BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009180
         (2226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi...   704   0.0  
ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|2...   684   0.0  
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm...   676   0.0  
ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi...   664   0.0  
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi...   658   0.0  

>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic [Vitis vinifera]
          Length = 511

 Score =  704 bits (1818), Expect = 0.0
 Identities = 368/531 (69%), Positives = 423/531 (79%), Gaps = 2/531 (0%)
 Frame = -3

Query: 1903 GFLAGIDHNSKLGFT--NSFYFPQYKFLGARFCTKLKTPNSCSRFSGTLCSLKTHNSVVL 1730
            GF + +   ++LGFT  +SF   + + +  +F         CSR + T+C+ +    VV 
Sbjct: 6    GFASSLMSPTELGFTLSSSFSIQRPRLIVPKFSRSF-LGEYCSRAT-TICNHQNPRFVVP 63

Query: 1729 NRGKVREFGFLKSVELDKFITSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSVR 1550
             R K+REF   KSVELD+F+TSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLS R
Sbjct: 64   KRDKIREFRLFKSVELDQFLTSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSAR 123

Query: 1549 ELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMVSLMCSWVKKLIEEXXXXXX 1370
            ELQLVLVYFSQEGRDSWCALEVF+WLRKENRVDKETMELMVS+MCSWVKKLIE       
Sbjct: 124  ELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEG------ 177

Query: 1369 XXXXXXXXXXVKKLIEEKNEXXXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMREKDGAV 1190
                             +++               LKP FSMIEKVISLY+EM EK+ AV
Sbjct: 178  -----------------EHDVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEEKEKAV 220

Query: 1189 LFVKEILRRGISYSDDDGQGPKGGPTGYLAWKMMEEGNYKDAIKLVIDFKESDLKPEVYS 1010
            LFVKE+LRR I+YS+DDG G KGGPTGYLAWKMM EGNY+ A+KLVI  +ES LKPEVYS
Sbjct: 221  LFVKEVLRREIAYSEDDGDGHKGGPTGYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYS 280

Query: 1009 YLIAMTAVVKELNELAKALRKLKSFRKAGLISELDGKNVQLIEEYQSDLIADGVRLSDWV 830
            YLIAMTAVVKELNE AKALRKLK F K+GLI+ELD +NV+LIE+YQSDL+ADGVRLS WV
Sbjct: 281  YLIAMTAVVKELNEFAKALRKLKGFTKSGLIAELDAENVELIEKYQSDLLADGVRLSSWV 340

Query: 829  IQQGGPSLQGVVLERLLAMYICAGQGLEAERQLWEMKLVGKEADGNLYDMVLAICASQNE 650
            IQ+G   L GVV ERLLAMYICAG+GLEAERQLWEMKLVGKEAD  LYD+VLAICAS+ E
Sbjct: 341  IQEGRSPLHGVVYERLLAMYICAGRGLEAERQLWEMKLVGKEADRELYDIVLAICASKKE 400

Query: 649  SNAISRLLTRVEATSSLRKKKTLSWLLRGYIKGGHYSDAAETVIKMLNLGLSPDFLDRAA 470
            ++AISRLLT +E TSS+R+KKTLSWLLRGYIKG H+ DA+ET+IKML+LGL P++LDRAA
Sbjct: 401  ASAISRLLTGMEVTSSIRRKKTLSWLLRGYIKGSHFDDASETIIKMLDLGLCPEYLDRAA 460

Query: 469  VLQGLRKRIQQSGNVETYLKLCKHLSDASLIGPCLVYMYLKRYKLWITKMI 317
            VLQGLR RIQQ+GNVETYLKLCKHLSDA+LIGPCLVY+Y+K+YKLWI K I
Sbjct: 461  VLQGLRNRIQQTGNVETYLKLCKHLSDANLIGPCLVYLYIKKYKLWILKTI 511


>ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|222850384|gb|EEE87931.1|
            predicted protein [Populus trichocarpa]
          Length = 500

 Score =  684 bits (1764), Expect = 0.0
 Identities = 346/507 (68%), Positives = 411/507 (81%), Gaps = 7/507 (1%)
 Frame = -3

Query: 1816 FCTKLKTPNSCSR----FSGTLCSLKTH---NSVVLNRGKVREFGFLKSVELDKFITSDD 1658
            F  K +  NSC +     S  +C+ +T    N VV    KVREF   KSVELD+++TSDD
Sbjct: 17   FSLKKRYWNSCMKPCCMVSTIICNYQTPKRPNFVVAKTTKVREFRLFKSVELDQYVTSDD 76

Query: 1657 EDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSVRELQLVLVYFSQEGRDSWCALEVFD 1478
            E+EM EGFFEAIEELERMTREPSD+LEEMNDRLS RELQLVLVYFSQEGRDSWCALEVF+
Sbjct: 77   EEEMGEGFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFE 136

Query: 1477 WLRKENRVDKETMELMVSLMCSWVKKLIEEXXXXXXXXXXXXXXXXVKKLIEEKNEXXXX 1298
            WLRKENRVDKETMELMVS+MCSWVKKLIE                        + +    
Sbjct: 137  WLRKENRVDKETMELMVSIMCSWVKKLIEG-----------------------EQDVGDV 173

Query: 1297 XXXXXXXXXXXLKPSFSMIEKVISLYFEMREKDGAVLFVKEILRRGISYSDDDGQGPKGG 1118
                       LKPSFSMIEKVISLY++M +K+GAV FVKE+LRRGI+YS DDG+G KGG
Sbjct: 174  VDLLVDMDCVGLKPSFSMIEKVISLYWDMGKKEGAVSFVKEVLRRGIAYSGDDGEGQKGG 233

Query: 1117 PTGYLAWKMMEEGNYKDAIKLVIDFKESDLKPEVYSYLIAMTAVVKELNELAKALRKLKS 938
            PTGYL WKMM +GNY++A+KLVI  +ES LKPE+Y+YLIAMTAVVKELNE +KALRKLK 
Sbjct: 234  PTGYLTWKMMVDGNYRNAVKLVIHLRESGLKPEIYAYLIAMTAVVKELNEFSKALRKLKG 293

Query: 937  FRKAGLISELDGKNVQLIEEYQSDLIADGVRLSDWVIQQGGPSLQGVVLERLLAMYICAG 758
            + ++G+++ELD +NV+L+E+YQSDL+ADGV LS WVIQ+G P+L GVV ERLLAMYICAG
Sbjct: 294  YSRSGMVTELDAENVELVEKYQSDLLADGVCLSSWVIQEGSPALYGVVHERLLAMYICAG 353

Query: 757  QGLEAERQLWEMKLVGKEADGNLYDMVLAICASQNESNAISRLLTRVEATSSLRKKKTLS 578
            +GL+AERQLWEMKLVGKEADG+LYD+VLAICASQ E++A++RLLTR+E  SS+RKKK+LS
Sbjct: 354  RGLDAERQLWEMKLVGKEADGDLYDIVLAICASQKEASAVARLLTRIEVASSMRKKKSLS 413

Query: 577  WLLRGYIKGGHYSDAAETVIKMLNLGLSPDFLDRAAVLQGLRKRIQQSGNVETYLKLCKH 398
            WLLRGYIKGGHY +AAET+IKML+LGLSPD+LDR AV+QGLRKRIQQ GNVE+YLKLCK 
Sbjct: 414  WLLRGYIKGGHYGEAAETLIKMLDLGLSPDYLDRVAVMQGLRKRIQQWGNVESYLKLCKR 473

Query: 397  LSDASLIGPCLVYMYLKRYKLWITKMI 317
            LSD +LIGP LVY+Y+K+YKLWI K++
Sbjct: 474  LSDVNLIGPSLVYLYIKKYKLWIMKLL 500


