BLASTX nr result
ID: Cnidium21_contig00009144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009144
(656 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 157 8e-41
ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2... 155 4e-40
ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 1... 152 2e-39
ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arab... 148 6e-39
ref|NP_680156.2| regulator of chromosome condensation repeat-con... 146 2e-38
>ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product
[Vitis vinifera]
Length = 420
Score = 157 bits (397), Expect(2) = 8e-41
Identities = 79/121 (65%), Positives = 95/121 (78%)
Frame = -2
Query: 463 LGFQFWCKRCISSEAQKSRRVAAVWGNGDYGRLGLGSLESQWRPVNISSFGDQNVCQIAC 284
LGF C+R SSE +K R AA+WGNGD+GRLGLGSLESQWRP S+F ++ IAC
Sbjct: 19 LGF---CRRLSSSEPRK--RFAALWGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIAC 73
Query: 283 GGAHTLFLTESGRVYSTGLNDFGQLGSSDDISYTTDPIEISGLPKEIAKVSAGYSHSSAI 104
GGAHTLFLTESG VY+ GLNDFGQLG S D +YTT+P+E+S LPK+I ++AGY HS+AI
Sbjct: 74 GGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAI 133
Query: 103 T 101
T
Sbjct: 134 T 134
Score = 35.8 bits (81), Expect(2) = 8e-41
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 56 IIVDGDLYMWGKNSSGQL 3
I DG+LYMWGKNS+GQL
Sbjct: 133 ITADGELYMWGKNSNGQL 150
>ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1|
predicted protein [Populus trichocarpa]
Length = 419
Score = 155 bits (392), Expect(2) = 4e-40
Identities = 78/126 (61%), Positives = 99/126 (78%), Gaps = 3/126 (2%)
Frame = -2
Query: 469 GSLGFQFWCKRCISSEAQKSR-RVAAVWGNGDYGRLGLGSLESQWRP--VNISSFGDQNV 299
G LG+ + KR +SS + + R R AAVWGNGDYGRLG G+L+S WRP +N SSF + N+
Sbjct: 10 GGLGYCY--KRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNL 67
Query: 298 CQIACGGAHTLFLTESGRVYSTGLNDFGQLGSSDDISYTTDPIEISGLPKEIAKVSAGYS 119
I+CGGAHTLFLTE+GRVY+TGLNDFGQLG S++ +Y +P+E+SGL KEI ++SAGY
Sbjct: 68 KSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQISAGYH 127
Query: 118 HSSAIT 101
HS AIT
Sbjct: 128 HSCAIT 133
Score = 35.4 bits (80), Expect(2) = 4e-40
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1
Query: 68 SCITIIVDGDLYMWGKNSSGQL 3
SC I VDG+LY WGKNS+GQL
Sbjct: 129 SC-AITVDGELYTWGKNSNGQL 149
>ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis] gi|223545242|gb|EEF46749.1|
Williams-Beuren syndrome chromosome region 16 protein,
putative [Ricinus communis]
Length = 374
Score = 152 bits (383), Expect(2) = 2e-39
Identities = 76/116 (65%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Frame = -2
Query: 442 KRCISSEAQKSRRVAAVWGNGDYGRLGLGSLESQWRPVNI--SSFGDQNVCQIACGGAHT 269
+R +SSEA K R AAVWGNGD+GRLG GSL+SQWRP + S F + ++ IACGGAHT
Sbjct: 11 RRWMSSEAGK--RYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHT 68
Query: 268 LFLTESGRVYSTGLNDFGQLGSSDDISYTTDPIEISGLPKEIAKVSAGYSHSSAIT 101
LFLTE+G VY+TGLNDFGQLG S ++SYTT+P+++SGL KEI ++SAGY HS AIT
Sbjct: 69 LFLTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAIT 124
Score = 36.6 bits (83), Expect(2) = 2e-39
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1
Query: 68 SCITIIVDGDLYMWGKNSSGQL 3
SC I VDG+LYMWG+NS+GQL
Sbjct: 120 SC-AITVDGELYMWGRNSNGQL 140
>ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata] gi|297319215|gb|EFH49637.1| hypothetical protein
ARALYDRAFT_487713 [Arabidopsis lyrata subsp. lyrata]
Length = 434
Score = 148 bits (374), Expect(2) = 6e-39
Identities = 78/145 (53%), Positives = 101/145 (69%)
Frame = -2
Query: 535 PYGLLNMLRRSRDFLKLSKHRNGSLGFQFWCKRCISSEAQKSRRVAAVWGNGDYGRLGLG 356
P + S FLK SK G +G C+R +S+E+ K R AA+WG+GDYGRLGLG
Sbjct: 12 PVSRIQGSNNSSGFLKDSKL--GPIGVS--CRRWLSNESGK--RFAAMWGSGDYGRLGLG 65
Query: 355 SLESQWRPVNISSFGDQNVCQIACGGAHTLFLTESGRVYSTGLNDFGQLGSSDDISYTTD 176
+L+SQW P S+ D ++ +ACGGAHTLFLTE+ RV++TGLND GQLG SD S+ D
Sbjct: 66 NLDSQWTPAGCSALSDHSIRAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMD 125
Query: 175 PIEISGLPKEIAKVSAGYSHSSAIT 101
P+E+SGL K+I +SAGY HS+AIT
Sbjct: 126 PLEVSGLDKDILHISAGYYHSAAIT 150
Score = 38.5 bits (88), Expect(2) = 6e-39
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 56 IIVDGDLYMWGKNSSGQL 3
I VDG+LYMWGKNSSGQL
Sbjct: 149 ITVDGELYMWGKNSSGQL 166
>ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana] gi|26452773|dbj|BAC43467.1|
unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance
protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome
condensation repeat-containing protein [Arabidopsis
thaliana]
Length = 434
Score = 146 bits (369), Expect(2) = 2e-38
Identities = 70/115 (60%), Positives = 89/115 (77%)
Frame = -2
Query: 445 CKRCISSEAQKSRRVAAVWGNGDYGRLGLGSLESQWRPVNISSFGDQNVCQIACGGAHTL 266
C R +SSE+ K R AA+WG+GDYGRLGLG+L+SQW P S+ D ++ +ACGGAHTL
Sbjct: 38 CSRWVSSESGK--RFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTL 95
Query: 265 FLTESGRVYSTGLNDFGQLGSSDDISYTTDPIEISGLPKEIAKVSAGYSHSSAIT 101
FLTE+ RV++TGLND GQLG SD S+ DP+E+SGL K+I +SAGY HS+AIT
Sbjct: 96 FLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAIT 150
Score = 38.5 bits (88), Expect(2) = 2e-38
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 56 IIVDGDLYMWGKNSSGQL 3
I VDG+LYMWGKNSSGQL
Sbjct: 149 ITVDGELYMWGKNSSGQL 166