BLASTX nr result

ID: Cnidium21_contig00009219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009219
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633653.1| PREDICTED: DNA-damage-repair/toleration prot...   417   e-114
ref|XP_002277284.1| PREDICTED: DNA-damage-repair/toleration prot...   417   e-114
emb|CAN65782.1| hypothetical protein VITISV_010562 [Vitis vinifera]   417   e-114
ref|XP_002328509.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|NP_566241.1| DNA-damage-repair/toleration protein DRT102 [Ar...   404   e-110

>ref|XP_003633653.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like isoform 2
            [Vitis vinifera]
          Length = 312

 Score =  417 bits (1073), Expect = e-114
 Identities = 198/276 (71%), Positives = 238/276 (86%)
 Frame = +3

Query: 261  LVNHLRSLNIDVEDLGTDKYYSVGSKIGSLVSSASGDTSVETRGLLACGTGVGVSIFANK 440
            LV+HL+SLNI+VED+GTD YYSV ++IG  VSS+  DT    RGLLACGTGVGV++FANK
Sbjct: 27   LVSHLKSLNIEVEDVGTDSYYSVAAEIGRRVSSSPEDT----RGLLACGTGVGVAMFANK 82

Query: 441  FPGVYAATCTSLAEAQNCRSINNSNVLSLSGMSTSPEVAIEILSTWLNTPFKSPCPASNS 620
            FPGV+AATC S A+A N RSINNSNVL++SGMST+PE A+EIL TWL TPFKSPCPAS  
Sbjct: 83   FPGVFAATCLSAADALNARSINNSNVLAVSGMSTAPESAVEILDTWLKTPFKSPCPASEF 142

Query: 621  EPWPNEIESFLDNSISEMSQIGSNIDKLNESSCVICDLVKTREFVPVEMIPGGSMKIVRE 800
            +PWP EIESFLDNS+SEMS+IGS   K ++S C IC LVK RE  P+++IPGGSMKI+RE
Sbjct: 143  KPWPKEIESFLDNSVSEMSKIGSEKTKTSDS-CSICCLVKNRELNPIDIIPGGSMKILRE 201

Query: 801  NPTSAIIRFKAGSVEPAHHHTFGHDLLVIKGSKRVWNLSKKEKYDLGAGDFLFTPAGDVH 980
            +PTSA++RF+AGSVEPAHHHTFGHDL+V+KG K VWNL+KKE++DL  GD+L+TPAGDVH
Sbjct: 202  SPTSAVVRFEAGSVEPAHHHTFGHDLVVMKGKKSVWNLTKKERFDLIVGDYLYTPAGDVH 261

Query: 981  RVKYFEDTEFFLRWDGHWDIFLDEDLDTARSALEKE 1088
            RVKY+EDTEFF++WDGHWD+F DEDL TA+ A EKE
Sbjct: 262  RVKYYEDTEFFIKWDGHWDMFFDEDLATAKEAAEKE 297


>ref|XP_002277284.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like isoform 1
            [Vitis vinifera]
          Length = 300

 Score =  417 bits (1073), Expect = e-114
 Identities = 198/276 (71%), Positives = 238/276 (86%)
 Frame = +3

Query: 261  LVNHLRSLNIDVEDLGTDKYYSVGSKIGSLVSSASGDTSVETRGLLACGTGVGVSIFANK 440
            LV+HL+SLNI+VED+GTD YYSV ++IG  VSS+  DT    RGLLACGTGVGV++FANK
Sbjct: 27   LVSHLKSLNIEVEDVGTDSYYSVAAEIGRRVSSSPEDT----RGLLACGTGVGVAMFANK 82

Query: 441  FPGVYAATCTSLAEAQNCRSINNSNVLSLSGMSTSPEVAIEILSTWLNTPFKSPCPASNS 620
            FPGV+AATC S A+A N RSINNSNVL++SGMST+PE A+EIL TWL TPFKSPCPAS  
Sbjct: 83   FPGVFAATCLSAADALNARSINNSNVLAVSGMSTAPESAVEILDTWLKTPFKSPCPASEF 142

Query: 621  EPWPNEIESFLDNSISEMSQIGSNIDKLNESSCVICDLVKTREFVPVEMIPGGSMKIVRE 800
            +PWP EIESFLDNS+SEMS+IGS   K ++S C IC LVK RE  P+++IPGGSMKI+RE
Sbjct: 143  KPWPKEIESFLDNSVSEMSKIGSEKTKTSDS-CSICCLVKNRELNPIDIIPGGSMKILRE 201