>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
            gi|223539607|gb|EEF41193.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 499

 Score =  676 bits (1745), Expect = 0.0
 Identities = 353/512 (68%), Positives = 407/512 (79%), Gaps = 4/512 (0%)
 Frame = -3

Query: 1840 QYKFLGARF--CTKLKTPNSCSRFSGTLCSLKTHNSVVLNRGKVR--EFGFLKSVELDKF 1673
            +YK L  RF   + +K P             K+ N VV  + K R  EF  LKSVELD++
Sbjct: 24   RYKLLNPRFFQLSSIKFP-------------KSSNFVVAQQSKSRNREFRVLKSVELDQY 70

Query: 1672 ITSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSVRELQLVLVYFSQEGRDSWCA 1493
            I SDDE+EMSEGFFEAIEELERMTREPSDVLEEMND+LS RELQLVLVYFSQEGRDSWCA
Sbjct: 71   IASDDEEEMSEGFFEAIEELERMTREPSDVLEEMNDKLSARELQLVLVYFSQEGRDSWCA 130

Query: 1492 LEVFDWLRKENRVDKETMELMVSLMCSWVKKLIEEXXXXXXXXXXXXXXXXVKKLIEEKN 1313
            LEVF+WLRKENRVDKETMELMVS+MCSW+KKLIE                        ++
Sbjct: 131  LEVFEWLRKENRVDKETMELMVSIMCSWIKKLIEG-----------------------EH 167

Query: 1312 EXXXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMREKDGAVLFVKEILRRGISYSDDDGQ 1133
            E               LKPSFSMIEKVISLY+E+ EK+ +V FVKE+LRR ++Y +DDG+
Sbjct: 168  EIGDVVDLLVDMDCVGLKPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRREVAYFEDDGE 227

Query: 1132 GPKGGPTGYLAWKMMEEGNYKDAIKLVIDFKESDLKPEVYSYLIAMTAVVKELNELAKAL 953
            G KGGPTGYLAWKMM +GNY+DA+KLVI F+ES LKPEVYSYLIAMTAVVKELNE AKAL
Sbjct: 228  GQKGGPTGYLAWKMMVDGNYRDAVKLVIHFRESGLKPEVYSYLIAMTAVVKELNEFAKAL 287

Query: 952  RKLKSFRKAGLISELDGKNVQLIEEYQSDLIADGVRLSDWVIQQGGPSLQGVVLERLLAM 773
            RKLK F K+GLI+ELD +N +LIE+YQSDLIADGV LS WVIQ+G PSL GVV ERLLAM
Sbjct: 288  RKLKGFAKSGLIAELDAENTRLIEKYQSDLIADGVCLSSWVIQEGSPSLYGVVHERLLAM 347

Query: 772  YICAGQGLEAERQLWEMKLVGKEADGNLYDMVLAICASQNESNAISRLLTRVEATSSLRK 593
            YICAG+GL+AERQLWEMKLVGK ADG+LYD+VLAICASQ E++A+SRLLTRVE TSSL+K
Sbjct: 348  YICAGRGLDAERQLWEMKLVGKHADGDLYDIVLAICASQKEASAVSRLLTRVEVTSSLQK 407

Query: 592  KKTLSWLLRGYIKGGHYSDAAETVIKMLNLGLSPDFLDRAAVLQGLRKRIQQSGNVETYL 413
            KKTLSWLLRGY+KGG Y +AAE ++KML++GL PD+LDR AVLQGLRKRIQQ GNVE+YL
Sbjct: 408  KKTLSWLLRGYLKGGQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQWGNVESYL 467

Query: 412  KLCKHLSDASLIGPCLVYMYLKRYKLWITKMI 317
             LCK LSD +LIGP LVY+Y+K+YKLWI KM+
Sbjct: 468  NLCKRLSDENLIGPSLVYLYIKKYKLWIMKML 499


