BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009151
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...    75   2e-11
emb|CBI33811.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...    72   2e-10
ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...    71   4e-10
gb|AFK45334.1| unknown [Medicago truncatula]                           70   5e-10

>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 43/61 (70%)
 Frame = +3

Query: 705 LQMHVDHEADLVDASVQXXXXXXXXXXXXGRWARVTFKIVLSYNGGSFDGWQKQPGLNTV 884
           ++ H  H+ ++V+AS +            GRWAR+TFKIVLSY+G SFDGWQKQPGLNTV
Sbjct: 74  IETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTV 133

Query: 885 Q 887
           Q
Sbjct: 134 Q 134



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = +2

Query: 158 HVHYNHTDACQFTRWNARESYHFMYAARSWKKVNDFYSQLVLGNVS 295
           +VHY HT   +F+RW ARES+ FMY  R W++V DFYS +V G  S
Sbjct: 23  YVHYTHTHPTKFSRWTARESHQFMY-KRPWQQVLDFYSNVVTGRCS 67


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 43/61 (70%)
 Frame = +3

Query: 705 LQMHVDHEADLVDASVQXXXXXXXXXXXXGRWARVTFKIVLSYNGGSFDGWQKQPGLNTV 884
           ++ H  H+ ++V+AS +            GRWAR+TFKIVLSY+G SFDGWQKQPGLNTV
Sbjct: 74  IETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTV 133

Query: 885 Q 887
           Q
Sbjct: 134 Q 134



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = +2

Query: 158 HVHYNHTDACQFTRWNARESYHFMYAARSWKKVNDFYSQLVLGNVS 295
           +VHY HT   +F+RW ARES+ FMY  R W++V DFYS +V G  S
Sbjct: 23  YVHYTHTHPTKFSRWTARESHQFMY-KRPWQQVLDFYSNVVTGRCS 67


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 443

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/78 (42%), Positives = 49/78 (62%)
 Frame = +2

Query: 83  AAPIWSRVLEHMTEARAMTSISESSHVHYNHTDACQFTRWNARESYHFMYAARSWKKVND 262
           A P+ +R  +     +  T      + HYNHTD+C+  RW ARES+ FMY AR W++V+D
Sbjct: 9   AKPLANRYQQMEKLTQTETKTQNKIYFHYNHTDSCKSFRWTARESFQFMY-ARPWQEVSD 67

Query: 263 FYSQLVLGNVSFSDTFKT 316
           FYS +V G +SF + F++
Sbjct: 68  FYSNVVNGRLSFLELFRS 85



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
 Frame = +3

Query: 693 RTSFL-----QMH-VDHEADLVDASVQXXXXXXXXXXXXGRWARVTFKIVLSYNGGSFDG 854
           R SFL     QMH V  +A + + S +            GRWARV FKI LSY+GGSFDG
Sbjct: 76  RLSFLELFRSQMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDG 135

Query: 855 WQKQPGLNTVQ 887
           WQKQPGLNTVQ
Sbjct: 136 WQKQPGLNTVQ 146


>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +3

Query: 792 GRWARVTFKIVLSYNGGSFDGWQKQPGLNTVQ 887
           GRWARVTFKIVLSY+GGSFDGWQKQPGLNTVQ
Sbjct: 100 GRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQ 131



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +2

Query: 134 MTSISESSHVHYNHTDACQFTRWNARESYHFMYAARSWKKVNDFYSQLVLGNVSFSDTFK 313
           M + ++  +V YNHTD+C+F+RW ARES+ FM+ AR W++V DFYS+ V G +S  + F 
Sbjct: 1   MEAQNDKVYVQYNHTDSCKFSRWTARESFQFMH-ARPWQEVVDFYSKSVNGQLSLLELFG 59

Query: 314 TPV 322
           T V
Sbjct: 60  TQV 62


>gb|AFK45334.1| unknown [Medicago truncatula]
          Length = 400

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 34/70 (48%), Positives = 45/70 (64%)
 Frame = +2

Query: 107 LEHMTEARAMTSISESSHVHYNHTDACQFTRWNARESYHFMYAARSWKKVNDFYSQLVLG 286
           +EH +E        +S HVHYNHT   ++ RWNARES+ FMY AR W++VN FYS  V G
Sbjct: 1   MEHQSER-------DSHHVHYNHTHPSKYARWNARESFEFMY-ARPWQRVNHFYSNTVRG 52

Query: 287 NVSFSDTFKT 316
           N+S    F++
Sbjct: 53  NLSLPLLFQS 62



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 792 GRWARVTFKIVLSYNGGSFDGWQKQPGLNTVQ 887
           G+WAR  FKI+LSY+GGSFDGWQKQP LNTVQ
Sbjct: 88  GKWARFNFKILLSYHGGSFDGWQKQPNLNTVQ 119