BLASTX nr result

ID: Cnidium21_contig00009191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009191
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88
ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   327   1e-87
ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig...   324   1e-86
ref|NP_680156.2| regulator of chromosome condensation repeat-con...   317   2e-84
ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arab...   314   1e-83

>ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  330 bits (846), Expect = 2e-88
 Identities = 150/205 (73%), Positives = 176/205 (85%)
 Frame = -1

Query: 660 IFGFLRSSSEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESK 481
           + GF RSSSEYTPR IKKLEGVKVK++AAG++HSAC+DENGSV+IFGE +V KL F ++ 
Sbjct: 211 LLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDAN 270

Query: 480 VATTPSAINKVPHSDEVACGGYHTCVITNGGELFTWGTNENGCLGIGRRDVAHLPERVEG 301
            ATTPS I K+P+S EVACGGYHTCVIT+GGEL+TWG+NENGCLG G  DV H+PERVEG
Sbjct: 271 NATTPSMIGKLPYSQEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIPERVEG 330

Query: 300 PLVKNPVWKVSCGWKHTAAISGGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPM 121
           P +++PV KVSCGWKHTAAIS GN+FTWGWGGSHGTFS DG SSGGQLG GDD DY+ P 
Sbjct: 331 PFLRSPVEKVSCGWKHTAAISEGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPT 390

Query: 120 MISFGNNVKALQVSCGFNHTAAILE 46
           +++F   +KAL+VSCGFNHT AILE
Sbjct: 391 LVAFEKKMKALEVSCGFNHTGAILE 415



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
 Frame = -1

Query: 654 GFLRSSSEYTPRLIKK--LEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESK 481
           G+    S + P+L+         +KS++ G  H+  + E G V+  G     +LG   + 
Sbjct: 44  GYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNT 103

Query: 480 V-ATTPSAINKVPHSD-EVACGGYHTCVITNGGELFTWGTNENGCLGIGRR--DVAHLPE 313
                P  ++ +     +++ G +H+C IT  GEL+TWG N NG LG+G++  +V  +P 
Sbjct: 104 TYCMEPLEVSGLKKEIVQISAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPT 163

Query: 312 RVEGPLVKNPVWKVSCGWKHTAAIS-GGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDID 136
           +VE  L    +  V+   +H+ A++ GG   +WG GGS G     GH S   LG      
Sbjct: 164 KVE-CLSGINIKMVALASEHSIAVTDGGQALSWGGGGS-GRLG-HGHQS-SLLGFFRSSS 219

Query: 135 YIEPMMISFGNNVKALQVSCGFNHTAAILE 46
              P  I     VK   ++ G  H+A I E
Sbjct: 220 EYTPRHIKKLEGVKVKNIAAGLLHSACIDE 249


>ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
           gi|296082630|emb|CBI21635.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  327 bits (839), Expect = 1e-87
 Identities = 145/207 (70%), Positives = 178/207 (85%)
 Frame = -1

Query: 660 IFGFLRSSSEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESK 481
           + GF R+SSEY PRLI++LEG+KVK+VAAG++HSAC+DENGSVFIFGE ++ K GF E+K
Sbjct: 212 LLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAK 271

Query: 480 VATTPSAINKVPHSDEVACGGYHTCVITNGGELFTWGTNENGCLGIGRRDVAHLPERVEG 301
            AT PS I+++P+S +VACGGYHTCVI++ GELFTWG+NENGCLG+G  +  H PER+EG
Sbjct: 272 NATAPSMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEG 331

Query: 300 PLVKNPVWKVSCGWKHTAAISGGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPM 121
           P  KNPV +VSCGWKHTAAIS GN+FTWGWGGS+GTFS DGHSSGGQLG G D+D+I+P 
Sbjct: 332 PFSKNPVSQVSCGWKHTAAISEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPK 391

Query: 120 MISFGNNVKALQVSCGFNHTAAILEYL 40
           M+ F  +V+ALQVSCGFNHT AILEY+
Sbjct: 392 MVEFEESVRALQVSCGFNHTGAILEYI 418



 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
 Frame = -1

Query: 636 SEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESKVATT-PSA 460
           S++ P +    +   + ++A G  H+  + E+G V+  G     +LG    K  TT P  
Sbjct: 53  SQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLE 112