>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic-like [Glycine max]
          Length = 510

 Score =  664 bits (1712), Expect = 0.0
 Identities = 347/533 (65%), Positives = 413/533 (77%), Gaps = 3/533 (0%)
 Frame = -3

Query: 1906 MGFLAGIDHNSKLGFTNSFYFPQYKFLGARFCTKLKTPNSCSRFSGTLC--SLKTHNSVV 1733
            M +  G     KLGF  S   P  K     F        S   + G L   S K  N   
Sbjct: 1    MAYAHGFAPIFKLGFVFSSVSPSQKRHPLVFPAS-HCGYSLKFYDGVLSARSCKFKNPSF 59

Query: 1732 LNRGKVREFGFLKSVELDKFITSDDE-DEMSEGFFEAIEELERMTREPSDVLEEMNDRLS 1556
            + +G +R F  LKSVELD+++TSDDE DEMS+GFFEAIEELERMTREPSDVLEEMNDRLS
Sbjct: 60   VKQGSIRGFRALKSVELDQYVTSDDEEDEMSDGFFEAIEELERMTREPSDVLEEMNDRLS 119

Query: 1555 VRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMVSLMCSWVKKLIEEXXXX 1376
             RELQLVLVYFSQ+GRDSWCALEVFDWLRKENRVDKETMELMV++MC WVKKLI+E    
Sbjct: 120  ARELQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQEHHGV 179

Query: 1375 XXXXXXXXXXXXVKKLIEEKNEXXXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMREKDG 1196
                        V  L++                   L+P FSMIEKVISLY+EM EK+G
Sbjct: 180  VGDV--------VDLLVD--------------MDCVGLRPGFSMIEKVISLYWEMGEKEG 217

Query: 1195 AVLFVKEILRRGISYSDDDGQGPKGGPTGYLAWKMMEEGNYKDAIKLVIDFKESDLKPEV 1016
            AVLFV+E+LRRGI Y ++D +G KGGPTGYLAWKMM EG+Y  A++LVI F ES LKPEV
Sbjct: 218  AVLFVEEVLRRGIPYLEEDEEGHKGGPTGYLAWKMMAEGDYTSAVRLVIHFTESGLKPEV 277

Query: 1015 YSYLIAMTAVVKELNELAKALRKLKSFRKAGLISELDGKNVQLIEEYQSDLIADGVRLSD 836
            YSYL+AMTAVVKELNELAKALRKLKSF + GL++ELD ++V+L E+YQSDL+ DGVRLS+
Sbjct: 278  YSYLVAMTAVVKELNELAKALRKLKSFARTGLVAELDLEDVELTEKYQSDLLGDGVRLSN 337

Query: 835  WVIQQGGPSLQGVVLERLLAMYICAGQGLEAERQLWEMKLVGKEADGNLYDMVLAICASQ 656
            W IQ G PSL G++ ERLLAMYICAG G+EAE+QLWEMKLVGKEADG+LYD+VLAICASQ
Sbjct: 338  WAIQDGSPSLHGIIHERLLAMYICAGHGIEAEKQLWEMKLVGKEADGDLYDIVLAICASQ 397

Query: 655  NESNAISRLLTRVEATSSLRKKKTLSWLLRGYIKGGHYSDAAETVIKMLNLGLSPDFLDR 476
             ESNA +RLLTR+E  SS +KKK+LSWLLRGYIKGGH+++AAET++KML+LG  P++LDR
Sbjct: 398  KESNATARLLTRLEVASSPQKKKSLSWLLRGYIKGGHFNEAAETIMKMLDLGFYPEYLDR 457

Query: 475  AAVLQGLRKRIQQSGNVETYLKLCKHLSDASLIGPCLVYMYLKRYKLWITKMI 317
            AAVLQGLRKRIQQ GN++TY++LCK LSDA+LIGPCLV++Y+++YKLW+ KM+
Sbjct: 458  AAVLQGLRKRIQQYGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 510