Query: 801  NPTSAIIRFKAGSVEPAHHHTFGHDLLVIKGSKRVWNLSKKEKYDLGAGDFLFTPAGDVH 980
            +PTSA++RF+AGSVEPAHHHTFGHDL+V+KG K VWNL+KKE++DL  GD+L+TPAGDVH
Sbjct: 202  SPTSAVVRFEAGSVEPAHHHTFGHDLVVMKGKKSVWNLTKKERFDLIVGDYLYTPAGDVH 261

Query: 981  RVKYFEDTEFFLRWDGHWDIFLDEDLDTARSALEKE 1088
            RVKY+EDTEFF++WDGHWD+F DEDL TA+ A EKE
Sbjct: 262  RVKYYEDTEFFIKWDGHWDMFFDEDLATAKEAAEKE 297


>emb|CAN65782.1| hypothetical protein VITISV_010562 [Vitis vinifera]
          Length = 316

 Score =  417 bits (1073), Expect = e-114
 Identities = 198/276 (71%), Positives = 238/276 (86%)
 Frame = +3

Query: 261  LVNHLRSLNIDVEDLGTDKYYSVGSKIGSLVSSASGDTSVETRGLLACGTGVGVSIFANK 440
            LV+HL+SLNI+VED+GTD YYSV ++IG  VSS+  DT    RGLLACGTGVGV++FANK
Sbjct: 27   LVSHLKSLNIEVEDVGTDSYYSVAAEIGRRVSSSPEDT----RGLLACGTGVGVAMFANK 82

Query: 441  FPGVYAATCTSLAEAQNCRSINNSNVLSLSGMSTSPEVAIEILSTWLNTPFKSPCPASNS 620
            FPGV+AATC S A+A N RSINNSNVL++SGMST+PE A+EIL TWL TPFKSPCPAS  
Sbjct: 83   FPGVFAATCLSAADALNARSINNSNVLAVSGMSTAPESAVEILDTWLKTPFKSPCPASEF 142

Query: 621  EPWPNEIESFLDNSISEMSQIGSNIDKLNESSCVICDLVKTREFVPVEMIPGGSMKIVRE 800
            +PWP EIESFLDNS+SEMS+IGS   K ++S C IC LVK RE  P+++IPGGSMKI+RE
Sbjct: 143  KPWPKEIESFLDNSVSEMSKIGSEKTKTSDS-CSICCLVKNRELNPIDIIPGGSMKILRE 201

Query: 801  NPTSAIIRFKAGSVEPAHHHTFGHDLLVIKGSKRVWNLSKKEKYDLGAGDFLFTPAGDVH 980
            +PTSA++RF+AGSVEPAHHHTFGHDL+V+KG K VWNL+KKE++DL  GD+L+TPAGDVH
Sbjct: 202  SPTSAVVRFEAGSVEPAHHHTFGHDLVVMKGKKSVWNLTKKERFDLIVGDYLYTPAGDVH 261

Query: 981  RVKYFEDTEFFLRWDGHWDIFLDEDLDTARSALEKE 1088
            RVKY+EDTEFF++WDGHWD+F DEDL TA+ A EKE
Sbjct: 262  RVKYYEDTEFFIKWDGHWDMFFDEDLATAKEAAEKE 297


>ref|XP_002328509.1| predicted protein [Populus trichocarpa] gi|222838224|gb|EEE76589.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  416 bits (1069), Expect = e-114
 Identities = 200/287 (69%), Positives = 238/287 (82%), Gaps = 11/287 (3%)
 Frame = +3

Query: 261  LVNHLRSLNIDVEDLGTDKYYSVGSKIGSLVSSASGDTSVET---RGLLACGTGVGVSIF 431
            LV+HLRSLNI+VEDLGT  YYS+ +++G LVS+AS   S  T   RGL+ACGTGVGVSIF
Sbjct: 38   LVSHLRSLNIEVEDLGTSSYYSIAAEVGRLVSAASTTPSSPTPEIRGLVACGTGVGVSIF 97

Query: 432  ANKFPGVYAATCTSLAEAQNCRSINNSNVLSLSGMSTSPEVAIEILSTWLNTPFKSPCPA 611
            ANKFPGV+AATC S A+A N RSINNSNVL++SGM+TSP+ AIEIL TWL TPFKSPCPA
Sbjct: 98   ANKFPGVFAATCLSTADAANSRSINNSNVLAVSGMATSPDSAIEILDTWLKTPFKSPCPA 157