Query: 459 INKVPHSD-EVACGGYHTCVITNGGELFTWGTNENGCLGIGRR--DVAHLPERVEGPLVK 289
           ++ +P     +A G YH+  IT  GEL+ WG N NG LG+G++  +   +P +VE  L  
Sbjct: 113 VSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVE-CLNG 171

Query: 288 NPVWKVSCGWKHT-AAISGGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPMMIS 112
             +  V+ G +H+ AA   G   +WG GGS G     GH S   LG         P +I 
Sbjct: 172 ISIKMVALGSEHSVAATDQGEALSWGAGGS-GRLG-HGHES-SLLGFFRTSSEYRPRLIR 228

Query: 111 FGNNVKALQVSCGFNHTAAILE 46
               +K   V+ G  H+A I E
Sbjct: 229 RLEGIKVKNVAAGLLHSACIDE 250


>ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  324 bits (830), Expect = 1e-86
 Identities = 147/204 (72%), Positives = 173/204 (84%)
 Frame = -1

Query: 654 GFLRSSSEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESKVA 475
           GFL+S+SE+TPRLIK+LEG+KVK VAAGM+HSACVDENG+V+IFGE +  ++ F E+  A
Sbjct: 277 GFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKA 336

Query: 474 TTPSAINKVPHSDEVACGGYHTCVITNGGELFTWGTNENGCLGIGRRDVAHLPERVEGPL 295
           TTPS I+ +   +EVACGGYHTCV+T GG+L++WG+NENGCLG G   V+HLPERVEGP 
Sbjct: 337 TTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPF 396

Query: 294 VKNPVWKVSCGWKHTAAISGGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPMMI 115
            K+PV KVSCGWKHTAAISGG IFTWGWGGSHGTFSVDGHSSGGQLG G D+DY++P  I
Sbjct: 397 SKSPVSKVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKI 456

Query: 114 SFGNNVKALQVSCGFNHTAAILEY 43
             G NVK +QVSCGFNHT AILEY
Sbjct: 457 DLGENVKVVQVSCGFNHTGAILEY 480



 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
 Frame = -1

Query: 636 SEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGF-EESKVATTPSA 460
           S+++P      +   +K +A G  H+  + E+G V+  G  +  +LG  +E + +T P  
Sbjct: 117 SQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEPVE 176

Query: 459 INKVPHSDEVACGGYHTCVITNGGELFTWGTNENGCLGIGRRD--VAHLPERV---EGPL 295
           +     +  ++ G  H+CV+T  GEL+ WG N NG LG+G++     HLP +V   +G +
Sbjct: 177 VRIPKEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIV 236

Query: 294 VKNPVWKVSCGWKHTAAIS-GGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYI---- 130
           +K    + + G  H+ A++ GG +F+WG          DG S  G+LG G +  ++    
Sbjct: 237 IK----RAALGSDHSIAVADGGEVFSWG----------DGRS--GRLGHGHESTFLGFLK 280

Query: 129 -----EPMMISFGNNVKALQVSCGFNHTAAILE 46
                 P +I     +K   V+ G  H+A + E
Sbjct: 281 STSEHTPRLIKELEGIKVKHVAAGMLHSACVDE 313


>ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|26452773|dbj|BAC43467.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973187|gb|AAO63918.1| putative UVB-resistance
           protein UVR8 [Arabidopsis thaliana]
           gi|332003957|gb|AED91340.1| regulator of chromosome
           condensation repeat-containing protein [Arabidopsis
           thaliana]
          Length = 434

 Score =  317 bits (812), Expect = 2e-84
 Identities = 140/206 (67%), Positives = 173/206 (83%)
 Frame = -1

Query: 660 IFGFLRSSSEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESK 481
           +FG LRS+SE+TPRLIK+LEG+KV +VAAG++HSAC DENGS F+FGE S+ K+GF   +
Sbjct: 228 LFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVR 287

Query: 480 VATTPSAINKVPHSDEVACGGYHTCVITNGGELFTWGTNENGCLGIGRRDVAHLPERVEG 301
            ATTPS I++VP+++EVACGGYHTCV+T GGEL+TWG+NENGCLG     V+H P RVEG
Sbjct: 288 NATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEG 347