>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic-like [Glycine max]
          Length = 508

 Score =  658 bits (1697), Expect = 0.0
 Identities = 330/486 (67%), Positives = 395/486 (81%)
 Frame = -3

Query: 1774 SGTLCSLKTHNSVVLNRGKVREFGFLKSVELDKFITSDDEDEMSEGFFEAIEELERMTRE 1595
            S   C  K  + V    G +R F  LKSVE+D+++TS+DE  MS+GFFEAIEELERMTRE
Sbjct: 48   SARSCKFKNPSFVSAKHGSLRGFRALKSVEMDQYVTSNDE--MSDGFFEAIEELERMTRE 105

Query: 1594 PSDVLEEMNDRLSVRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMVSLMC 1415
            PSDVLEEMNDRLS RELQLVLVYFSQ+GRDSWCALEVFDWLRKENRVDKETMELMV++MC
Sbjct: 106  PSDVLEEMNDRLSARELQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMC 165

Query: 1414 SWVKKLIEEXXXXXXXXXXXXXXXXVKKLIEEKNEXXXXXXXXXXXXXXXLKPSFSMIEK 1235
             WVKKLI++                V                        L+P FSMIEK
Sbjct: 166  GWVKKLIQQQHGVGDVVDLLVDMDCV-----------------------GLRPGFSMIEK 202

Query: 1234 VISLYFEMREKDGAVLFVKEILRRGISYSDDDGQGPKGGPTGYLAWKMMEEGNYKDAIKL 1055
            VISLY+EM EK+GAVLFV+E+LRRGI Y ++D +G KGGPTGYLAWKMM EG+Y++A++L
Sbjct: 203  VISLYWEMGEKEGAVLFVEEVLRRGIPYVEEDEEGHKGGPTGYLAWKMMAEGDYRNAVRL 262

Query: 1054 VIDFKESDLKPEVYSYLIAMTAVVKELNELAKALRKLKSFRKAGLISELDGKNVQLIEEY 875
            VI F+ES LKPE+YSYL+AMTAVVKELNE AKALRKLK F +AGL++ELD ++V+L E+Y
Sbjct: 263  VIRFRESGLKPEIYSYLVAMTAVVKELNEFAKALRKLKGFTRAGLVAELDLEDVELTEKY 322

Query: 874  QSDLIADGVRLSDWVIQQGGPSLQGVVLERLLAMYICAGQGLEAERQLWEMKLVGKEADG 695
            QSD +ADGVRLS+WVIQ G PSL G+V ERLLAMYICAG G+EAERQLWEMKLVGKEADG
Sbjct: 323  QSDTLADGVRLSNWVIQDGSPSLHGIVHERLLAMYICAGHGIEAERQLWEMKLVGKEADG 382

Query: 694  NLYDMVLAICASQNESNAISRLLTRVEATSSLRKKKTLSWLLRGYIKGGHYSDAAETVIK 515
            +LYD+VLAICASQ ESNA +RLLTR+E  SS +KKK+LSWLLRGYIKGGH+++AAET++K
Sbjct: 383  DLYDIVLAICASQKESNATARLLTRLEVVSSPQKKKSLSWLLRGYIKGGHFNEAAETIMK 442

Query: 514  MLNLGLSPDFLDRAAVLQGLRKRIQQSGNVETYLKLCKHLSDASLIGPCLVYMYLKRYKL 335
            ML LG  P++LDRAAVLQGLRKRIQQ GN++TY++LCK LSDA+LIGPCLV++Y+++YKL
Sbjct: 443  MLELGFYPEYLDRAAVLQGLRKRIQQYGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKL 502

Query: 334  WITKMI 317
            W+ KM+
Sbjct: 503  WVVKML 508