BLASTX nr result
ID: Cnidium21_contig00009226
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00009226 (724 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof... 50 6e-09 ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof... 50 7e-09 emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] 50 7e-09 ref|XP_002321813.1| predicted protein [Populus trichocarpa] gi|2... 47 3e-07 ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|2... 46 4e-07 >ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera] gi|297737964|emb|CBI27165.3| unnamed protein product [Vitis vinifera] Length = 173 Score = 50.4 bits (119), Expect(2) = 6e-09 Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Frame = +2 Query: 104 LKLTKIDTDE-IYRVTYFGEGRMPVRSP*F*MF*VILGILDES*HPIPLSTFSRGLVWIV 280 L+ +DT+E IYRVTY+G+GRMP G Sbjct: 104 LQRNGVDTEEEIYRVTYYGKGRMP------------------------------GFGENC 133 Query: 281 NQRGQCTFGARLQEDELDF*RSL*SPWLLRVGPNIEISGD 400 RGQCTFGARLQE+E+ + PN+EISGD Sbjct: 134 TPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 173 Score = 35.8 bits (81), Expect(2) = 6e-09 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = +3 Query: 9 GGNIIQPGAKLFLKDLQ 59 GGNIIQPGA LFLKDLQ Sbjct: 89 GGNIIQPGATLFLKDLQ 105 >ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera] Length = 167 Score = 50.4 bits (119), Expect(2) = 7e-09 Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Frame = +2 Query: 104 LKLTKIDTDE-IYRVTYFGEGRMPVRSP*F*MF*VILGILDES*HPIPLSTFSRGLVWIV 280 L+ +DT+E IYRVTY+G+GRMP G Sbjct: 98 LQRNGVDTEEEIYRVTYYGKGRMP------------------------------GFGENC 127 Query: 281 NQRGQCTFGARLQEDELDF*RSL*SPWLLRVGPNIEISGD 400 RGQCTFGARLQE+E+ + PN+EISGD Sbjct: 128 TPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 167 Score = 35.8 bits (81), Expect(2) = 7e-09 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = +3 Query: 9 GGNIIQPGAKLFLKDLQ 59 GGNIIQPGA LFLKDLQ Sbjct: 83 GGNIIQPGATLFLKDLQ 99 >emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] Length = 125 Score = 50.4 bits (119), Expect(2) = 7e-09 Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Frame = +2 Query: 104 LKLTKIDTDE-IYRVTYFGEGRMPVRSP*F*MF*VILGILDES*HPIPLSTFSRGLVWIV 280 L+ +DT+E IYRVTY+G+GRMP G Sbjct: 56 LQRNGVDTEEEIYRVTYYGKGRMP------------------------------GFGENC 85 Query: 281 NQRGQCTFGARLQEDELDF*RSL*SPWLLRVGPNIEISGD 400 RGQCTFGARLQE+E+ + PN+EISGD Sbjct: 86 TPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 125 Score = 35.8 bits (81), Expect(2) = 7e-09 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = +3 Query: 9 GGNIIQPGAKLFLKDLQ 59 GGNIIQPGA LFLKDLQ Sbjct: 41 GGNIIQPGATLFLKDLQ 57 >ref|XP_002321813.1| predicted protein [Populus trichocarpa] gi|222868809|gb|EEF05940.1| predicted protein [Populus trichocarpa] Length = 110 Score = 47.0 bits (110), Expect(2) = 3e-07 Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +2 Query: 104 LKLTKIDTDE-IYRVTYFGEGRMPVRSP*F*MF*VILGILDES*HPIPLSTFSRGLVWIV 280 L+ +DT+E IYR+TYFG+GRMP G Sbjct: 41 LQRNGVDTEEEIYRITYFGKGRMP------------------------------GFGESC 70 Query: 281 NQRGQCTFGARLQEDELDF*RSL*SPWLLRVGPNIEISGD 400 RGQCTFG RLQ++E+ + PNIEIS D Sbjct: 71 TPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIEISQD 110 Score = 33.9 bits (76), Expect(2) = 3e-07 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = +3 Query: 9 GGNIIQPGAKLFLKDLQ 59 GGNIIQPGA LF KDLQ Sbjct: 26 GGNIIQPGATLFTKDLQ 42 >ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|222835556|gb|EEE73991.1| predicted protein [Populus trichocarpa] Length = 159 Score = 46.2 bits (108), Expect(2) = 4e-07 Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +2 Query: 104 LKLTKIDTDE-IYRVTYFGEGRMPVRSP*F*MF*VILGILDES*HPIPLSTFSRGLVWIV 280 L+ +DT+E IYR+TYFG+GRMP G Sbjct: 90 LQRNGVDTEEEIYRMTYFGKGRMP------------------------------GFGESC 119 Query: 281 NQRGQCTFGARLQEDELDF*RSL*SPWLLRVGPNIEISGD 400 RGQCTFG RLQ++E+ + PNIEIS D Sbjct: 120 TPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIEISQD 159 Score = 33.9 bits (76), Expect(2) = 4e-07 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = +3 Query: 9 GGNIIQPGAKLFLKDLQ 59 GGNIIQPGA LF KDLQ Sbjct: 75 GGNIIQPGATLFTKDLQ 91