Query: 300 PLVKNPVWKVSCGWKHTAAISGGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPM 121
           P +++ V +VSCGWKHTAAIS  N+FTWGWGGSHGTFSVDGHSSGGQLG G D+DY  P 
Sbjct: 348 PFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPA 407

Query: 120 MISFGNNVKALQVSCGFNHTAAILEY 43
           M+  G NV+A+ +SCGFNHTAA+LE+
Sbjct: 408 MVDLGKNVRAVHISCGFNHTAAVLEH 433



 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
 Frame = -1

Query: 636 SEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESKV-ATTPSA 460
           S++TP +   L    + +VA G  H+  + E   VF  G     +LG  + K  A  P  
Sbjct: 69  SQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLE 128

Query: 459 INKVPHSD-EVACGGYHTCVITNGGELFTWGTNENGCLGIGRR--DVAHLPERVEGPLVK 289
           ++ +      ++ G YH+  IT  GEL+ WG N +G LG+G++   V  +P +VE  L  
Sbjct: 129 VSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEA-LHG 187

Query: 288 NPVWKVSCGWKHTAAIS-GGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPMMIS 112
             +  V+ G +H+ A++ GG + +WG GGS G     GH S    G+        P +I 
Sbjct: 188 ITIQSVALGSEHSVAVTDGGEVLSWGGGGS-GRLG-HGHQS-SLFGILRSNSEFTPRLIK 244

Query: 111 FGNNVKALQVSCGFNHTA 58
               +K   V+ G  H+A
Sbjct: 245 ELEGIKVTNVAAGLLHSA 262


>ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata] gi|297319215|gb|EFH49637.1| hypothetical protein
           ARALYDRAFT_487713 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  314 bits (805), Expect = 1e-83
 Identities = 139/206 (67%), Positives = 172/206 (83%)
 Frame = -1

Query: 660 IFGFLRSSSEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESK 481
           +FG LRS+SE+TPRLIK+LEG+KVK+VAAG++HSAC DENGS F+FGE S+ K+GF   +
Sbjct: 228 LFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFGERSINKMGFGGVR 287

Query: 480 VATTPSAINKVPHSDEVACGGYHTCVITNGGELFTWGTNENGCLGIGRRDVAHLPERVEG 301
            ATTPS I++VP+++ VACGGYHTCV+T GGEL+TWG+NENGCLG     V+H P RVEG
Sbjct: 288 NATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEG 347

Query: 300 PLVKNPVWKVSCGWKHTAAISGGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPM 121
           P +++ V +VSCGWKHTAAIS   +FTWGWGGSHGTFSVDGHSSGGQLG G D+DY  P 
Sbjct: 348 PFLESTVSQVSCGWKHTAAISDNKVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPA 407

Query: 120 MISFGNNVKALQVSCGFNHTAAILEY 43
           M+  G NV+A+ +SCGFNHTAA+LE+
Sbjct: 408 MVDLGKNVRAVHISCGFNHTAAVLEH 433



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
 Frame = -1

Query: 636 SEYTPRLIKKLEGVKVKSVAAGMMHSACVDENGSVFIFGEGSVKKLGFEESKV-ATTPSA 460
           S++TP     L    +++VA G  H+  + E   VF  G     +LG  + K  A  P  
Sbjct: 69  SQWTPAGCSALSDHSIRAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLE 128

Query: 459 INKVPHSD-EVACGGYHTCVITNGGELFTWGTNENGCLGIGRR--DVAHLPERVEGPLVK 289
           ++ +      ++ G YH+  IT  GEL+ WG N +G LG+G++   V  +P +VE  L  
Sbjct: 129 VSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEA-LHG 187

Query: 288 NPVWKVSCGWKHTAAIS-GGNIFTWGWGGSHGTFSVDGHSSGGQLGLGDDIDYIEPMMIS 112
             +  V+ G +H+ A++ GG + +WG GGS G     GH S    G+        P +I 
Sbjct: 188 ITIQSVALGSEHSVAVTDGGEVLSWGGGGS-GRLG-HGHQS-SLFGILRSNSEFTPRLIK 244

Query: 111 FGNNVKALQVSCGFNHTA 58
               +K   V+ G  H+A
Sbjct: 245 ELEGIKVKNVAAGLLHSA 262


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