Query: 612  SNSEPWPNEIESFLDNSISEMSQIGSNID--------KLNESSCVICDLVKTREFVPVEM 767
            SNS PW  EIESFLDNS+SEM  IG+ +          +N S+C +C LVK R+  P+E+
Sbjct: 158  SNSAPWGEEIESFLDNSLSEMPVIGAKLSDPKQQEEGSINTSACALCCLVKNRKLDPIEI 217

Query: 768  IPGGSMKIVRENPTSAIIRFKAGSVEPAHHHTFGHDLLVIKGSKRVWNLSKKEKYDLGAG 947
            IPGG+MKIVRE+PTSAI+ FKAGSVEPAHHHTFGHDL+V+KGSKRVWN+SKK KYDL  G
Sbjct: 218  IPGGAMKIVRESPTSAIVSFKAGSVEPAHHHTFGHDLVVLKGSKRVWNMSKKAKYDLVVG 277

Query: 948  DFLFTPAGDVHRVKYFEDTEFFLRWDGHWDIFLDEDLDTARSALEKE 1088
            D+LFTPAGDVHRVKYFEDTEFF++W+G WDIF DE+++ A+S +EKE
Sbjct: 278  DYLFTPAGDVHRVKYFEDTEFFIKWEGKWDIFFDEEMEVAKSEIEKE 324


>ref|NP_566241.1| DNA-damage-repair/toleration protein DRT102 [Arabidopsis thaliana]
            gi|148872800|sp|Q05212.2|DR102_ARATH RecName:
            Full=DNA-damage-repair/toleration protein DRT102
            gi|15529165|gb|AAK97677.1| AT3g04880/T9J14_17
            [Arabidopsis thaliana] gi|23505883|gb|AAN28801.1|
            At3g04880/T9J14_17 [Arabidopsis thaliana]
            gi|332640629|gb|AEE74150.1| DNA-damage-repair/toleration
            protein DRT102 [Arabidopsis thaliana]
          Length = 310

 Score =  404 bits (1038), Expect = e-110
 Identities = 197/284 (69%), Positives = 229/284 (80%), Gaps = 8/284 (2%)
 Frame = +3

Query: 261  LVNHLRSLNIDVEDLGTDKYYSVGSKIGSLVSSASGDTSVETRGLLACGTGVGVSIFANK 440
            +V HLRSL IDVED G   YYS GS++G  VS++S   S E RGL+ CGTGVGV++FANK
Sbjct: 29   MVTHLRSLGIDVEDTGVSSYYSAGSEVGRRVSASS---SSEVRGLVCCGTGVGVAMFANK 85

Query: 441  FPGVYAATCTSLAEAQNCRSINNSNVLSLSGMSTSPEVAIEILSTWLNTPFKSPCPASNS 620
            FPGVYAATC S+ +A N RSI+N NVL+ SG+ TSPE A+EI   W+ TPFKSPCPAS S
Sbjct: 86   FPGVYAATCLSVEDAVNARSISNCNVLAFSGIKTSPETALEIFDAWIKTPFKSPCPASGS 145

Query: 621  EPWPNEIESFLDNSISEMSQIG------SNIDKLNES--SCVICDLVKTREFVPVEMIPG 776
            EPW + I SFLDNS+SEMSQIG      S   K++E+  SCVIC L K REF PV+++PG
Sbjct: 146  EPWSSVISSFLDNSLSEMSQIGKSTAGDSTTKKIDETTASCVICCLAKNREFTPVDIMPG 205

Query: 777  GSMKIVRENPTSAIIRFKAGSVEPAHHHTFGHDLLVIKGSKRVWNLSKKEKYDLGAGDFL 956
            GSMKIVRE PTSAI+RFKAGSVEPAHHHTFGHDL+VIKG K VWNLSKKE+ DL  GD+L
Sbjct: 206  GSMKIVRETPTSAIVRFKAGSVEPAHHHTFGHDLVVIKGKKSVWNLSKKERADLVDGDYL 265

Query: 957  FTPAGDVHRVKYFEDTEFFLRWDGHWDIFLDEDLDTARSALEKE 1088
            FTPAGDVHRVKY EDTEFF+ WDGHWDIFLDEDL+TA+ A+E+E
Sbjct: 266  FTPAGDVHRVKYHEDTEFFITWDGHWDIFLDEDLETAKKAIEEE 309


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