARKLKAILIKKVRG 105


>gb|AFK48596.1| unknown [Lotus japonicus]
          Length = 112

 Score =  125 bits (315), Expect = 9e-27
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = -1

Query: 774 QLNQWRGIRVRVFQNNLERALAFMQKQMTSSGVERLIKNEQTHHIKNSEKRVLARKNLER 595
           QL Q RGIRVRVF  NLE ALA MQ++MTSSG+ER+IK EQ  HIKNSEKRVLARKNLER
Sbjct: 31  QLQQCRGIRVRVFNGNLESALALMQRKMTSSGIERMIKKEQRFHIKNSEKRVLARKNLER 90

Query: 594 RLKSQDLARKLKSILMKKVRGM 529
           RL+S+DLARKLK+I++KKVRG+
Sbjct: 91  RLRSEDLARKLKAIMIKKVRGL 112


>gb|AFK47555.1| unknown [Lotus japonicus]
          Length = 112

 Score =  125 bits (315), Expect = 9e-27
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = -1

Query: 774 QLNQWRGIRVRVFQNNLERALAFMQKQMTSSGVERLIKNEQTHHIKNSEKRVLARKNLER 595
           QL Q RGIRVRVF  NLE ALA MQ++MTSSG+ER+IK EQ  HIKNSEKRVLARKNLER
Sbjct: 31  QLQQCRGIRVRVFNGNLESALALMQRKMTSSGIERMIKKEQRFHIKNSEKRVLARKNLER 90

Query: 594 RLKSQDLARKLKSILMKKVRGM 529
           RL+S+DLARKLK+I++KKVRG+
Sbjct: 91  RLRSEDLARKLKAIMIKKVRGL 112


>ref|NP_189267.4| Ribosomal protein S21 family protein [Arabidopsis thaliana]
           gi|332643628|gb|AEE77149.1| Ribosomal protein S21 family
           protein [Arabidopsis thaliana]
          Length = 101

 Score =  124 bits (310), Expect = 3e-26
 Identities = 62/86 (72%), Positives = 75/86 (87%)
 Frame = -1

Query: 786 SLSSQLNQWRGIRVRVFQNNLERALAFMQKQMTSSGVERLIKNEQTHHIKNSEKRVLARK 607
           SL+ QL Q RGIRV+VF N+L++AL  +QK+M SSG+ERLIK  QTHHIKNSEK+VLARK
Sbjct: 16  SLNQQLQQERGIRVKVFSNDLDKALTILQKKMQSSGMERLIKGTQTHHIKNSEKKVLARK 75

Query: 606 NLERRLKSQDLARKLKSILMKKVRGM 529
           NLERR+KS D ARKL+SIL+KKVRG+
Sbjct: 76  NLERRIKSIDFARKLQSILIKKVRGL 101


Top